RNA–Protein interactions for RNA: ENST00000562291.2

INO80E-204, Transcript of INO80 complex subunit E, humanhuman

TSL 3

Gene INO80E, Length 255 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-204ENST00000562291 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
INO80E-204ENST00000562291 MSL1Q68DK7 614 aa13.04□□□□□ -0.32
INO80E-204ENST00000562291 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
INO80E-204ENST00000562291 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
INO80E-204ENST00000562291 LGR6Q9HBX8 967 aa13.03□□□□□ -0.32
INO80E-204ENST00000562291 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.02□□□□□ -0.33
INO80E-204ENST00000562291 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.33
INO80E-204ENST00000562291 GPR162Q16538 588 aa13.02□□□□□ -0.33
INO80E-204ENST00000562291 CFAP53Q96M91 514 aa13.02□□□□□ -0.33
INO80E-204ENST00000562291 KDRP35968 1356 aa13.02□□□□□ -0.33
INO80E-204ENST00000562291 GNPATO15228 680 aa13.01□□□□□ -0.33
INO80E-204ENST00000562291 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
INO80E-204ENST00000562291 SSFA2P28290 1259 aa13.01□□□□□ -0.33
INO80E-204ENST00000562291 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
INO80E-204ENST00000562291 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
INO80E-204ENST00000562291 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
INO80E-204ENST00000562291 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
INO80E-204ENST00000562291 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
INO80E-204ENST00000562291 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
INO80E-204ENST00000562291 AMIGO3Q86WK7 504 aa13□□□□□ -0.33
INO80E-204ENST00000562291 NUDCQ9Y266 331 aa13□□□□□ -0.33
INO80E-204ENST00000562291 RTCBQ9Y3I0 505 aaKnown RBP13□□□□□ -0.33
INO80E-204ENST00000562291 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
INO80E-204ENST00000562291 QSER1Q2KHR3 1735 aa12.99□□□□□ -0.33
INO80E-204ENST00000562291 KDM6AO15550 1401 aaPredicted RBP12.98□□□□□ -0.33
INO80E-204ENST00000562291 MAP3K5Q99683 1374 aa12.98□□□□□ -0.33
INO80E-204ENST00000562291 RPS6KA4O75676 772 aa12.98□□□□□ -0.33
INO80E-204ENST00000562291 PPP2R1AP30153 589 aa12.98□□□□□ -0.33
INO80E-204ENST00000562291 NLGN2Q8NFZ4 835 aa12.98□□□□□ -0.33
INO80E-204ENST00000562291 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
INO80E-204ENST00000562291 C5P01031 1676 aa12.97□□□□□ -0.33
INO80E-204ENST00000562291 SLC39A6Q13433 755 aa12.97□□□□□ -0.33
INO80E-204ENST00000562291 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
INO80E-204ENST00000562291 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
INO80E-204ENST00000562291 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
INO80E-204ENST00000562291 C4BP0C0L5 1744 aa12.96□□□□□ -0.33
INO80E-204ENST00000562291 RFC4P35249 363 aa12.96□□□□□ -0.33
INO80E-204ENST00000562291 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.33
INO80E-204ENST00000562291 GAS2L2Q8NHY3 880 aa12.96□□□□□ -0.33
INO80E-204ENST00000562291 GNAT3A8MTJ3 354 aa12.95□□□□□ -0.34
INO80E-204ENST00000562291 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
INO80E-204ENST00000562291 CRKLP46109 303 aaKnown RBP12.95□□□□□ -0.34
INO80E-204ENST00000562291 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
INO80E-204ENST00000562291 CNTNAP4Q9C0A0 1308 aa12.94□□□□□ -0.34
INO80E-204ENST00000562291 ADRA2BP18089 450 aa12.94□□□□□ -0.34
INO80E-204ENST00000562291 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
INO80E-204ENST00000562291 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
INO80E-204ENST00000562291 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
INO80E-204ENST00000562291 FCHSD2O94868 740 aa12.93□□□□□ -0.34
INO80E-204ENST00000562291 MMP10P09238 476 aa12.93□□□□□ -0.34
INO80E-204ENST00000562291 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
INO80E-204ENST00000562291 TEFQ10587 303 aa12.93□□□□□ -0.34
INO80E-204ENST00000562291 IL17REQ8NFR9 667 aa12.93□□□□□ -0.34
INO80E-204ENST00000562291 INTS5Q6P9B9 1019 aaKnown RBP12.92□□□□□ -0.34
INO80E-204ENST00000562291 TTC5Q8N0Z6 440 aa12.92□□□□□ -0.34
INO80E-204ENST00000562291 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
INO80E-204ENST00000562291 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
INO80E-204ENST00000562291 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
INO80E-204ENST00000562291 GYS1P13807 737 aa12.91□□□□□ -0.34
INO80E-204ENST00000562291 CCDC87Q9NVE4 849 aa12.91□□□□□ -0.34
INO80E-204ENST00000562291 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
INO80E-204ENST00000562291 ZPR1O75312 459 aa12.9□□□□□ -0.34
INO80E-204ENST00000562291 CYP19A1P11511 503 aaPredicted RBP12.9□□□□□ -0.34
INO80E-204ENST00000562291 YBX3P16989 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
INO80E-204ENST00000562291 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
INO80E-204ENST00000562291 RTF1Q92541 710 aaKnown RBP12.9□□□□□ -0.34
INO80E-204ENST00000562291 COL3A1P02461 1466 aaPredicted RBP12.9□□□□□ -0.34
INO80E-204ENST00000562291 SCN11AQ9UI33 1791 aa12.89□□□□□ -0.35
INO80E-204ENST00000562291 NEFMP07197 916 aa12.89□□□□□ -0.35
INO80E-204ENST00000562291 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
INO80E-204ENST00000562291 TEX13AQ9BXU3 409 aaPredicted RBP12.89□□□□□ -0.35
INO80E-204ENST00000562291 SRP68Q9UHB9 627 aaKnown RBP12.89□□□□□ -0.35
INO80E-204ENST00000562291 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
INO80E-204ENST00000562291 STARD3NLO95772 234 aa12.88□□□□□ -0.35
INO80E-204ENST00000562291 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
INO80E-204ENST00000562291 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
INO80E-204ENST00000562291 WWC3Q9ULE0 1092 aa12.88□□□□□ -0.35
INO80E-204ENST00000562291 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
INO80E-204ENST00000562291 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
INO80E-204ENST00000562291 TGFB2P61812 414 aa12.87□□□□□ -0.35
INO80E-204ENST00000562291 FKBP8Q14318 412 aa12.87□□□□□ -0.35
INO80E-204ENST00000562291 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
INO80E-204ENST00000562291 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
INO80E-204ENST00000562291 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
INO80E-204ENST00000562291 USPL1Q5W0Q7 1092 aa12.86□□□□□ -0.35
INO80E-204ENST00000562291 MCM10Q7L590 875 aa12.86□□□□□ -0.35
INO80E-204ENST00000562291 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
INO80E-204ENST00000562291 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
INO80E-204ENST00000562291 ZNF831Q5JPB2 1677 aa12.86□□□□□ -0.35
INO80E-204ENST00000562291 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
INO80E-204ENST00000562291 KCNQ3O43525 872 aa12.85□□□□□ -0.35
INO80E-204ENST00000562291 TM4SF1P30408 202 aa12.85□□□□□ -0.35
INO80E-204ENST00000562291 RALBP1Q15311 655 aa12.85□□□□□ -0.35
INO80E-204ENST00000562291 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
INO80E-204ENST00000562291 ZBTB1Q9Y2K1 713 aa12.85□□□□□ -0.35
INO80E-204ENST00000562291 CHD4Q14839 1912 aa12.85□□□□□ -0.35
INO80E-204ENST00000562291 SOS1Q07889 1333 aaPredicted RBP12.85□□□□□ -0.35
INO80E-204ENST00000562291 A0A087WZG4 1122 aa12.84□□□□□ -0.35
INO80E-204ENST00000562291 DCTN1Q14203 1278 aa12.84□□□□□ -0.35
INO80E-204ENST00000562291 NPM2Q86SE8 214 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms