RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
SNX29-201ENST00000562510 BCL9LQ86UU0 1499 aa10.15□□□□□ -0.78
SNX29-201ENST00000562510 ANKARQ7Z5J8 1434 aa10.15□□□□□ -0.79
SNX29-201ENST00000562510 NUTM2FA1L443 756 aa10.14□□□□□ -0.79
SNX29-201ENST00000562510 BLMP54132 1417 aaPredicted RBP10.14□□□□□ -0.79
SNX29-201ENST00000562510 USP32Q8NFA0 1604 aa10.14□□□□□ -0.79
SNX29-201ENST00000562510 CDC42BPGQ6DT37 1551 aa10.14□□□□□ -0.79
SNX29-201ENST00000562510 BRD4O60885 1362 aaPredicted RBP10.14□□□□□ -0.79
SNX29-201ENST00000562510 NSD2O96028 1365 aa10.14□□□□□ -0.79
SNX29-201ENST00000562510 FYB1O15117 783 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 PPP2R1AP30153 589 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 PROX2Q3B8N5 592 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 ESCO1Q5FWF5 840 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 UNC5CLQ8IV45 518 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 SLC4A5Q9BY07 1137 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
SNX29-201ENST00000562510 ACEP12821 1306 aa10.12□□□□□ -0.79
SNX29-201ENST00000562510 FOXO3O43524 673 aa10.12□□□□□ -0.79
SNX29-201ENST00000562510 SF3B2Q13435 895 aaKnown RBP10.12□□□□□ -0.79
SNX29-201ENST00000562510 SMYD5Q6GMV2 418 aa10.12□□□□□ -0.79
SNX29-201ENST00000562510 MORC1Q86VD1 984 aa10.12□□□□□ -0.79
SNX29-201ENST00000562510 CDHR5Q9HBB8 845 aa10.12□□□□□ -0.79
SNX29-201ENST00000562510 EDC4Q6P2E9 1401 aaKnown RBP10.12□□□□□ -0.79
SNX29-201ENST00000562510 TOPAZ1Q8N9V7 1692 aa10.12□□□□□ -0.79
SNX29-201ENST00000562510 FMN2Q9NZ56 1722 aa10.11□□□□□ -0.79
SNX29-201ENST00000562510 PMFBP1Q8TBY8 1022 aa10.11□□□□□ -0.79
SNX29-201ENST00000562510 RNF166Q96A37 237 aaPredicted RBP10.11□□□□□ -0.79
SNX29-201ENST00000562510 POLR3AO14802 1390 aaPredicted RBP10.11□□□□□ -0.79
SNX29-201ENST00000562510 TESPA1A2RU30 521 aaPredicted RBP10.1□□□□□ -0.79
SNX29-201ENST00000562510 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
SNX29-201ENST00000562510 NGDNQ8NEJ9 315 aaKnown RBP10.1□□□□□ -0.79
SNX29-201ENST00000562510 PNISRQ8TF01 805 aaKnown RBP10.1□□□□□ -0.79
SNX29-201ENST00000562510 YTHDC1Q96MU7 727 aaKnown RBP10.1□□□□□ -0.79
SNX29-201ENST00000562510 GGNBP2Q9H3C7 697 aa10.1□□□□□ -0.79
SNX29-201ENST00000562510 EP400Q96L91 3159 aa10.1□□□□□ -0.79
SNX29-201ENST00000562510 TTC21BQ7Z4L5 1316 aa10.09□□□□□ -0.79
SNX29-201ENST00000562510 SSH2Q76I76 1423 aa10.09□□□□□ -0.79
SNX29-201ENST00000562510 HRO43593 1189 aa10.09□□□□□ -0.79
SNX29-201ENST00000562510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.09□□□□□ -0.79
SNX29-201ENST00000562510 NBPF3Q9H094 633 aa10.09□□□□□ -0.79
SNX29-201ENST00000562510 SPATA31A3Q5VYP0 1347 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 USP6P35125 1406 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 ITSN1Q15811 1721 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 VPS72Q15906 364 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 DEFB132Q7Z7B7 95 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 NME9Q86XW9 330 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 FAM9BQ8IZU0 186 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
SNX29-201ENST00000562510 PXDNQ92626 1479 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 AKAP12Q02952 1782 aa10.08□□□□□ -0.8
SNX29-201ENST00000562510 SLIT2O94813 1529 aa10.07□□□□□ -0.8
SNX29-201ENST00000562510 MON2Q7Z3U7 1717 aa10.07□□□□□ -0.8
SNX29-201ENST00000562510 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
SNX29-201ENST00000562510 XPCQ01831 940 aaPredicted RBP10.07□□□□□ -0.8
SNX29-201ENST00000562510 KIAA1468Q9P260 1216 aa10.07□□□□□ -0.8
SNX29-201ENST00000562510 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
SNX29-201ENST00000562510 COL22A1Q8NFW1 1626 aaPredicted RBP10.07□□□□□ -0.8
SNX29-201ENST00000562510 TTC21AQ8NDW8 1320 aa10.07□□□□□ -0.8
SNX29-201ENST00000562510 RGPD8O14715 1765 aaPredicted RBP10.06□□□□□ -0.8
SNX29-201ENST00000562510 TULP1O00294 542 aaPredicted RBP10.06□□□□□ -0.8
SNX29-201ENST00000562510 TNNT2P45379 298 aaPredicted RBP10.06□□□□□ -0.8
SNX29-201ENST00000562510 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
SNX29-201ENST00000562510 CDCA7LQ96GN5 454 aa10.06□□□□□ -0.8
SNX29-201ENST00000562510 MTHFSP49914 203 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 PRSS12P56730 875 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 PSME1Q06323 249 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 KRT28Q7Z3Y7 464 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 PACS2Q86VP3 889 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 COG3Q96JB2 828 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 NRKQ7Z2Y5 1582 aa10.05□□□□□ -0.8
SNX29-201ENST00000562510 USP31Q70CQ4 1352 aa10.04□□□□□ -0.8
SNX29-201ENST00000562510 BAG6P46379 1132 aa10.04□□□□□ -0.8
SNX29-201ENST00000562510 RBM26Q5T8P6 1007 aaKnown RBP10.04□□□□□ -0.8
SNX29-201ENST00000562510 KIF20BQ96Q89 1820 aa10.03□□□□□ -0.8
SNX29-201ENST00000562510 BHMG1C9JSJ3 638 aaPredicted RBP10.03□□□□□ -0.8
SNX29-201ENST00000562510 KCTD12Q96CX2 325 aaKnown RBP10.03□□□□□ -0.8
SNX29-201ENST00000562510 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
SNX29-201ENST00000562510 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
SNX29-201ENST00000562510 ANKRD26Q9UPS8 1709 aa10.03□□□□□ -0.8
SNX29-201ENST00000562510 INSRP06213 1382 aa10.02□□□□□ -0.8
SNX29-201ENST00000562510 AATKQ6ZMQ8 1374 aa10.02□□□□□ -0.8
SNX29-201ENST00000562510 OVOS2A0A0J9YW53 1432 aa10.02□□□□□ -0.81
SNX29-201ENST00000562510 OVOS2Q6IE36 1432 aa10.02□□□□□ -0.81
SNX29-201ENST00000562510 CENPBP07199 599 aaPredicted RBP10.02□□□□□ -0.81
SNX29-201ENST00000562510 CFAP53Q96M91 514 aa10.02□□□□□ -0.81
SNX29-201ENST00000562510 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.81
SNX29-201ENST00000562510 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNX29-201ENST00000562510 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNX29-201ENST00000562510 NPDC1Q9NQX5 325 aaPredicted RBP10.01□□□□□ -0.81
SNX29-201ENST00000562510 POLKQ9UBT6 870 aa10.01□□□□□ -0.81
SNX29-201ENST00000562510 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
SNX29-201ENST00000562510 SBNO1A3KN83 1393 aa10.01□□□□□ -0.81
SNX29-201ENST00000562510 ARHGEF10O15013 1369 aa10.01□□□□□ -0.81
SNX29-201ENST00000562510 FAM83GA6ND36 823 aa10□□□□□ -0.81
SNX29-201ENST00000562510 FCHSD2O94868 740 aa10□□□□□ -0.81
SNX29-201ENST00000562510 FBLN1P23142 703 aa10□□□□□ -0.81
SNX29-201ENST00000562510 PADI6Q6TGC4 694 aa10□□□□□ -0.81
SNX29-201ENST00000562510 ABTB2Q8N961 1025 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms