RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
IRF9-213ENST00000561342 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
IRF9-213ENST00000561342 FYB1O15117 783 aa16.46■□□□□ 0.23
IRF9-213ENST00000561342 VEGFAP15692 232 aaPredicted RBP16.46■□□□□ 0.23
IRF9-213ENST00000561342 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
IRF9-213ENST00000561342 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
IRF9-213ENST00000561342 LINC00116Q8NCU8 138 aa16.45■□□□□ 0.22
IRF9-213ENST00000561342 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
IRF9-213ENST00000561342 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
IRF9-213ENST00000561342 LOC102724428A0A0B4J2F2 783 aa16.44■□□□□ 0.22
IRF9-213ENST00000561342 SIK1P57059 783 aa16.44■□□□□ 0.22
IRF9-213ENST00000561342 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
IRF9-213ENST00000561342 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
IRF9-213ENST00000561342 FOXN1O15353 648 aa16.43■□□□□ 0.22
IRF9-213ENST00000561342 AIDAQ96BJ3 306 aa16.43■□□□□ 0.22
IRF9-213ENST00000561342 PARP3Q9Y6F1 533 aa16.43■□□□□ 0.22
IRF9-213ENST00000561342 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
IRF9-213ENST00000561342 KCNA3P22001 575 aa16.42■□□□□ 0.22
IRF9-213ENST00000561342 CTCFP49711 727 aaPredicted RBP16.42■□□□□ 0.22
IRF9-213ENST00000561342 TRAPPC3LQ5T215 181 aa16.42■□□□□ 0.22
IRF9-213ENST00000561342 NBPF6Q5VWK0 638 aa16.42■□□□□ 0.22
IRF9-213ENST00000561342 NBPF4Q96M43 638 aa16.42■□□□□ 0.22
IRF9-213ENST00000561342 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
IRF9-213ENST00000561342 INSRP06213 1382 aa16.41■□□□□ 0.22
IRF9-213ENST00000561342 PIGBQ92521 554 aa16.41■□□□□ 0.22
IRF9-213ENST00000561342 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
IRF9-213ENST00000561342 MKRN1Q9UHC7 482 aaKnown RBP16.41■□□□□ 0.22
IRF9-213ENST00000561342 RTCBQ9Y3I0 505 aaKnown RBP16.41■□□□□ 0.22
IRF9-213ENST00000561342 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
IRF9-213ENST00000561342 FLT4P35916 1363 aa16.4■□□□□ 0.22
IRF9-213ENST00000561342 GLTPD2A6NH11 291 aa16.4■□□□□ 0.22
IRF9-213ENST00000561342 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
IRF9-213ENST00000561342 MLLT1Q03111 559 aaPredicted RBP16.4■□□□□ 0.22
IRF9-213ENST00000561342 RRS1Q15050 365 aaKnown RBP16.4■□□□□ 0.22
IRF9-213ENST00000561342 USHBP1Q8N6Y0 703 aa16.4■□□□□ 0.22
IRF9-213ENST00000561342 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
IRF9-213ENST00000561342 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
IRF9-213ENST00000561342 FBLN1P23142 703 aa16.39■□□□□ 0.21
IRF9-213ENST00000561342 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.21
IRF9-213ENST00000561342 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
IRF9-213ENST00000561342 ITPK1Q13572 414 aa16.38■□□□□ 0.21
IRF9-213ENST00000561342 ABHD8Q96I13 439 aa16.38■□□□□ 0.21
IRF9-213ENST00000561342 CYP27B1O15528 508 aa16.37■□□□□ 0.21
IRF9-213ENST00000561342 RFC4P35249 363 aa16.37■□□□□ 0.21
IRF9-213ENST00000561342 KIF13BQ9NQT8 1826 aa16.37■□□□□ 0.21
IRF9-213ENST00000561342 KIAA1551Q9HCM1 1747 aa16.36■□□□□ 0.21
IRF9-213ENST00000561342 ADRA2BP18089 450 aa16.36■□□□□ 0.21
IRF9-213ENST00000561342 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
IRF9-213ENST00000561342 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
IRF9-213ENST00000561342 GYS1P13807 737 aa16.35■□□□□ 0.21
IRF9-213ENST00000561342 LMNB1P20700 586 aa16.35■□□□□ 0.21
IRF9-213ENST00000561342 HSP90AB2PQ58FF8 381 aa16.35■□□□□ 0.21
IRF9-213ENST00000561342 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
IRF9-213ENST00000561342 LBX1P52954 281 aa16.34■□□□□ 0.21
IRF9-213ENST00000561342 DPY19L2Q6NUT2 758 aa16.34■□□□□ 0.21
IRF9-213ENST00000561342 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
IRF9-213ENST00000561342 RASSF7Q02833 373 aa16.33■□□□□ 0.2
IRF9-213ENST00000561342 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
IRF9-213ENST00000561342 CHRNA5P30532 468 aa16.32■□□□□ 0.2
IRF9-213ENST00000561342 CNTNAP1P78357 1384 aa16.32■□□□□ 0.2
IRF9-213ENST00000561342 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
IRF9-213ENST00000561342 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
IRF9-213ENST00000561342 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
IRF9-213ENST00000561342 CHADLQ6NUI6 762 aa16.31■□□□□ 0.2
IRF9-213ENST00000561342 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
IRF9-213ENST00000561342 CCDC85CA6NKD9 419 aa16.3■□□□□ 0.2
IRF9-213ENST00000561342 RGS19P49795 217 aa16.3■□□□□ 0.2
IRF9-213ENST00000561342 RC3H1Q5TC82 1133 aaKnown RBP16.3■□□□□ 0.2
IRF9-213ENST00000561342 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
IRF9-213ENST00000561342 C4AP0C0L4 1744 aa16.3■□□□□ 0.2
IRF9-213ENST00000561342 KDM6AO15550 1401 aaPredicted RBP16.29■□□□□ 0.2
IRF9-213ENST00000561342 ARFGEF1Q9Y6D6 1849 aa16.29■□□□□ 0.2
IRF9-213ENST00000561342 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
IRF9-213ENST00000561342 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
IRF9-213ENST00000561342 WBP1LQ9NX94 342 aa16.29■□□□□ 0.2
IRF9-213ENST00000561342 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■□□□□ 11.2
IRF9-213ENST00000561342 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
IRF9-213ENST00000561342 POTECB2RU33 542 aa16.28■□□□□ 0.2
IRF9-213ENST00000561342 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
IRF9-213ENST00000561342 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
IRF9-213ENST00000561342 VEGFBP49765 207 aa16.27■□□□□ 0.2
IRF9-213ENST00000561342 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.19
IRF9-213ENST00000561342 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
IRF9-213ENST00000561342 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
IRF9-213ENST00000561342 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
IRF9-213ENST00000561342 EIF4G2P78344 907 aaKnown RBP eCLIP16.25■□□□□ 0.19
IRF9-213ENST00000561342 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
IRF9-213ENST00000561342 MAP2P11137 1827 aaKnown RBP16.24■□□□□ 0.19
IRF9-213ENST00000561342 HSPA8P11142 646 aaKnown RBP16.24■□□□□ 0.19
IRF9-213ENST00000561342 MAP2K1Q02750 393 aaPredicted RBP16.24■□□□□ 0.19
IRF9-213ENST00000561342 DDR1Q08345 913 aa16.24■□□□□ 0.19
IRF9-213ENST00000561342 EYA1Q99502 592 aa16.24■□□□□ 0.19
IRF9-213ENST00000561342 ANKRD26Q9UPS8 1709 aa16.24■□□□□ 0.19
IRF9-213ENST00000561342 TMEM88BA6NKF7 163 aa16.23■□□□□ 0.19
IRF9-213ENST00000561342 FKBP8Q14318 412 aa16.23■□□□□ 0.19
IRF9-213ENST00000561342 IFNL2Q8IZJ0 200 aa16.22■□□□□ 0.19
IRF9-213ENST00000561342 TTLL6Q8N841 843 aa16.22■□□□□ 0.19
IRF9-213ENST00000561342 KDRP35968 1356 aa16.22■□□□□ 0.19
IRF9-213ENST00000561342 ITGB4P16144 1822 aa16.22■□□□□ 0.19
IRF9-213ENST00000561342 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms