RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 SIRT2Q8IXJ6 389 aa12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 SMC5Q8IY18 1101 aa12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 FAM43AQ8N2R8 423 aa12.94□□□□□ -0.34
TUBGCP4-202ENST00000561691 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
TUBGCP4-202ENST00000561691 ABCA3Q99758 1704 aa12.93□□□□□ -0.34
TUBGCP4-202ENST00000561691 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
TUBGCP4-202ENST00000561691 PLEKHO1Q53GL0 409 aaPredicted RBP12.93□□□□□ -0.34
TUBGCP4-202ENST00000561691 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
TUBGCP4-202ENST00000561691 RGS3P49796 1198 aa12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 PTPRCP08575 1304 aa12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 RNMTO43148 476 aaKnown RBP12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 KCNQ3O43525 872 aa12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 EIF4A1P60842 406 aaKnown RBP12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 GLIPR1L2Q4G1C9 344 aa12.92□□□□□ -0.34
TUBGCP4-202ENST00000561691 PLEKHG2Q9H7P9 1386 aa12.91□□□□□ -0.34
TUBGCP4-202ENST00000561691 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
TUBGCP4-202ENST00000561691 MPRIPQ6WCQ1 1025 aa12.91□□□□□ -0.34
TUBGCP4-202ENST00000561691 ATP10DQ9P241 1426 aa12.91□□□□□ -0.34
TUBGCP4-202ENST00000561691 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
TUBGCP4-202ENST00000561691 FAM161AQ3B820 660 aa12.9□□□□□ -0.35
TUBGCP4-202ENST00000561691 C1orf115Q9H7X2 142 aa12.9□□□□□ -0.35
TUBGCP4-202ENST00000561691 VIRMAQ69YN4 1812 aaKnown RBP12.89□□□□□ -0.35
TUBGCP4-202ENST00000561691 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
TUBGCP4-202ENST00000561691 LTBP4Q8N2S1 1624 aa12.88□□□□□ -0.35
TUBGCP4-202ENST00000561691 ZMYND15Q9H091 742 aa12.88□□□□□ -0.35
TUBGCP4-202ENST00000561691 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
TUBGCP4-202ENST00000561691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
TUBGCP4-202ENST00000561691 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 MRC1P22897 1456 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 F6X3S4 739 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 HOXB7P09629 217 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 NUCB1Q02818 461 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 CCDC30Q5VVM6 783 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 PHKG2P15735 406 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 FLIIQ13045 1269 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 SCN11AQ9UI33 1791 aa12.86□□□□□ -0.35
TUBGCP4-202ENST00000561691 CYP27B1O15528 508 aa12.85□□□□□ -0.35
TUBGCP4-202ENST00000561691 C1orf141Q5JVX7 400 aa12.85□□□□□ -0.35
TUBGCP4-202ENST00000561691 MEIS3Q99687 375 aa12.85□□□□□ -0.35
TUBGCP4-202ENST00000561691 CHMP4BQ9H444 224 aaKnown RBP12.85□□□□□ -0.35
TUBGCP4-202ENST00000561691 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 NECTIN2Q92692 538 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 WDR17Q8IZU2 1322 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 PXDNLA1KZ92 1463 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 GLI3P10071 1580 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 TATP17735 454 aaPredicted RBP12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 TEFQ10587 303 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 PODXL2Q9NZ53 605 aa12.84□□□□□ -0.35
TUBGCP4-202ENST00000561691 SEC24BO95487 1268 aa12.83□□□□□ -0.36
TUBGCP4-202ENST00000561691 HDGFL1Q5TGJ6 251 aa12.83□□□□□ -0.36
TUBGCP4-202ENST00000561691 CEP85Q6P2H3 762 aa12.83□□□□□ -0.36
TUBGCP4-202ENST00000561691 STK31Q9BXU1 1019 aa12.83□□□□□ -0.36
TUBGCP4-202ENST00000561691 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
TUBGCP4-202ENST00000561691 AHDC1Q5TGY3 1603 aaPredicted RBP12.83□□□□□ -0.36
TUBGCP4-202ENST00000561691 GIGYF1O75420 1035 aaPredicted RBP12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 PARP4Q9UKK3 1724 aaKnown RBP12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 PRAMEF22A3QJZ6 481 aa12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 NPM2Q86SE8 214 aaKnown RBP12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 VSIG10Q8N0Z9 540 aa12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 SLC52A2Q9HAB3 445 aa12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
TUBGCP4-202ENST00000561691 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 ROBO1Q9Y6N7 1651 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 CHD1LQ86WJ1 897 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 CHPF2Q9P2E5 772 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
TUBGCP4-202ENST00000561691 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
TUBGCP4-202ENST00000561691 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
TUBGCP4-202ENST00000561691 PROSER3Q2NL68 480 aa12.8□□□□□ -0.36
TUBGCP4-202ENST00000561691 RPAP2Q8IXW5 612 aaPredicted RBP12.8□□□□□ -0.36
TUBGCP4-202ENST00000561691 ADCY9O60503 1353 aa12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 C5P01031 1676 aa12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 PDIA6Q15084 440 aa12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
TUBGCP4-202ENST00000561691 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 ANXA1P04083 346 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 EIF2S2P20042 333 aaKnown RBP12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 ZNF790Q6PG37 636 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 SLC39A6Q13433 755 aa12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
TUBGCP4-202ENST00000561691 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms