RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 MARVELD3Q96A59 401 aa12.91□□□□□ -0.34
LINC00566-201ENST00000561557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC00566-201ENST00000561557 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
LINC00566-201ENST00000561557 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
LINC00566-201ENST00000561557 SPG7Q9UQ90 795 aa12.89□□□□□ -0.35
LINC00566-201ENST00000561557 FAM182BQ5T319 152 aa12.88□□□□□ -0.35
LINC00566-201ENST00000561557 NUDCQ9Y266 331 aa12.88□□□□□ -0.35
LINC00566-201ENST00000561557 MEGF6O75095 1541 aa12.88□□□□□ -0.35
LINC00566-201ENST00000561557 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
LINC00566-201ENST00000561557 PROM2Q8N271 834 aa12.87□□□□□ -0.35
LINC00566-201ENST00000561557 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
LINC00566-201ENST00000561557 PCDH11XQ9BZA7 1347 aa12.87□□□□□ -0.35
LINC00566-201ENST00000561557 PCDH11YQ9BZA8 1340 aa12.87□□□□□ -0.35
LINC00566-201ENST00000561557 KDRP35968 1356 aa12.86□□□□□ -0.35
LINC00566-201ENST00000561557 BAG6P46379 1132 aa12.86□□□□□ -0.35
LINC00566-201ENST00000561557 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
LINC00566-201ENST00000561557 SULT6B1Q6IMI4 303 aa12.86□□□□□ -0.35
LINC00566-201ENST00000561557 BCL11BQ9C0K0 894 aaPredicted RBP12.86□□□□□ -0.35
LINC00566-201ENST00000561557 SNPHO15079 494 aa12.85□□□□□ -0.35
LINC00566-201ENST00000561557 TRIM37O94972 964 aa12.85□□□□□ -0.35
LINC00566-201ENST00000561557 PLCG2P16885 1265 aa12.85□□□□□ -0.35
LINC00566-201ENST00000561557 MYBBP1AQ9BQG0 1328 aaKnown RBP12.85□□□□□ -0.35
LINC00566-201ENST00000561557 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
LINC00566-201ENST00000561557 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
LINC00566-201ENST00000561557 NKX1-1Q15270 411 aaPredicted RBP12.84□□□□□ -0.35
LINC00566-201ENST00000561557 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
LINC00566-201ENST00000561557 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
LINC00566-201ENST00000561557 PRKRIP1Q9H875 184 aaPredicted RBP12.84□□□□□ -0.35
LINC00566-201ENST00000561557 PKD1L3Q7Z443 1732 aa12.82□□□□□ -0.36
LINC00566-201ENST00000561557 U2SURPO15042 1029 aaKnown RBP12.82□□□□□ -0.36
LINC00566-201ENST00000561557 PLSCR1O15162 318 aa12.82□□□□□ -0.36
LINC00566-201ENST00000561557 CYP27B1O15528 508 aa12.82□□□□□ -0.36
LINC00566-201ENST00000561557 APBA3O96018 575 aa12.82□□□□□ -0.36
LINC00566-201ENST00000561557 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
LINC00566-201ENST00000561557 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
LINC00566-201ENST00000561557 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
LINC00566-201ENST00000561557 FCHSD2O94868 740 aa12.81□□□□□ -0.36
LINC00566-201ENST00000561557 HMOX1P09601 288 aa12.81□□□□□ -0.36
LINC00566-201ENST00000561557 PHKG2P15735 406 aa12.81□□□□□ -0.36
LINC00566-201ENST00000561557 SHANK3Q9BYB0 1731 aa12.81□□□□□ -0.36
LINC00566-201ENST00000561557 KAT6BQ8WYB5 2073 aa12.81□□□□□ -0.36
LINC00566-201ENST00000561557 U2AF1L5P0DN76 240 aaPredicted RBP12.8□□□□□ -0.36
LINC00566-201ENST00000561557 U2AF1Q01081 240 aaKnown RBP eCLIP12.8□□□□□ -0.36
LINC00566-201ENST00000561557 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
LINC00566-201ENST00000561557 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
LINC00566-201ENST00000561557 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
LINC00566-201ENST00000561557 ANP32CO43423 234 aa12.79□□□□□ -0.36
LINC00566-201ENST00000561557 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
LINC00566-201ENST00000561557 ZNF530Q6P9A1 599 aaPredicted RBP12.79□□□□□ -0.36
LINC00566-201ENST00000561557 DEFB132Q7Z7B7 95 aa12.79□□□□□ -0.36
LINC00566-201ENST00000561557 ACSBG1Q96GR2 724 aa12.79□□□□□ -0.36
LINC00566-201ENST00000561557 CAMKK2Q96RR4 588 aa12.79□□□□□ -0.36
LINC00566-201ENST00000561557 TNS1Q9HBL0 1735 aaKnown RBP12.79□□□□□ -0.36
LINC00566-201ENST00000561557 KCNQ2O43526 872 aa12.78□□□□□ -0.36
LINC00566-201ENST00000561557 HMGB2P26583 209 aaKnown RBP12.78□□□□□ -0.36
LINC00566-201ENST00000561557 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
LINC00566-201ENST00000561557 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
LINC00566-201ENST00000561557 AKAP4Q5JQC9 854 aa12.78□□□□□ -0.36
LINC00566-201ENST00000561557 DCAF5Q96JK2 942 aa12.78□□□□□ -0.36
LINC00566-201ENST00000561557 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
LINC00566-201ENST00000561557 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
LINC00566-201ENST00000561557 NHSQ6T4R5 1651 aa12.77□□□□□ -0.36
LINC00566-201ENST00000561557 ERVV-2B6SEH9 535 aa12.77□□□□□ -0.37
LINC00566-201ENST00000561557 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
LINC00566-201ENST00000561557 NEFMP07197 916 aa12.76□□□□□ -0.37
LINC00566-201ENST00000561557 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
LINC00566-201ENST00000561557 RGPD3A6NKT7 1758 aaPredicted RBP12.75□□□□□ -0.37
LINC00566-201ENST00000561557 PRKAR2BP31323 418 aa12.75□□□□□ -0.37
LINC00566-201ENST00000561557 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
LINC00566-201ENST00000561557 MTHFSDQ2M296 383 aaKnown RBP12.75□□□□□ -0.37
LINC00566-201ENST00000561557 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
LINC00566-201ENST00000561557 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
LINC00566-201ENST00000561557 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
LINC00566-201ENST00000561557 SMARCC1Q92922 1105 aaPredicted RBP12.74□□□□□ -0.37
LINC00566-201ENST00000561557 KRTAP3-3Q9BYR6 98 aa12.74□□□□□ -0.37
LINC00566-201ENST00000561557 KRTAP3-2Q9BYR7 98 aa12.74□□□□□ -0.37
LINC00566-201ENST00000561557 EMP3P54852 163 aa12.73□□□□□ -0.37
LINC00566-201ENST00000561557 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
LINC00566-201ENST00000561557 TMEM106CQ9BVX2 250 aa12.73□□□□□ -0.37
LINC00566-201ENST00000561557 TMOD3Q9NYL9 352 aa12.73□□□□□ -0.37
LINC00566-201ENST00000561557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.73□□□□□ -0.37
LINC00566-201ENST00000561557 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
LINC00566-201ENST00000561557 BTAF1O14981 1849 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 GNAT3A8MTJ3 354 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
LINC00566-201ENST00000561557 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
LINC00566-201ENST00000561557 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 SLC27A3Q5K4L6 730 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 NBPF14Q5TI25 921 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 PIGBQ92521 554 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 PHACTR3Q96KR7 559 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
LINC00566-201ENST00000561557 RNMTO43148 476 aaKnown RBP12.71□□□□□ -0.37
LINC00566-201ENST00000561557 CABP4P57796 275 aa12.71□□□□□ -0.37
LINC00566-201ENST00000561557 EP400Q96L91 3159 aa12.71□□□□□ -0.37
LINC00566-201ENST00000561557 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.38
LINC00566-201ENST00000561557 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
LINC00566-201ENST00000561557 ITGB4P16144 1822 aa12.7□□□□□ -0.38
LINC00566-201ENST00000561557 IFNL1Q8IU54 200 aa12.7□□□□□ -0.38
LINC00566-201ENST00000561557 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms