RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 MPNDQ8N594 471 aa7.09□□□□□ -1.27
CAPN3-211ENST00000562199 SREK1Q8WXA9 508 aaKnown RBP7.09□□□□□ -1.27
CAPN3-211ENST00000562199 KDM4CQ9H3R0 1056 aa7.09□□□□□ -1.27
CAPN3-211ENST00000562199 ATP1B4Q9UN42 357 aaPredicted RBP7.09□□□□□ -1.27
CAPN3-211ENST00000562199 BICRAQ9NZM4 1560 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 ANP32CO43423 234 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 ADH1CP00326 375 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 TIMP2P16035 220 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 ARID4AP29374 1257 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-211ENST00000562199 CLK2P49760 499 aaKnown RBP7.08□□□□□ -1.28
CAPN3-211ENST00000562199 ZNF662Q6ZS27 426 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 SMC5Q8IY18 1101 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
CAPN3-211ENST00000562199 MAGEC2Q9UBF1 373 aaPredicted RBP7.08□□□□□ -1.28
CAPN3-211ENST00000562199 NXF1Q9UBU9 619 aaKnown RBP7.08□□□□□ -1.28
CAPN3-211ENST00000562199 ARAP1Q96P48 1450 aa7.08□□□□□ -1.28
CAPN3-211ENST00000562199 RRBP1Q9P2E9 1410 aaKnown RBP7.08□□□□□ -1.28
CAPN3-211ENST00000562199 SOBPA7XYQ1 873 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 EXOC5O00471 708 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 PEX14O75381 377 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 MAP4K4O95819 1239 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-211ENST00000562199 MRPL14Q6P1L8 145 aaKnown RBP7.07□□□□□ -1.28
CAPN3-211ENST00000562199 BPHLQ86WA6 291 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-211ENST00000562199 HELBQ8NG08 1087 aaPredicted RBP7.07□□□□□ -1.28
CAPN3-211ENST00000562199 SLC16A10Q8TF71 515 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 CDK15Q96Q40 435 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 TSPAN18Q96SJ8 248 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 ZFAND3Q9H8U3 227 aa7.07□□□□□ -1.28
CAPN3-211ENST00000562199 MAGEB6P1A0A0J9YX57 407 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 WIPF1O43516 503 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 ZIC2O95409 532 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-211ENST00000562199 NR3C2P08235 984 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 LIG1P18858 919 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 IRX3P78415 501 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-211ENST00000562199 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 KCNA1Q09470 495 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 SCARF1Q14162 830 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 ZFYVE27Q5T4F4 411 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 WDR78Q5VTH9 848 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
CAPN3-211ENST00000562199 KLF16Q9BXK1 252 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-211ENST00000562199 KIAA1522Q9P206 1035 aaPredicted RBP7.06□□□□□ -1.28
CAPN3-211ENST00000562199 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
CAPN3-211ENST00000562199 PRXQ9BXM0 1461 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 RBM47A0AV96 593 aaKnown RBP7.05□□□□□ -1.28
CAPN3-211ENST00000562199 GOLIM4O00461 696 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 CREB3O43889 395 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 APPP05067 770 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 TCF3P15923 654 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 SSFA2P28290 1259 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 GRM5P41594 1212 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 INSM1Q01101 510 aaPredicted RBP7.05□□□□□ -1.28
CAPN3-211ENST00000562199 CALD1Q05682 793 aaKnown RBP7.05□□□□□ -1.28
CAPN3-211ENST00000562199 C6orf118Q5T5N4 469 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 CLEC4GQ6UXB4 293 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 OTUD6BQ8N6M0 293 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 MKL1Q969V6 931 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 ITPKCQ96DU7 683 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 PRDM4Q9UKN5 801 aa7.05□□□□□ -1.28
CAPN3-211ENST00000562199 SETDB1Q15047 1291 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 CCDC181Q5TID7 509 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 GIMAP6Q6P9H5 292 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 EGFL6Q8IUX8 553 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 CARD14Q9BXL6 1004 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
CAPN3-211ENST00000562199 SH3BP5O60239 455 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 GMPRP36959 345 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 NR5A1Q13285 461 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 NBPF9Q3BBW0 867 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 ARMCX6Q7L4S7 300 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 C8orf37Q96NL8 207 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 NOP58Q9Y2X3 529 aaKnown RBP7.03□□□□□ -1.28
CAPN3-211ENST00000562199 NUB1Q9Y5A7 615 aa7.03□□□□□ -1.28
CAPN3-211ENST00000562199 POLD1P28340 1107 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 NBPF14Q5TI25 921 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 VASH1Q7L8A9 365 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-211ENST00000562199 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-211ENST00000562199 CXorf38Q8TB03 319 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 LRRN4Q8WUT4 740 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 UBXN4Q92575 508 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 ZNF830Q96NB3 372 aaPredicted RBP7.02□□□□□ -1.29
CAPN3-211ENST00000562199 CARD10Q9BWT7 1032 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 MAF1Q9H063 256 aa7.02□□□□□ -1.29
CAPN3-211ENST00000562199 METTL14Q9HCE5 456 aaKnown RBP7.02□□□□□ -1.29
CAPN3-211ENST00000562199 ZRANB2O95218 330 aaKnown RBP eCLIP7.01□□□□□ -1.29
CAPN3-211ENST00000562199 KIF4AO95239 1232 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 PAX3P23760 479 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 FSHRP23945 695 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 HDAC1Q13547 482 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-211ENST00000562199 FBXO31Q5XUX0 539 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-211ENST00000562199 ZNF280DQ6N043 979 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 SH3RF1Q7Z6J0 888 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 IRF7Q92985 503 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 MRRFQ96E11 262 aaKnown RBP7.01□□□□□ -1.29
CAPN3-211ENST00000562199 CDCA7Q9BWT1 371 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-211ENST00000562199 FAM117AQ9C073 453 aa7.01□□□□□ -1.29
CAPN3-211ENST00000562199 STK17AQ9UEE5 414 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms