RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 TUBGCP6Q96RT7 1819 aa27.78■■■□□ 2.04
TPM1-232ENST00000561425 FLAD1Q8NFF5 587 aa27.77■■■□□ 2.04
TPM1-232ENST00000561425 LGR6Q9HBX8 967 aa27.77■■■□□ 2.04
TPM1-232ENST00000561425 COL24A1Q17RW2 1714 aa27.77■■■□□ 2.04
TPM1-232ENST00000561425 ATP6V1AP38606 617 aa27.76■■■□□ 2.03
TPM1-232ENST00000561425 C4BP0C0L5 1744 aa27.75■■■□□ 2.03
TPM1-232ENST00000561425 RNMTO43148 476 aaKnown RBP27.75■■■□□ 2.03
TPM1-232ENST00000561425 AMIGO3Q86WK7 504 aa27.75■■■□□ 2.03
TPM1-232ENST00000561425 ZNF831Q5JPB2 1677 aa27.75■■■□□ 2.03
TPM1-232ENST00000561425 RSPH6AQ9H0K4 717 aa27.74■■■□□ 2.03
TPM1-232ENST00000561425 SLC52A2Q9HAB3 445 aa27.74■■■□□ 2.03
TPM1-232ENST00000561425 NUDCQ9Y266 331 aa27.74■■■□□ 2.03
TPM1-232ENST00000561425 ADAMTS7Q9UKP4 1686 aa27.73■■■□□ 2.03
TPM1-232ENST00000561425 MRC1P22897 1456 aa27.72■■■□□ 2.03
TPM1-232ENST00000561425 ARXQ96QS3 562 aa27.72■■■□□ 2.03
TPM1-232ENST00000561425 SCN11AQ9UI33 1791 aa27.72■■■□□ 2.03
TPM1-232ENST00000561425 AK7Q96M32 723 aa27.71■■■□□ 2.03
TPM1-232ENST00000561425 FCHSD2O94868 740 aa27.7■■■□□ 2.02
TPM1-232ENST00000561425 GAS2L2Q8NHY3 880 aa27.7■■■□□ 2.02
TPM1-232ENST00000561425 PHACTR3Q96KR7 559 aa27.7■■■□□ 2.02
TPM1-232ENST00000561425 MAP3K5Q99683 1374 aa27.7■■■□□ 2.02
TPM1-232ENST00000561425 SSFA2P28290 1259 aa27.69■■■□□ 2.02
TPM1-232ENST00000561425 RC3H1Q5TC82 1133 aaKnown RBP27.69■■■□□ 2.02
TPM1-232ENST00000561425 SYT17Q9BSW7 474 aa27.69■■■□□ 2.02
TPM1-232ENST00000561425 FHDC1Q9C0D6 1143 aaPredicted RBP27.69■■■□□ 2.02
TPM1-232ENST00000561425 PRKAR2BP31323 418 aa27.68■■■□□ 2.02
TPM1-232ENST00000561425 DDX10Q13206 875 aaKnown RBP27.68■■■□□ 2.02
TPM1-232ENST00000561425 RBM42Q9BTD8 480 aaKnown RBP27.68■■■□□ 2.02
TPM1-232ENST00000561425 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.67■■■□□ 2.02
TPM1-232ENST00000561425 IL17REQ8NFR9 667 aa27.67■■■□□ 2.02
TPM1-232ENST00000561425 U2AF1L5P0DN76 240 aaPredicted RBP27.66■■■□□ 2.02
TPM1-232ENST00000561425 POLD1P28340 1107 aa27.66■■■□□ 2.02
TPM1-232ENST00000561425 U2AF1Q01081 240 aaKnown RBP eCLIP27.66■■■□□ 2.02
TPM1-232ENST00000561425 UBR3Q6ZT12 1888 aa27.66■■■□□ 2.02
TPM1-232ENST00000561425 CNTNAP4Q9C0A0 1308 aa27.66■■■□□ 2.02
TPM1-232ENST00000561425 GNAT3A8MTJ3 354 aa27.65■■■□□ 2.02
TPM1-232ENST00000561425 ZEB1P37275 1124 aaPredicted RBP27.65■■■□□ 2.02
TPM1-232ENST00000561425 RALBP1Q15311 655 aa27.65■■■□□ 2.02
TPM1-232ENST00000561425 MSH5O43196 834 aa27.64■■■□□ 2.02
TPM1-232ENST00000561425 PTCD1O75127 700 aaKnown RBP27.64■■■□□ 2.02
TPM1-232ENST00000561425 SMIM5Q71RC9 77 aa27.64■■■□□ 2.02
TPM1-232ENST00000561425 CEMIPQ8WUJ3 1361 aa27.62■■■□□ 2.01
TPM1-232ENST00000561425 GNPATO15228 680 aa27.62■■■□□ 2.01
TPM1-232ENST00000561425 CICQ96RK0 1608 aaPredicted RBP27.62■■■□□ 2.01
TPM1-232ENST00000561425 RPS6KA4O75676 772 aa27.61■■■□□ 2.01
TPM1-232ENST00000561425 COL5A3P25940 1745 aaPredicted RBP27.59■■■□□ 2.01
TPM1-232ENST00000561425 PHF14O94880 888 aa27.59■■■□□ 2.01
TPM1-232ENST00000561425 SLC39A6Q13433 755 aa27.59■■■□□ 2.01
TPM1-232ENST00000561425 RTCBQ9Y3I0 505 aaKnown RBP27.59■■■□□ 2.01
TPM1-232ENST00000561425 ADRA2BP18089 450 aa27.58■■■□□ 2.01
TPM1-232ENST00000561425 TRAPPC3LQ5T215 181 aa27.57■■■□□ 2
TPM1-232ENST00000561425 MSL1Q68DK7 614 aa27.57■■■□□ 2
TPM1-232ENST00000561425 VSIG10Q8N0Z9 540 aa27.57■■■□□ 2
TPM1-232ENST00000561425 KCPQ6ZWJ8 1503 aa27.57■■■□□ 2
TPM1-232ENST00000561425 PLEKHF1Q96S99 279 aa27.56■■■□□ 2
TPM1-232ENST00000561425 HTATSF1O43719 755 aaKnown RBP27.55■■■□□ 2
TPM1-232ENST00000561425 CRKLP46109 303 aaKnown RBP27.55■■■□□ 2
TPM1-232ENST00000561425 INTS5Q6P9B9 1019 aaKnown RBP27.55■■■□□ 2
TPM1-232ENST00000561425 ARHGEF1Q92888 912 aaKnown RBP27.55■■■□□ 2
TPM1-232ENST00000561425 TJP1Q07157 1748 aa27.54■■■□□ 2
TPM1-232ENST00000561425 VIRMAQ69YN4 1812 aaKnown RBP27.54■■■□□ 2
TPM1-232ENST00000561425 DNAJC10Q8IXB1 793 aa27.54■■■□□ 2
TPM1-232ENST00000561425 MYH14Q7Z406 1995 aaKnown RBP27.53■■■□□ 2
TPM1-232ENST00000561425 TEFQ10587 303 aa27.53■■■□□ 2
TPM1-232ENST00000561425 CYP19A1P11511 503 aaPredicted RBP27.52■■■□□ 2
TPM1-232ENST00000561425 ZNF790Q6PG37 636 aa27.52■■■□□ 2
TPM1-232ENST00000561425 MYBBP1AQ9BQG0 1328 aaKnown RBP27.51■■□□□ 1.99
TPM1-232ENST00000561425 SIPA1L3O60292 1781 aaPredicted RBP27.5■■□□□ 1.99
TPM1-232ENST00000561425 DCAF8L1A6NGE4 600 aa27.49■■□□□ 1.99
TPM1-232ENST00000561425 CD2APQ9Y5K6 639 aa27.49■■□□□ 1.99
TPM1-232ENST00000561425 UBR2Q8IWV8 1755 aa27.49■■□□□ 1.99
TPM1-232ENST00000561425 NLGN1Q8N2Q7 840 aa27.48■■□□□ 1.99
TPM1-232ENST00000561425 ZNF496Q96IT1 587 aaPredicted RBP27.48■■□□□ 1.99
TPM1-232ENST00000561425 CCDC87Q9NVE4 849 aa27.48■■□□□ 1.99
TPM1-232ENST00000561425 GYS1P13807 737 aa27.47■■□□□ 1.99
TPM1-232ENST00000561425 TTC5Q8N0Z6 440 aa27.47■■□□□ 1.99
TPM1-232ENST00000561425 NLGN2Q8NFZ4 835 aa27.47■■□□□ 1.99
TPM1-232ENST00000561425 RFC4P35249 363 aa27.46■■□□□ 1.99
TPM1-232ENST00000561425 RTF1Q92541 710 aaKnown RBP27.46■■□□□ 1.99
TPM1-232ENST00000561425 PNNQ9H307 717 aaKnown RBP27.46■■□□□ 1.99
TPM1-232ENST00000561425 HEG1Q9ULI3 1381 aa27.46■■□□□ 1.99
TPM1-232ENST00000561425 SOS1Q07889 1333 aaPredicted RBP27.45■■□□□ 1.99
TPM1-232ENST00000561425 MCM10Q7L590 875 aa27.45■■□□□ 1.98
TPM1-232ENST00000561425 PRKRIP1Q9H875 184 aaPredicted RBP27.45■■□□□ 1.98
TPM1-232ENST00000561425 BTBD11A6QL63 1104 aa27.44■■□□□ 1.98
TPM1-232ENST00000561425 KCNQ3O43525 872 aa27.43■■□□□ 1.98
TPM1-232ENST00000561425 DCTN1Q14203 1278 aa27.43■■□□□ 1.98
TPM1-232ENST00000561425 TEX13AQ9BXU3 409 aaPredicted RBP27.43■■□□□ 1.98
TPM1-232ENST00000561425 NFE2L2Q16236 605 aa27.42■■□□□ 1.98
TPM1-232ENST00000561425 KLHL34Q8N239 644 aa27.42■■□□□ 1.98
TPM1-232ENST00000561425 FMNL2Q96PY5 1086 aa27.42■■□□□ 1.98
TPM1-232ENST00000561425 USP42Q9H9J4 1324 aaKnown RBP27.41■■□□□ 1.98
TPM1-232ENST00000561425 NEFMP07197 916 aa27.41■■□□□ 1.98
TPM1-232ENST00000561425 MMP10P09238 476 aa27.41■■□□□ 1.98
TPM1-232ENST00000561425 ZBTB1Q9Y2K1 713 aa27.41■■□□□ 1.98
TPM1-232ENST00000561425 STARD3NLO95772 234 aa27.4■■□□□ 1.98
TPM1-232ENST00000561425 TAF7Q15545 349 aaPredicted RBP27.39■■□□□ 1.98
TPM1-232ENST00000561425 C4AP0C0L4 1744 aa27.38■■□□□ 1.97
TPM1-232ENST00000561425 EIF5P55010 431 aaKnown RBP27.38■■□□□ 1.97
TPM1-232ENST00000561425 SRP68Q9UHB9 627 aaKnown RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms