RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 GNAI1P63096 354 aa30.36■■■□□ 2.45
TMEM249-201ENST00000561638 IFT57Q9NWB7 429 aa30.36■■■□□ 2.45
TMEM249-201ENST00000561638 MRC1P22897 1456 aa30.35■■■□□ 2.45
TMEM249-201ENST00000561638 CDCA7LQ96GN5 454 aa30.35■■■□□ 2.45
TMEM249-201ENST00000561638 CFAP44Q96MT7 982 aa30.35■■■□□ 2.45
TMEM249-201ENST00000561638 BTBD11A6QL63 1104 aa30.34■■■□□ 2.45
TMEM249-201ENST00000561638 MYH16Q9H6N6 1097 aa30.34■■■□□ 2.45
TMEM249-201ENST00000561638 MIS18AQ9NYP9 233 aa30.34■■■□□ 2.45
TMEM249-201ENST00000561638 E9PSI1 815 aa30.33■■■□□ 2.45
TMEM249-201ENST00000561638 TSPYL4Q9UJ04 414 aa30.33■■■□□ 2.45
TMEM249-201ENST00000561638 BCL9O00512 1426 aa30.33■■■□□ 2.45
TMEM249-201ENST00000561638 SPINK5Q9NQ38 1064 aaPredicted RBP30.32■■■□□ 2.44
TMEM249-201ENST00000561638 EP400Q96L91 3159 aa30.31■■■□□ 2.44
TMEM249-201ENST00000561638 KCNQ2O43526 872 aa30.3■■■□□ 2.44
TMEM249-201ENST00000561638 PIGBQ92521 554 aa30.3■■■□□ 2.44
TMEM249-201ENST00000561638 TSR2Q969E8 191 aaKnown RBP30.3■■■□□ 2.44
TMEM249-201ENST00000561638 CHL1O00533 1208 aa30.29■■■□□ 2.44
TMEM249-201ENST00000561638 SLFN5Q08AF3 891 aa30.29■■■□□ 2.44
TMEM249-201ENST00000561638 MBIPQ9NS73 344 aa30.29■■■□□ 2.44
TMEM249-201ENST00000561638 ITGB4P16144 1822 aa30.29■■■□□ 2.44
TMEM249-201ENST00000561638 SIPA1L3O60292 1781 aaPredicted RBP30.28■■■□□ 2.44
TMEM249-201ENST00000561638 ZNF853P0CG23 659 aa30.28■■■□□ 2.44
TMEM249-201ENST00000561638 TTC5Q8N0Z6 440 aa30.28■■■□□ 2.44
TMEM249-201ENST00000561638 BABAM1Q9NWV8 329 aa30.28■■■□□ 2.44
TMEM249-201ENST00000561638 FANCIQ9NVI1 1328 aa30.27■■■□□ 2.44
TMEM249-201ENST00000561638 SLC39A6Q13433 755 aa30.26■■■□□ 2.43
TMEM249-201ENST00000561638 NHSQ6T4R5 1651 aa30.24■■■□□ 2.43
TMEM249-201ENST00000561638 ZNF790Q6PG37 636 aa30.24■■■□□ 2.43
TMEM249-201ENST00000561638 TRIM37O94972 964 aa30.23■■■□□ 2.43
TMEM249-201ENST00000561638 SBF2Q86WG5 1849 aa30.22■■■□□ 2.43
TMEM249-201ENST00000561638 BCL11BQ9C0K0 894 aaPredicted RBP30.22■■■□□ 2.43
TMEM249-201ENST00000561638 ASAP1Q9ULH1 1129 aa30.22■■■□□ 2.43
TMEM249-201ENST00000561638 PTF1AQ7RTS3 328 aa30.21■■■□□ 2.43
TMEM249-201ENST00000561638 KCNQ3O43525 872 aa30.2■■■□□ 2.43
TMEM249-201ENST00000561638 DUSP27Q5VZP5 1158 aa30.2■■■□□ 2.43
TMEM249-201ENST00000561638 ATG3Q9NT62 314 aa30.19■■■□□ 2.42
TMEM249-201ENST00000561638 KDM3BQ7LBC6 1761 aa30.19■■■□□ 2.42
TMEM249-201ENST00000561638 TRMT2AQ8IZ69 625 aaKnown RBP30.18■■■□□ 2.42
TMEM249-201ENST00000561638 PTCD1O75127 700 aaKnown RBP30.18■■■□□ 2.42
TMEM249-201ENST00000561638 EXOSC9Q06265 439 aaKnown RBP30.16■■■□□ 2.42
TMEM249-201ENST00000561638 SMARCC1Q92922 1105 aaPredicted RBP30.16■■■□□ 2.42
TMEM249-201ENST00000561638 BTAF1O14981 1849 aa30.16■■■□□ 2.42
TMEM249-201ENST00000561638 EIF4A1P60842 406 aaKnown RBP30.15■■■□□ 2.42
TMEM249-201ENST00000561638 FMNL2Q96PY5 1086 aa30.15■■■□□ 2.42
TMEM249-201ENST00000561638 ZNF496Q96IT1 587 aaPredicted RBP30.15■■■□□ 2.42
TMEM249-201ENST00000561638 PAPPAQ13219 1627 aa30.15■■■□□ 2.42
TMEM249-201ENST00000561638 PALLDQ8WX93 1383 aa30.15■■■□□ 2.42
TMEM249-201ENST00000561638 RBM42Q9BTD8 480 aaKnown RBP30.14■■■□□ 2.42
TMEM249-201ENST00000561638 ELL2O00472 640 aaPredicted RBP30.13■■■□□ 2.41
TMEM249-201ENST00000561638 KRT24Q2M2I5 525 aa30.13■■■□□ 2.41
TMEM249-201ENST00000561638 C8orf58Q8NAV2 365 aa30.11■■■□□ 2.41
TMEM249-201ENST00000561638 KCPQ6ZWJ8 1503 aa30.1■■■□□ 2.41
TMEM249-201ENST00000561638 TWISTNBQ3B726 338 aaPredicted RBP30.1■■■□□ 2.41
TMEM249-201ENST00000561638 UBR2Q8IWV8 1755 aa30.09■■■□□ 2.41
TMEM249-201ENST00000561638 APBA3O96018 575 aa30.08■■■□□ 2.41
TMEM249-201ENST00000561638 TSPYL6Q8N831 410 aa30.08■■■□□ 2.41
TMEM249-201ENST00000561638 HEG1Q9ULI3 1381 aa30.08■■■□□ 2.41
TMEM249-201ENST00000561638 SNRPA1P09661 255 aaKnown RBP30.08■■■□□ 2.41
TMEM249-201ENST00000561638 SF3B2Q13435 895 aaKnown RBP30.08■■■□□ 2.41
TMEM249-201ENST00000561638 LOC102724428A0A0B4J2F2 783 aa30.06■■■□□ 2.4
TMEM249-201ENST00000561638 GIGYF1O75420 1035 aaPredicted RBP30.06■■■□□ 2.4
TMEM249-201ENST00000561638 SIK1P57059 783 aa30.06■■■□□ 2.4
TMEM249-201ENST00000561638 CENPBP07199 599 aaPredicted RBP30.05■■■□□ 2.4
TMEM249-201ENST00000561638 ATP6V1AP38606 617 aa30.04■■■□□ 2.4
TMEM249-201ENST00000561638 VSIG10Q8N0Z9 540 aa30.04■■■□□ 2.4
TMEM249-201ENST00000561638 SOS1Q07889 1333 aaPredicted RBP30.03■■■□□ 2.4
TMEM249-201ENST00000561638 PRAMEF22A3QJZ6 481 aa30.03■■■□□ 2.4
TMEM249-201ENST00000561638 HOXB7P09629 217 aa30.03■■■□□ 2.4
TMEM249-201ENST00000561638 CT47B1P0C2W7 299 aaPredicted RBP30.03■■■□□ 2.4
TMEM249-201ENST00000561638 EIF2S2P20042 333 aaKnown RBP30.02■■■□□ 2.4
TMEM249-201ENST00000561638 TNS1Q9HBL0 1735 aaKnown RBP30.01■■■□□ 2.4
TMEM249-201ENST00000561638 CCNL1Q9UK58 526 aaPredicted RBP30.01■■■□□ 2.39
TMEM249-201ENST00000561638 VAMP4O75379 141 aa30■■■□□ 2.39
TMEM249-201ENST00000561638 HDGFL1Q5TGJ6 251 aa30■■■□□ 2.39
TMEM249-201ENST00000561638 NECTIN2Q92692 538 aa30■■■□□ 2.39
TMEM249-201ENST00000561638 SLC4A9Q96Q91 983 aa30■■■□□ 2.39
TMEM249-201ENST00000561638 TEX13AQ9BXU3 409 aaPredicted RBP30■■■□□ 2.39
TMEM249-201ENST00000561638 DNAJC10Q8IXB1 793 aa29.99■■■□□ 2.39
TMEM249-201ENST00000561638 CHMP4AQ9BY43 222 aa29.99■■■□□ 2.39
TMEM249-201ENST00000561638 PLSCR1O15162 318 aa29.98■■■□□ 2.39
TMEM249-201ENST00000561638 STARD3NLO95772 234 aa29.98■■■□□ 2.39
TMEM249-201ENST00000561638 KCNQ4P56696 695 aa29.98■■■□□ 2.39
TMEM249-201ENST00000561638 USP16Q9Y5T5 823 aa29.98■■■□□ 2.39
TMEM249-201ENST00000561638 C5P01031 1676 aa29.97■■■□□ 2.39
TMEM249-201ENST00000561638 CCDC30Q5VVM6 783 aa29.96■■■□□ 2.39
TMEM249-201ENST00000561638 CCDC125Q86Z20 511 aa29.96■■■□□ 2.39
TMEM249-201ENST00000561638 ZNF428Q96B54 188 aa29.96■■■□□ 2.39
TMEM249-201ENST00000561638 LY75O60449 1722 aa29.96■■■□□ 2.39
TMEM249-201ENST00000561638 BAG6P46379 1132 aa29.95■■■□□ 2.39
TMEM249-201ENST00000561638 TCERG1O14776 1098 aaKnown RBP29.95■■■□□ 2.38
TMEM249-201ENST00000561638 ITPK1Q13572 414 aa29.95■■■□□ 2.38
TMEM249-201ENST00000561638 SLC27A3Q5K4L6 730 aa29.95■■■□□ 2.38
TMEM249-201ENST00000561638 STK31Q9BXU1 1019 aa29.95■■■□□ 2.38
TMEM249-201ENST00000561638 RCAN3Q9UKA8 241 aa29.95■■■□□ 2.38
TMEM249-201ENST00000561638 TXNRD1Q16881 649 aa29.94■■■□□ 2.38
TMEM249-201ENST00000561638 ILDR2Q71H61 639 aa29.94■■■□□ 2.38
TMEM249-201ENST00000561638 LAMB4A4D0S4 1761 aa29.93■■■□□ 2.38
TMEM249-201ENST00000561638 BCL2L13Q9BXK5 485 aa29.92■■■□□ 2.38
TMEM249-201ENST00000561638 EN1Q05925 392 aaPredicted RBP29.92■■■□□ 2.38
TMEM249-201ENST00000561638 TJP1Q07157 1748 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms