RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 ERVV-2B6SEH9 535 aa18.34■□□□□ 0.53
USB1-205ENST00000561743 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
USB1-205ENST00000561743 LINC00116Q8NCU8 138 aa18.33■□□□□ 0.52
USB1-205ENST00000561743 AK7Q96M32 723 aa18.33■□□□□ 0.52
USB1-205ENST00000561743 CHD4Q14839 1912 aa18.33■□□□□ 0.52
USB1-205ENST00000561743 ITPK1Q13572 414 aa18.32■□□□□ 0.52
USB1-205ENST00000561743 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
USB1-205ENST00000561743 FLAD1Q8NFF5 587 aa18.32■□□□□ 0.52
USB1-205ENST00000561743 UTRNP46939 3433 aa18.32■□□□□ 0.52
USB1-205ENST00000561743 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
USB1-205ENST00000561743 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
USB1-205ENST00000561743 MSL1Q68DK7 614 aa18.31■□□□□ 0.52
USB1-205ENST00000561743 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
USB1-205ENST00000561743 TJP1Q07157 1748 aa18.3■□□□□ 0.52
USB1-205ENST00000561743 YY1P25490 414 aa18.3■□□□□ 0.52
USB1-205ENST00000561743 CNGB1Q14028 1251 aaPredicted RBP18.3■□□□□ 0.52
USB1-205ENST00000561743 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
USB1-205ENST00000561743 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
USB1-205ENST00000561743 DIAPH1O60610 1272 aaKnown RBP18.29■□□□□ 0.52
USB1-205ENST00000561743 PHF14O94880 888 aa18.29■□□□□ 0.52
USB1-205ENST00000561743 HMOX1P09601 288 aa18.29■□□□□ 0.52
USB1-205ENST00000561743 CABP4P57796 275 aa18.29■□□□□ 0.52
USB1-205ENST00000561743 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
USB1-205ENST00000561743 MYH14Q7Z406 1995 aaKnown RBP18.29■□□□□ 0.52
USB1-205ENST00000561743 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
USB1-205ENST00000561743 SSFA2P28290 1259 aa18.28■□□□□ 0.52
USB1-205ENST00000561743 C4AP0C0L4 1744 aa18.28■□□□□ 0.52
USB1-205ENST00000561743 MRC1P22897 1456 aa18.27■□□□□ 0.52
USB1-205ENST00000561743 GNPATO15228 680 aa18.26■□□□□ 0.51
USB1-205ENST00000561743 AKAP4Q5JQC9 854 aa18.26■□□□□ 0.51
USB1-205ENST00000561743 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
USB1-205ENST00000561743 NLGN2Q8NFZ4 835 aa18.26■□□□□ 0.51
USB1-205ENST00000561743 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
USB1-205ENST00000561743 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
USB1-205ENST00000561743 UBR2Q8IWV8 1755 aa18.23■□□□□ 0.51
USB1-205ENST00000561743 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
USB1-205ENST00000561743 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
USB1-205ENST00000561743 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
USB1-205ENST00000561743 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
USB1-205ENST00000561743 PTCD1O75127 700 aaKnown RBP18.21■□□□□ 0.51
USB1-205ENST00000561743 GPR162Q16538 588 aa18.21■□□□□ 0.51
USB1-205ENST00000561743 RC3H1Q5TC82 1133 aaKnown RBP18.21■□□□□ 0.51
USB1-205ENST00000561743 SLC52A2Q9HAB3 445 aa18.21■□□□□ 0.51
USB1-205ENST00000561743 KIF13BQ9NQT8 1826 aa18.21■□□□□ 0.51
USB1-205ENST00000561743 KCPQ6ZWJ8 1503 aa18.2■□□□□ 0.5
USB1-205ENST00000561743 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
USB1-205ENST00000561743 RNMTO43148 476 aaKnown RBP18.2■□□□□ 0.5
USB1-205ENST00000561743 RTCBQ9Y3I0 505 aaKnown RBP18.2■□□□□ 0.5
USB1-205ENST00000561743 CD2APQ9Y5K6 639 aa18.19■□□□□ 0.5
USB1-205ENST00000561743 TRAPPC3LQ5T215 181 aa18.18■□□□□ 0.5
USB1-205ENST00000561743 KIAA1551Q9HCM1 1747 aa18.18■□□□□ 0.5
USB1-205ENST00000561743 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
USB1-205ENST00000561743 ADRA2BP18089 450 aa18.17■□□□□ 0.5
USB1-205ENST00000561743 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
USB1-205ENST00000561743 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
USB1-205ENST00000561743 YBX3P16989 372 aaKnown RBP eCLIP18.16■□□□□ 0.56e-6■□□□□ 10.9
USB1-205ENST00000561743 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
USB1-205ENST00000561743 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
USB1-205ENST00000561743 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
USB1-205ENST00000561743 SLC39A6Q13433 755 aa18.15■□□□□ 0.5
USB1-205ENST00000561743 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.5
USB1-205ENST00000561743 MMP10P09238 476 aa18.14■□□□□ 0.49
USB1-205ENST00000561743 RSPH6AQ9H0K4 717 aa18.14■□□□□ 0.49
USB1-205ENST00000561743 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
USB1-205ENST00000561743 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
USB1-205ENST00000561743 GYS1P13807 737 aa18.12■□□□□ 0.49
USB1-205ENST00000561743 PRKAR2BP31323 418 aa18.12■□□□□ 0.49
USB1-205ENST00000561743 RFC4P35249 363 aa18.12■□□□□ 0.49
USB1-205ENST00000561743 INTS5Q6P9B9 1019 aaKnown RBP18.12■□□□□ 0.49
USB1-205ENST00000561743 DNAJC10Q8IXB1 793 aa18.12■□□□□ 0.49
USB1-205ENST00000561743 NLGN1Q8N2Q7 840 aa18.12■□□□□ 0.49
USB1-205ENST00000561743 ZNF784Q8NCA9 323 aaPredicted RBP18.12■□□□□ 0.49
USB1-205ENST00000561743 IL17REQ8NFR9 667 aa18.11■□□□□ 0.49
USB1-205ENST00000561743 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
USB1-205ENST00000561743 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
USB1-205ENST00000561743 C10orf71Q711Q0 1435 aa18.1■□□□□ 0.49
USB1-205ENST00000561743 CCDC87Q9NVE4 849 aa18.1■□□□□ 0.49
USB1-205ENST00000561743 NUDCQ9Y266 331 aa18.1■□□□□ 0.49
USB1-205ENST00000561743 DLG5Q8TDM6 1919 aa18.1■□□□□ 0.49
USB1-205ENST00000561743 PXDNLA1KZ92 1463 aa18.09■□□□□ 0.49
USB1-205ENST00000561743 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
USB1-205ENST00000561743 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
USB1-205ENST00000561743 GRIN3BO60391 1043 aa18.09■□□□□ 0.49
USB1-205ENST00000561743 U2AF1L5P0DN76 240 aaPredicted RBP18.09■□□□□ 0.49
USB1-205ENST00000561743 CYP19A1P11511 503 aaPredicted RBP18.09■□□□□ 0.49
USB1-205ENST00000561743 U2AF1Q01081 240 aaKnown RBP eCLIP18.09■□□□□ 0.49
USB1-205ENST00000561743 SRP68Q9UHB9 627 aaKnown RBP18.09■□□□□ 0.49
USB1-205ENST00000561743 SOS1Q07889 1333 aaPredicted RBP18.08■□□□□ 0.49
USB1-205ENST00000561743 VSIG10Q8N0Z9 540 aa18.08■□□□□ 0.48
USB1-205ENST00000561743 TEFQ10587 303 aa18.07■□□□□ 0.48
USB1-205ENST00000561743 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
USB1-205ENST00000561743 FCHSD2O94868 740 aa18.06■□□□□ 0.48
USB1-205ENST00000561743 FKBP8Q14318 412 aa18.06■□□□□ 0.48
USB1-205ENST00000561743 TTC5Q8N0Z6 440 aa18.06■□□□□ 0.48
USB1-205ENST00000561743 WWC3Q9ULE0 1092 aa18.06■□□□□ 0.48
USB1-205ENST00000561743 ZBTB1Q9Y2K1 713 aa18.06■□□□□ 0.48
USB1-205ENST00000561743 COL15A1P39059 1388 aa18.05■□□□□ 0.48
USB1-205ENST00000561743 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
USB1-205ENST00000561743 ZNF496Q96IT1 587 aaPredicted RBP18.05■□□□□ 0.48
USB1-205ENST00000561743 PARP3Q9Y6F1 533 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms