RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
NEIL1-202ENST00000561643 KIAA1211Q6ZU35 1233 aa13.47□□□□□ -0.25
NEIL1-202ENST00000561643 PRDM4Q9UKN5 801 aa13.47□□□□□ -0.25
NEIL1-202ENST00000561643 GNAI2P04899 355 aa13.47□□□□□ -0.25
NEIL1-202ENST00000561643 PTMSP20962 102 aa13.47□□□□□ -0.25
NEIL1-202ENST00000561643 SSFA2P28290 1259 aa13.47□□□□□ -0.25
NEIL1-202ENST00000561643 NECTIN2Q92692 538 aa13.47□□□□□ -0.25
NEIL1-202ENST00000561643 RIMS1Q86UR5 1692 aaKnown RBP13.47□□□□□ -0.25
NEIL1-202ENST00000561643 FKBP5Q13451 457 aaPredicted RBP13.46□□□□□ -0.25
NEIL1-202ENST00000561643 CEP170BQ9Y4F5 1589 aaPredicted RBP13.46□□□□□ -0.25
NEIL1-202ENST00000561643 GOLGA6L22H0YM25 854 aa13.46□□□□□ -0.25
NEIL1-202ENST00000561643 REC8O95072 547 aa13.46□□□□□ -0.25
NEIL1-202ENST00000561643 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
NEIL1-202ENST00000561643 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
NEIL1-202ENST00000561643 LTV1Q96GA3 475 aaPredicted RBP13.45□□□□□ -0.26
NEIL1-202ENST00000561643 FLIIQ13045 1269 aa13.45□□□□□ -0.26
NEIL1-202ENST00000561643 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
NEIL1-202ENST00000561643 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
NEIL1-202ENST00000561643 DIP2AQ14689 1571 aa13.45□□□□□ -0.26
NEIL1-202ENST00000561643 FMN2Q9NZ56 1722 aa13.45□□□□□ -0.26
NEIL1-202ENST00000561643 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
NEIL1-202ENST00000561643 THEMISQ8N1K5 641 aaPredicted RBP13.44□□□□□ -0.26
NEIL1-202ENST00000561643 ERC2O15083 957 aa13.44□□□□□ -0.26
NEIL1-202ENST00000561643 ST18O60284 1047 aa13.44□□□□□ -0.26
NEIL1-202ENST00000561643 HOXC9P31274 260 aa13.44□□□□□ -0.26
NEIL1-202ENST00000561643 PDE1AP54750 535 aa13.44□□□□□ -0.26
NEIL1-202ENST00000561643 C14orf37Q86TY3 774 aa13.44□□□□□ -0.26
NEIL1-202ENST00000561643 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
NEIL1-202ENST00000561643 GNAI3P08754 354 aa13.43□□□□□ -0.26
NEIL1-202ENST00000561643 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
NEIL1-202ENST00000561643 PRDM10Q9NQV6 1147 aa13.43□□□□□ -0.26
NEIL1-202ENST00000561643 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
NEIL1-202ENST00000561643 SLIT1O75093 1534 aa13.42□□□□□ -0.26
NEIL1-202ENST00000561643 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
NEIL1-202ENST00000561643 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
NEIL1-202ENST00000561643 LRRCC1Q9C099 1032 aa13.42□□□□□ -0.26
NEIL1-202ENST00000561643 OSBPL3Q9H4L5 887 aa13.42□□□□□ -0.26
NEIL1-202ENST00000561643 BAG4O95429 457 aaKnown RBP13.42□□□□□ -0.26
NEIL1-202ENST00000561643 PIK3C2AO00443 1686 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
NEIL1-202ENST00000561643 KCNA6P17658 529 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 NUCB2P80303 420 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 GAS2L3Q86XJ1 694 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 PLCD3Q8N3E9 789 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 FAM13BQ9NYF5 915 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
NEIL1-202ENST00000561643 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
NEIL1-202ENST00000561643 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
NEIL1-202ENST00000561643 DDX49Q9Y6V7 483 aaKnown RBP13.4□□□□□ -0.26
NEIL1-202ENST00000561643 MX1P20591 662 aa13.4□□□□□ -0.26
NEIL1-202ENST00000561643 USHBP1Q8N6Y0 703 aa13.4□□□□□ -0.26
NEIL1-202ENST00000561643 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
NEIL1-202ENST00000561643 ATP8B2P98198 1209 aa13.39□□□□□ -0.27
NEIL1-202ENST00000561643 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
NEIL1-202ENST00000561643 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
NEIL1-202ENST00000561643 CLEC17AQ6ZS10 378 aa13.39□□□□□ -0.27
NEIL1-202ENST00000561643 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
NEIL1-202ENST00000561643 MCTP1Q6DN14 999 aa13.38□□□□□ -0.27
NEIL1-202ENST00000561643 RILPL2Q969X0 211 aa13.38□□□□□ -0.27
NEIL1-202ENST00000561643 CWC22Q9HCG8 908 aaKnown RBP13.38□□□□□ -0.27
NEIL1-202ENST00000561643 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
NEIL1-202ENST00000561643 ZGPATQ8N5A5 531 aaKnown RBP13.38□□□□□ -0.27
NEIL1-202ENST00000561643 SOS1Q07889 1333 aaPredicted RBP13.37□□□□□ -0.27
NEIL1-202ENST00000561643 RBM33Q96EV2 1170 aaKnown RBP13.37□□□□□ -0.27
NEIL1-202ENST00000561643 PKP1Q13835 747 aa13.37□□□□□ -0.27
NEIL1-202ENST00000561643 KLHL40Q2TBA0 621 aa13.37□□□□□ -0.27
NEIL1-202ENST00000561643 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
NEIL1-202ENST00000561643 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
NEIL1-202ENST00000561643 MCCP23508 829 aa13.37□□□□□ -0.27
NEIL1-202ENST00000561643 NEK4P51957 841 aa13.37□□□□□ -0.27
NEIL1-202ENST00000561643 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
NEIL1-202ENST00000561643 ESYT1Q9BSJ8 1104 aa13.37□□□□□ -0.27
NEIL1-202ENST00000561643 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 ZBTB7CA1YPR0 619 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 VGLL3A8MV65 326 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
NEIL1-202ENST00000561643 HSPA2P54652 639 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
NEIL1-202ENST00000561643 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 USP44Q9H0E7 712 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
NEIL1-202ENST00000561643 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
NEIL1-202ENST00000561643 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
NEIL1-202ENST00000561643 CYP2E1P05181 493 aaPredicted RBP13.35□□□□□ -0.27
NEIL1-202ENST00000561643 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
NEIL1-202ENST00000561643 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
NEIL1-202ENST00000561643 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
NEIL1-202ENST00000561643 SRCIN1Q9C0H9 1055 aa13.35□□□□□ -0.27
NEIL1-202ENST00000561643 IL1RAPL2Q9NP60 686 aa13.35□□□□□ -0.27
NEIL1-202ENST00000561643 R3HCC1Q9Y3T6 440 aaKnown RBP13.35□□□□□ -0.27
NEIL1-202ENST00000561643 XRN1Q8IZH2 1706 aaKnown RBP13.34□□□□□ -0.27
NEIL1-202ENST00000561643 GTF2E1P29083 439 aaPredicted RBP13.34□□□□□ -0.27
NEIL1-202ENST00000561643 CHMLP26374 656 aa13.34□□□□□ -0.27
NEIL1-202ENST00000561643 OFD1O75665 1012 aa13.33□□□□□ -0.28
NEIL1-202ENST00000561643 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
NEIL1-202ENST00000561643 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
NEIL1-202ENST00000561643 IP6K1Q92551 441 aa13.33□□□□□ -0.28
NEIL1-202ENST00000561643 TMX3Q96JJ7 454 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms