RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 MRC1P22897 1456 aa20.57■□□□□ 0.88
CCNDBP1-203ENST00000562553 ZBTB7AO95365 584 aa20.57■□□□□ 0.88
CCNDBP1-203ENST00000562553 MYBBP1AQ9BQG0 1328 aaKnown RBP20.56■□□□□ 0.88
CCNDBP1-203ENST00000562553 RNMTO43148 476 aaKnown RBP20.56■□□□□ 0.88
CCNDBP1-203ENST00000562553 C4BP0C0L5 1744 aa20.56■□□□□ 0.88
CCNDBP1-203ENST00000562553 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
CCNDBP1-203ENST00000562553 SIK1P57059 783 aa20.55■□□□□ 0.88
CCNDBP1-203ENST00000562553 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
CCNDBP1-203ENST00000562553 GAS2L2Q8NHY3 880 aa20.55■□□□□ 0.88
CCNDBP1-203ENST00000562553 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
CCNDBP1-203ENST00000562553 FCHSD2O94868 740 aa20.54■□□□□ 0.88
CCNDBP1-203ENST00000562553 SGIP1Q9BQI5 828 aa20.54■□□□□ 0.88
CCNDBP1-203ENST00000562553 MAP3K5Q99683 1374 aa20.54■□□□□ 0.88
CCNDBP1-203ENST00000562553 PRKRIP1Q9H875 184 aaPredicted RBP20.53■□□□□ 0.88
CCNDBP1-203ENST00000562553 SLC52A2Q9HAB3 445 aa20.53■□□□□ 0.88
CCNDBP1-203ENST00000562553 ATF5Q9Y2D1 282 aaPredicted RBP20.53■□□□□ 0.88
CCNDBP1-203ENST00000562553 PNPLA7Q6ZV29 1317 aa20.53■□□□□ 0.88
CCNDBP1-203ENST00000562553 SIPA1L3O60292 1781 aaPredicted RBP20.52■□□□□ 0.88
CCNDBP1-203ENST00000562553 ZNF831Q5JPB2 1677 aa20.52■□□□□ 0.88
CCNDBP1-203ENST00000562553 DCAF8L1A6NGE4 600 aa20.52■□□□□ 0.88
CCNDBP1-203ENST00000562553 ITPK1Q13572 414 aa20.52■□□□□ 0.88
CCNDBP1-203ENST00000562553 SLC4A9Q96Q91 983 aa20.52■□□□□ 0.88
CCNDBP1-203ENST00000562553 UBR3Q6ZT12 1888 aa20.52■□□□□ 0.87
CCNDBP1-203ENST00000562553 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
CCNDBP1-203ENST00000562553 COL5A3P25940 1745 aaPredicted RBP20.51■□□□□ 0.87
CCNDBP1-203ENST00000562553 LINC00116Q8NCU8 138 aa20.51■□□□□ 0.87
CCNDBP1-203ENST00000562553 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
CCNDBP1-203ENST00000562553 GNAT3A8MTJ3 354 aa20.5■□□□□ 0.87
CCNDBP1-203ENST00000562553 ATP6V1AP38606 617 aa20.5■□□□□ 0.87
CCNDBP1-203ENST00000562553 IL17REQ8NFR9 667 aa20.5■□□□□ 0.87
CCNDBP1-203ENST00000562553 RBM42Q9BTD8 480 aaKnown RBP20.5■□□□□ 0.87
CCNDBP1-203ENST00000562553 COL24A1Q17RW2 1714 aa20.5■□□□□ 0.87
CCNDBP1-203ENST00000562553 TJP1Q07157 1748 aa20.49■□□□□ 0.87
CCNDBP1-203ENST00000562553 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
CCNDBP1-203ENST00000562553 UBR2Q8IWV8 1755 aa20.47■□□□□ 0.87
CCNDBP1-203ENST00000562553 PTCD1O75127 700 aaKnown RBP20.47■□□□□ 0.87
CCNDBP1-203ENST00000562553 SLC39A6Q13433 755 aa20.47■□□□□ 0.87
CCNDBP1-203ENST00000562553 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
CCNDBP1-203ENST00000562553 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
CCNDBP1-203ENST00000562553 SYT17Q9BSW7 474 aa20.47■□□□□ 0.87
CCNDBP1-203ENST00000562553 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 MYH14Q7Z406 1995 aaKnown RBP20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 CICQ96RK0 1608 aaPredicted RBP20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 YY1P25490 414 aa20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 SMIM5Q71RC9 77 aa20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 AK7Q96M32 723 aa20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 KCPQ6ZWJ8 1503 aa20.46■□□□□ 0.87
CCNDBP1-203ENST00000562553 COL23A1Q86Y22 540 aaPredicted RBP20.45■□□□□ 0.86
CCNDBP1-203ENST00000562553 FHDC1Q9C0D6 1143 aaPredicted RBP20.45■□□□□ 0.86
CCNDBP1-203ENST00000562553 ARXQ96QS3 562 aa20.44■□□□□ 0.86
CCNDBP1-203ENST00000562553 TEFQ10587 303 aa20.43■□□□□ 0.86
CCNDBP1-203ENST00000562553 HMGB2P26583 209 aaKnown RBP20.42■□□□□ 0.86
CCNDBP1-203ENST00000562553 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
CCNDBP1-203ENST00000562553 MCM10Q7L590 875 aa20.42■□□□□ 0.86
CCNDBP1-203ENST00000562553 GNPATO15228 680 aa20.41■□□□□ 0.86
CCNDBP1-203ENST00000562553 MSH5O43196 834 aa20.41■□□□□ 0.86
CCNDBP1-203ENST00000562553 PHF14O94880 888 aa20.41■□□□□ 0.86
CCNDBP1-203ENST00000562553 NEFMP07197 916 aa20.4■□□□□ 0.86
CCNDBP1-203ENST00000562553 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
CCNDBP1-203ENST00000562553 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
CCNDBP1-203ENST00000562553 MAPK8IP3Q9UPT6 1336 aa20.39■□□□□ 0.85
CCNDBP1-203ENST00000562553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.39■□□□□ 0.85
CCNDBP1-203ENST00000562553 NFE2L2Q16236 605 aa20.39■□□□□ 0.85
CCNDBP1-203ENST00000562553 CHD4Q14839 1912 aa20.38■□□□□ 0.85
CCNDBP1-203ENST00000562553 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
CCNDBP1-203ENST00000562553 SSFA2P28290 1259 aa20.38■□□□□ 0.85
CCNDBP1-203ENST00000562553 DNAJC10Q8IXB1 793 aa20.38■□□□□ 0.85
CCNDBP1-203ENST00000562553 FLAD1Q8NFF5 587 aa20.38■□□□□ 0.85
CCNDBP1-203ENST00000562553 PNNQ9H307 717 aaKnown RBP20.38■□□□□ 0.85
CCNDBP1-203ENST00000562553 C4AP0C0L4 1744 aa20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 UTRNP46939 3433 aa20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 RC3H1Q5TC82 1133 aaKnown RBP20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 MSL1Q68DK7 614 aa20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 ZNF790Q6PG37 636 aa20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
CCNDBP1-203ENST00000562553 KCNQ3O43525 872 aa20.36■□□□□ 0.85
CCNDBP1-203ENST00000562553 POLD1P28340 1107 aa20.36■□□□□ 0.85
CCNDBP1-203ENST00000562553 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
CCNDBP1-203ENST00000562553 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
CCNDBP1-203ENST00000562553 TTC5Q8N0Z6 440 aa20.36■□□□□ 0.85
CCNDBP1-203ENST00000562553 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
CCNDBP1-203ENST00000562553 ZNF496Q96IT1 587 aaPredicted RBP20.35■□□□□ 0.85
CCNDBP1-203ENST00000562553 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
CCNDBP1-203ENST00000562553 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
CCNDBP1-203ENST00000562553 RTCBQ9Y3I0 505 aaKnown RBP20.34■□□□□ 0.85
CCNDBP1-203ENST00000562553 RPS6KA4O75676 772 aa20.33■□□□□ 0.85
CCNDBP1-203ENST00000562553 CYP19A1P11511 503 aaPredicted RBP20.33■□□□□ 0.85
CCNDBP1-203ENST00000562553 INTS5Q6P9B9 1019 aaKnown RBP20.33■□□□□ 0.85
CCNDBP1-203ENST00000562553 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
CCNDBP1-203ENST00000562553 KDM3BQ7LBC6 1761 aa20.33■□□□□ 0.84
CCNDBP1-203ENST00000562553 HEG1Q9ULI3 1381 aa20.33■□□□□ 0.84
CCNDBP1-203ENST00000562553 ANP32CO43423 234 aa20.31■□□□□ 0.84
CCNDBP1-203ENST00000562553 TMPOP42166 694 aaKnown RBP20.31■□□□□ 0.84
CCNDBP1-203ENST00000562553 RUNDC1Q96C34 613 aa20.31■□□□□ 0.84
CCNDBP1-203ENST00000562553 CCDC87Q9NVE4 849 aa20.31■□□□□ 0.84
CCNDBP1-203ENST00000562553 RRP7AQ9Y3A4 280 aaKnown RBP20.31■□□□□ 0.84
CCNDBP1-203ENST00000562553 RIPK4P57078 832 aa20.3■□□□□ 0.84
CCNDBP1-203ENST00000562553 TRAPPC3LQ5T215 181 aa20.3■□□□□ 0.84
CCNDBP1-203ENST00000562553 ARHGEF1Q92888 912 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms