RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 FHDC1Q9C0D6 1143 aaPredicted RBP23.93■■□□□ 1.42
CMTM3-204ENST00000562357 NUDCQ9Y266 331 aa23.93■■□□□ 1.42
CMTM3-204ENST00000562357 COL3A1P02461 1466 aaPredicted RBP23.93■■□□□ 1.42
CMTM3-204ENST00000562357 C4BP0C0L5 1744 aa23.92■■□□□ 1.42
CMTM3-204ENST00000562357 TUBGCP6Q96RT7 1819 aa23.91■■□□□ 1.42
CMTM3-204ENST00000562357 PHF14O94880 888 aa23.9■■□□□ 1.42
CMTM3-204ENST00000562357 PPP2R1AP30153 589 aa23.9■■□□□ 1.42
CMTM3-204ENST00000562357 NFATC2IPQ8NCF5 419 aa23.9■■□□□ 1.42
CMTM3-204ENST00000562357 LINC00116Q8NCU8 138 aa23.9■■□□□ 1.42
CMTM3-204ENST00000562357 TAF1LQ8IZX4 1826 aa23.89■■□□□ 1.42
CMTM3-204ENST00000562357 GNPATO15228 680 aa23.89■■□□□ 1.41
CMTM3-204ENST00000562357 KLHL34Q8N239 644 aa23.89■■□□□ 1.41
CMTM3-204ENST00000562357 SYT17Q9BSW7 474 aa23.89■■□□□ 1.41
CMTM3-204ENST00000562357 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.88■■□□□ 1.41
CMTM3-204ENST00000562357 SSFA2P28290 1259 aa23.88■■□□□ 1.41
CMTM3-204ENST00000562357 ITPK1Q13572 414 aa23.88■■□□□ 1.41
CMTM3-204ENST00000562357 MTHFSDQ2M296 383 aaKnown RBP23.88■■□□□ 1.41
CMTM3-204ENST00000562357 GAS2L2Q8NHY3 880 aa23.88■■□□□ 1.41
CMTM3-204ENST00000562357 MSL1Q68DK7 614 aa23.86■■□□□ 1.41
CMTM3-204ENST00000562357 SLC52A2Q9HAB3 445 aa23.86■■□□□ 1.41
CMTM3-204ENST00000562357 MAP3K5Q99683 1374 aa23.86■■□□□ 1.41
CMTM3-204ENST00000562357 RNMTO43148 476 aaKnown RBP23.85■■□□□ 1.41
CMTM3-204ENST00000562357 PTCD1O75127 700 aaKnown RBP23.85■■□□□ 1.41
CMTM3-204ENST00000562357 U2AF1L5P0DN76 240 aaPredicted RBP23.84■■□□□ 1.41
CMTM3-204ENST00000562357 U2AF1Q01081 240 aaKnown RBP eCLIP23.84■■□□□ 1.41
CMTM3-204ENST00000562357 RTCBQ9Y3I0 505 aaKnown RBP23.84■■□□□ 1.41
CMTM3-204ENST00000562357 LGR6Q9HBX8 967 aa23.83■■□□□ 1.41
CMTM3-204ENST00000562357 PRKAR2BP31323 418 aa23.82■■□□□ 1.4
CMTM3-204ENST00000562357 SCN11AQ9UI33 1791 aa23.82■■□□□ 1.4
CMTM3-204ENST00000562357 CNTNAP4Q9C0A0 1308 aa23.82■■□□□ 1.4
CMTM3-204ENST00000562357 RC3H1Q5TC82 1133 aaKnown RBP23.81■■□□□ 1.4
CMTM3-204ENST00000562357 ZNF831Q5JPB2 1677 aa23.8■■□□□ 1.4
CMTM3-204ENST00000562357 GNAT3A8MTJ3 354 aa23.8■■□□□ 1.4
CMTM3-204ENST00000562357 SLC4A9Q96Q91 983 aa23.8■■□□□ 1.4
CMTM3-204ENST00000562357 MRC1P22897 1456 aa23.8■■□□□ 1.4
CMTM3-204ENST00000562357 UBR3Q6ZT12 1888 aa23.79■■□□□ 1.4
CMTM3-204ENST00000562357 COL24A1Q17RW2 1714 aa23.79■■□□□ 1.4
CMTM3-204ENST00000562357 ADRA2BP18089 450 aa23.79■■□□□ 1.4
CMTM3-204ENST00000562357 TEFQ10587 303 aa23.79■■□□□ 1.4
CMTM3-204ENST00000562357 TRAPPC3LQ5T215 181 aa23.79■■□□□ 1.4
CMTM3-204ENST00000562357 AMIGO3Q86WK7 504 aa23.79■■□□□ 1.4
CMTM3-204ENST00000562357 NEFMP07197 916 aa23.78■■□□□ 1.4
CMTM3-204ENST00000562357 RSPH6AQ9H0K4 717 aa23.78■■□□□ 1.4
CMTM3-204ENST00000562357 FCHSD2O94868 740 aa23.77■■□□□ 1.4
CMTM3-204ENST00000562357 SMIM5Q71RC9 77 aa23.77■■□□□ 1.4
CMTM3-204ENST00000562357 TTC5Q8N0Z6 440 aa23.77■■□□□ 1.4
CMTM3-204ENST00000562357 RPS6KA4O75676 772 aa23.76■■□□□ 1.39
CMTM3-204ENST00000562357 RFC4P35249 363 aa23.75■■□□□ 1.39
CMTM3-204ENST00000562357 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
CMTM3-204ENST00000562357 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
CMTM3-204ENST00000562357 SLC39A6Q13433 755 aa23.74■■□□□ 1.39
CMTM3-204ENST00000562357 RALBP1Q15311 655 aa23.74■■□□□ 1.39
CMTM3-204ENST00000562357 GPR162Q16538 588 aa23.74■■□□□ 1.39
CMTM3-204ENST00000562357 RTF1Q92541 710 aaKnown RBP23.74■■□□□ 1.39
CMTM3-204ENST00000562357 YY1P25490 414 aa23.73■■□□□ 1.39
CMTM3-204ENST00000562357 PHACTR3Q96KR7 559 aa23.73■■□□□ 1.39
CMTM3-204ENST00000562357 ADAMTS7Q9UKP4 1686 aa23.73■■□□□ 1.39
CMTM3-204ENST00000562357 COL5A3P25940 1745 aaPredicted RBP23.73■■□□□ 1.39
CMTM3-204ENST00000562357 ZEB1P37275 1124 aaPredicted RBP23.72■■□□□ 1.39
CMTM3-204ENST00000562357 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
CMTM3-204ENST00000562357 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
CMTM3-204ENST00000562357 DNAJC10Q8IXB1 793 aa23.71■■□□□ 1.39
CMTM3-204ENST00000562357 NLGN1Q8N2Q7 840 aa23.71■■□□□ 1.39
CMTM3-204ENST00000562357 IL17REQ8NFR9 667 aa23.71■■□□□ 1.39
CMTM3-204ENST00000562357 ARHGEF1Q92888 912 aaKnown RBP23.71■■□□□ 1.39
CMTM3-204ENST00000562357 VSIG10Q8N0Z9 540 aa23.7■■□□□ 1.38
CMTM3-204ENST00000562357 NLGN2Q8NFZ4 835 aa23.69■■□□□ 1.38
CMTM3-204ENST00000562357 PNNQ9H307 717 aaKnown RBP23.69■■□□□ 1.38
CMTM3-204ENST00000562357 CCDC87Q9NVE4 849 aa23.69■■□□□ 1.38
CMTM3-204ENST00000562357 CICQ96RK0 1608 aaPredicted RBP23.69■■□□□ 1.38
CMTM3-204ENST00000562357 TJP1Q07157 1748 aa23.67■■□□□ 1.38
CMTM3-204ENST00000562357 MMP10P09238 476 aa23.67■■□□□ 1.38
CMTM3-204ENST00000562357 ZNF790Q6PG37 636 aa23.67■■□□□ 1.38
CMTM3-204ENST00000562357 VIRMAQ69YN4 1812 aaKnown RBP23.67■■□□□ 1.38
CMTM3-204ENST00000562357 KCPQ6ZWJ8 1503 aa23.67■■□□□ 1.38
CMTM3-204ENST00000562357 CEMIPQ8WUJ3 1361 aa23.66■■□□□ 1.38
CMTM3-204ENST00000562357 STARD3NLO95772 234 aa23.66■■□□□ 1.38
CMTM3-204ENST00000562357 BTBD11A6QL63 1104 aa23.65■■□□□ 1.38
CMTM3-204ENST00000562357 HTATSF1O43719 755 aaKnown RBP23.65■■□□□ 1.38
CMTM3-204ENST00000562357 CYP19A1P11511 503 aaPredicted RBP23.65■■□□□ 1.38
CMTM3-204ENST00000562357 INTS5Q6P9B9 1019 aaKnown RBP23.65■■□□□ 1.38
CMTM3-204ENST00000562357 MAPK8IP3Q9UPT6 1336 aa23.64■■□□□ 1.38
CMTM3-204ENST00000562357 GYS1P13807 737 aa23.64■■□□□ 1.37
CMTM3-204ENST00000562357 FMNL2Q96PY5 1086 aa23.64■■□□□ 1.37
CMTM3-204ENST00000562357 TEX13AQ9BXU3 409 aaPredicted RBP23.64■■□□□ 1.37
CMTM3-204ENST00000562357 ZPR1O75312 459 aa23.63■■□□□ 1.37
CMTM3-204ENST00000562357 PARP3Q9Y6F1 533 aa23.63■■□□□ 1.37
CMTM3-204ENST00000562357 MYBBP1AQ9BQG0 1328 aaKnown RBP23.62■■□□□ 1.37
CMTM3-204ENST00000562357 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
CMTM3-204ENST00000562357 GRIN3BO60391 1043 aa23.62■■□□□ 1.37
CMTM3-204ENST00000562357 MCM10Q7L590 875 aa23.62■■□□□ 1.37
CMTM3-204ENST00000562357 ZNF496Q96IT1 587 aaPredicted RBP23.62■■□□□ 1.37
CMTM3-204ENST00000562357 HEG1Q9ULI3 1381 aa23.62■■□□□ 1.37
CMTM3-204ENST00000562357 MYH14Q7Z406 1995 aaKnown RBP23.61■■□□□ 1.37
CMTM3-204ENST00000562357 SOS1Q07889 1333 aaPredicted RBP23.61■■□□□ 1.37
CMTM3-204ENST00000562357 NPM2Q86SE8 214 aaKnown RBP23.6■■□□□ 1.37
CMTM3-204ENST00000562357 SRP68Q9UHB9 627 aaKnown RBP23.6■■□□□ 1.37
CMTM3-204ENST00000562357 ZBTB1Q9Y2K1 713 aa23.6■■□□□ 1.37
CMTM3-204ENST00000562357 UBR2Q8IWV8 1755 aa23.6■■□□□ 1.37
CMTM3-204ENST00000562357 COL15A1P39059 1388 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms