RNA–Protein interactions for RNA: ENST00000562083.1

CCP110-205, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-205ENST00000562083 C4AP0C0L4 1744 aa18.48■□□□□ 0.55
CCP110-205ENST00000562083 RAPGEF4Q8WZA2 1011 aa18.47■□□□□ 0.55
CCP110-205ENST00000562083 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
CCP110-205ENST00000562083 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
CCP110-205ENST00000562083 PCDH11XQ9BZA7 1347 aa18.46■□□□□ 0.55
CCP110-205ENST00000562083 PCDH11YQ9BZA8 1340 aa18.46■□□□□ 0.55
CCP110-205ENST00000562083 TATP17735 454 aaPredicted RBP18.45■□□□□ 0.54
CCP110-205ENST00000562083 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
CCP110-205ENST00000562083 MKRN1Q9UHC7 482 aaKnown RBP18.45■□□□□ 0.54
CCP110-205ENST00000562083 CGNL1Q0VF96 1302 aa18.45■□□□□ 0.54
CCP110-205ENST00000562083 TMF1P82094 1093 aa18.44■□□□□ 0.54
CCP110-205ENST00000562083 RASSF7Q02833 373 aa18.44■□□□□ 0.54
CCP110-205ENST00000562083 CCDC87Q9NVE4 849 aa18.44■□□□□ 0.54
CCP110-205ENST00000562083 ASAP1Q9ULH1 1129 aa18.44■□□□□ 0.54
CCP110-205ENST00000562083 RRS1Q15050 365 aaKnown RBP18.43■□□□□ 0.54
CCP110-205ENST00000562083 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
CCP110-205ENST00000562083 GYS1P13807 737 aa18.42■□□□□ 0.54
CCP110-205ENST00000562083 ATP6V1AP38606 617 aa18.42■□□□□ 0.54
CCP110-205ENST00000562083 DALRD3Q5D0E6 543 aaKnown RBP18.42■□□□□ 0.54
CCP110-205ENST00000562083 NLGN1Q8N2Q7 840 aa18.42■□□□□ 0.54
CCP110-205ENST00000562083 VEGFAP15692 232 aaPredicted RBP18.41■□□□□ 0.54
CCP110-205ENST00000562083 CHRNA5P30532 468 aa18.41■□□□□ 0.54
CCP110-205ENST00000562083 L3MBTL2Q969R5 705 aa18.41■□□□□ 0.54
CCP110-205ENST00000562083 PRDM10Q9NQV6 1147 aa18.41■□□□□ 0.54
CCP110-205ENST00000562083 POTECB2RU33 542 aa18.4■□□□□ 0.54
CCP110-205ENST00000562083 TRAPPC3LQ5T215 181 aa18.4■□□□□ 0.54
CCP110-205ENST00000562083 ARHGEF1Q92888 912 aaKnown RBP18.4■□□□□ 0.54
CCP110-205ENST00000562083 CCDC88AQ3V6T2 1871 aa18.39■□□□□ 0.54
CCP110-205ENST00000562083 COG3Q96JB2 828 aa18.39■□□□□ 0.53
CCP110-205ENST00000562083 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
CCP110-205ENST00000562083 PARP3Q9Y6F1 533 aa18.39■□□□□ 0.53
CCP110-205ENST00000562083 ROCK2O75116 1388 aaKnown RBP18.39■□□□□ 0.53
CCP110-205ENST00000562083 GLTPD2A6NH11 291 aa18.38■□□□□ 0.53
CCP110-205ENST00000562083 KDM6AO15550 1401 aaPredicted RBP18.38■□□□□ 0.53
CCP110-205ENST00000562083 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
CCP110-205ENST00000562083 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
CCP110-205ENST00000562083 TERF2IPQ9NYB0 399 aa18.37■□□□□ 0.53
CCP110-205ENST00000562083 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
CCP110-205ENST00000562083 TNRC18O15417 2968 aaPredicted RBP18.37■□□□□ 0.53
CCP110-205ENST00000562083 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
CCP110-205ENST00000562083 ABHD8Q96I13 439 aa18.36■□□□□ 0.53
CCP110-205ENST00000562083 ATG3Q9NT62 314 aa18.36■□□□□ 0.53
CCP110-205ENST00000562083 TIAM2Q8IVF5 1701 aa18.35■□□□□ 0.53
CCP110-205ENST00000562083 RTL1A6NKG5 1358 aa18.35■□□□□ 0.53
CCP110-205ENST00000562083 DDR1Q08345 913 aa18.35■□□□□ 0.53
CCP110-205ENST00000562083 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
CCP110-205ENST00000562083 POTEJP0CG39 1038 aa18.34■□□□□ 0.53
CCP110-205ENST00000562083 LBX1P52954 281 aa18.34■□□□□ 0.53
CCP110-205ENST00000562083 CREBZFQ9NS37 354 aa18.34■□□□□ 0.53
CCP110-205ENST00000562083 TMOD3Q9NYL9 352 aa18.34■□□□□ 0.53
CCP110-205ENST00000562083 KDRP35968 1356 aa18.33■□□□□ 0.53
CCP110-205ENST00000562083 COL5A3P25940 1745 aaPredicted RBP18.33■□□□□ 0.52
CCP110-205ENST00000562083 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
CCP110-205ENST00000562083 SRP68Q9UHB9 627 aaKnown RBP18.33■□□□□ 0.52
CCP110-205ENST00000562083 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
CCP110-205ENST00000562083 RFC4P35249 363 aa18.32■□□□□ 0.52
CCP110-205ENST00000562083 SMG6Q86US8 1419 aaKnown RBP18.32■□□□□ 0.52
CCP110-205ENST00000562083 CNTNAP1P78357 1384 aa18.31■□□□□ 0.52
CCP110-205ENST00000562083 LMNB1P20700 586 aa18.31■□□□□ 0.52
CCP110-205ENST00000562083 FKBP8Q14318 412 aa18.31■□□□□ 0.52
CCP110-205ENST00000562083 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
CCP110-205ENST00000562083 INSRP06213 1382 aa18.3■□□□□ 0.52
CCP110-205ENST00000562083 RPS6KA4O75676 772 aa18.29■□□□□ 0.52
CCP110-205ENST00000562083 VEGFBP49765 207 aa18.29■□□□□ 0.52
CCP110-205ENST00000562083 MLLT1Q03111 559 aaPredicted RBP18.29■□□□□ 0.52
CCP110-205ENST00000562083 ADRA2BP18089 450 aa18.28■□□□□ 0.52
CCP110-205ENST00000562083 RC3H1Q5TC82 1133 aaKnown RBP18.28■□□□□ 0.52
CCP110-205ENST00000562083 RBM42Q9BTD8 480 aaKnown RBP18.28■□□□□ 0.52
CCP110-205ENST00000562083 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
CCP110-205ENST00000562083 WBP1LQ9NX94 342 aa18.28■□□□□ 0.52
CCP110-205ENST00000562083 CHADLQ6NUI6 762 aa18.27■□□□□ 0.52
CCP110-205ENST00000562083 AIDAQ96BJ3 306 aa18.27■□□□□ 0.52
CCP110-205ENST00000562083 CNTNAP4Q9C0A0 1308 aa18.26■□□□□ 0.51
CCP110-205ENST00000562083 NFKBIEO00221 500 aa18.26■□□□□ 0.51
CCP110-205ENST00000562083 HSPA8P11142 646 aaKnown RBP18.26■□□□□ 0.51
CCP110-205ENST00000562083 CCDC85CA6NKD9 419 aa18.25■□□□□ 0.51
CCP110-205ENST00000562083 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
CCP110-205ENST00000562083 RGS19P49795 217 aa18.25■□□□□ 0.51
CCP110-205ENST00000562083 ZNF831Q5JPB2 1677 aa18.25■□□□□ 0.51
CCP110-205ENST00000562083 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
CCP110-205ENST00000562083 FYB1O15117 783 aa18.24■□□□□ 0.51
CCP110-205ENST00000562083 PHKG2P15735 406 aa18.24■□□□□ 0.51
CCP110-205ENST00000562083 SIN3AQ96ST3 1273 aa18.24■□□□□ 0.51
CCP110-205ENST00000562083 SPG7Q9UQ90 795 aa18.24■□□□□ 0.51
CCP110-205ENST00000562083 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
CCP110-205ENST00000562083 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
CCP110-205ENST00000562083 PASKQ96RG2 1323 aa18.23■□□□□ 0.51
CCP110-205ENST00000562083 FLT4P35916 1363 aa18.22■□□□□ 0.51
CCP110-205ENST00000562083 TM4SF1P30408 202 aa18.22■□□□□ 0.51
CCP110-205ENST00000562083 DLEC1Q9Y238 1755 aa18.22■□□□□ 0.51
CCP110-205ENST00000562083 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
CCP110-205ENST00000562083 DICER1Q9UPY3 1922 aaKnown RBP18.21■□□□□ 0.51
CCP110-205ENST00000562083 PDE4DIPQ5VU43 2346 aa18.2■□□□□ 0.5
CCP110-205ENST00000562083 EMILIN1Q9Y6C2 1016 aa18.2■□□□□ 0.5
CCP110-205ENST00000562083 DPY19L2Q6NUT2 758 aa18.19■□□□□ 0.5
CCP110-205ENST00000562083 IFNL2Q8IZJ0 200 aa18.19■□□□□ 0.5
CCP110-205ENST00000562083 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
CCP110-205ENST00000562083 DDNO94850 711 aaPredicted RBP18.18■□□□□ 0.5
CCP110-205ENST00000562083 CRKLP46109 303 aaKnown RBP18.18■□□□□ 0.5
CCP110-205ENST00000562083 PUS7Q96PZ0 661 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms