RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 A0A1B0GTH6 734 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 GPR25O00155 361 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 RAD21O60216 631 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 INHAP05111 366 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 GTF2E1P29083 439 aaPredicted RBP8.37□□□□□ -1.07
CASC4-211ENST00000561305 PHKA2P46019 1235 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 TMEM132AQ24JP5 1023 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
CASC4-211ENST00000561305 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 GTPBP3Q969Y2 492 aaKnown RBP8.37□□□□□ -1.07
CASC4-211ENST00000561305 ADAMTS8Q9UP79 889 aa8.37□□□□□ -1.07
CASC4-211ENST00000561305 LZTS3O60299 673 aaPredicted RBP8.36□□□□□ -1.07
CASC4-211ENST00000561305 THBS1P07996 1170 aa8.36□□□□□ -1.07
CASC4-211ENST00000561305 UBTFP17480 764 aaKnown RBP8.36□□□□□ -1.07
CASC4-211ENST00000561305 TLR1Q15399 786 aa8.36□□□□□ -1.07
CASC4-211ENST00000561305 SVOPQ8N4V2 548 aa8.36□□□□□ -1.07
CASC4-211ENST00000561305 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
CASC4-211ENST00000561305 NUCKS1Q9H1E3 243 aaKnown RBP8.36□□□□□ -1.07
CASC4-211ENST00000561305 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
CASC4-211ENST00000561305 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
CASC4-211ENST00000561305 PCDHGA11Q9Y5H2 935 aa8.35□□□□□ -1.07
CASC4-211ENST00000561305 TMEM229AB2RXF0 380 aa8.34□□□□□ -1.07
CASC4-211ENST00000561305 SKIP12755 728 aa8.34□□□□□ -1.07
CASC4-211ENST00000561305 LYPD4Q6UWN0 246 aa8.34□□□□□ -1.07
CASC4-211ENST00000561305 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
CASC4-211ENST00000561305 SLC4A9Q96Q91 983 aa8.34□□□□□ -1.07
CASC4-211ENST00000561305 GPAMQ9HCL2 828 aa8.34□□□□□ -1.07
CASC4-211ENST00000561305 CELA2BP08218 269 aaPredicted RBP8.33□□□□□ -1.08
CASC4-211ENST00000561305 MSX1P28360 303 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 GSK3AP49840 483 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 SMTNP53814 917 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 LBRQ14739 615 aaKnown RBP8.33□□□□□ -1.08
CASC4-211ENST00000561305 EML3Q32P44 896 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 ADAMTS19Q8TE59 1207 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 CFHR5Q9BXR6 569 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 IGF1RP08069 1367 aa8.33□□□□□ -1.08
CASC4-211ENST00000561305 POM121CA8CG34 1229 aa8.32□□□□□ -1.08
CASC4-211ENST00000561305 UBAP2LQ14157 1087 aaKnown RBP8.32□□□□□ -1.08
CASC4-211ENST00000561305 MTFR1Q15390 333 aa8.32□□□□□ -1.08
CASC4-211ENST00000561305 ZNF295-AS1Q8N0V1 137 aa8.32□□□□□ -1.08
CASC4-211ENST00000561305 NOD1Q9Y239 953 aa8.32□□□□□ -1.08
CASC4-211ENST00000561305 NCOA4Q13772 614 aa8.3□□□□□ -1.08
CASC4-211ENST00000561305 NIFKQ9BYG3 293 aaKnown RBP8.3□□□□□ -1.08
CASC4-211ENST00000561305 CRISPLD1Q9H336 500 aa8.3□□□□□ -1.08
CASC4-211ENST00000561305 SERTAD1Q9UHV2 236 aa8.3□□□□□ -1.08
CASC4-211ENST00000561305 IQSEC3Q9UPP2 1182 aaPredicted RBP8.3□□□□□ -1.08
CASC4-211ENST00000561305 A6NJY4 79 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 USP17L5A8MUK1 530 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 CDK2AP1O14519 115 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 CSB-PGBD3P0DP91 1061 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 MX2P20592 715 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 PLA2G4AP47712 749 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 GTF2IP78347 998 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 PGBD3Q8N328 593 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 ACDQ96AP0 544 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 RUBCNLQ9H714 662 aa8.29□□□□□ -1.08
CASC4-211ENST00000561305 MAP3K10Q02779 954 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 EFHC2Q5JST6 749 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 HDGFL1Q5TGJ6 251 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 TBC1D9Q6ZT07 1266 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 PLEKHM2Q8IWE5 1019 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 C1orf216Q8TAB5 229 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 NSFL1CQ9UNZ2 370 aaKnown RBP8.28□□□□□ -1.08
CASC4-211ENST00000561305 PHF24Q9UPV7 400 aa8.28□□□□□ -1.08
CASC4-211ENST00000561305 RNF225M0QZC1 329 aaPredicted RBP8.27□□□□□ -1.09
CASC4-211ENST00000561305 BCRP11274 1271 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 ATP4AP20648 1035 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 DEPDC4Q8N2C3 294 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
CASC4-211ENST00000561305 UCN2Q96RP3 112 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 LRRC4BQ9NT99 713 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 NDFIP2Q9NV92 336 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 USP3Q9Y6I4 520 aa8.27□□□□□ -1.09
CASC4-211ENST00000561305 BACH1O14867 736 aa8.26□□□□□ -1.09
CASC4-211ENST00000561305 MAP2K3P46734 347 aa8.26□□□□□ -1.09
CASC4-211ENST00000561305 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
CASC4-211ENST00000561305 RASSF7Q02833 373 aa8.26□□□□□ -1.09
CASC4-211ENST00000561305 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
CASC4-211ENST00000561305 ENAMQ9NRM1 1142 aa8.26□□□□□ -1.09
CASC4-211ENST00000561305 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
CASC4-211ENST00000561305 ATP9BO43861 1147 aa8.25□□□□□ -1.09
CASC4-211ENST00000561305 TRIM50Q86XT4 487 aa8.25□□□□□ -1.09
CASC4-211ENST00000561305 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.25□□□□□ -1.09
CASC4-211ENST00000561305 DNAAF2Q9NVR5 837 aaKnown RBP8.25□□□□□ -1.09
CASC4-211ENST00000561305 ZNF358Q9NW07 568 aa8.25□□□□□ -1.09
CASC4-211ENST00000561305 ATXN7L1Q9ULK2 861 aaPredicted RBP8.25□□□□□ -1.09
CASC4-211ENST00000561305 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 BNIP3LO60238 219 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 EPHA4P54764 986 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 USP17L2Q6R6M4 530 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 NLRP8Q86W28 1048 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 PROSER2Q86WR7 435 aaPredicted RBP8.24□□□□□ -1.09
CASC4-211ENST00000561305 SCARF2Q96GP6 870 aaPredicted RBP8.24□□□□□ -1.09
CASC4-211ENST00000561305 ZDHHC3Q9NYG2 299 aa8.24□□□□□ -1.09
CASC4-211ENST00000561305 OIP5O43482 229 aa8.23□□□□□ -1.09
CASC4-211ENST00000561305 FOXK2Q01167 660 aa8.23□□□□□ -1.09
CASC4-211ENST00000561305 PSME1Q06323 249 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms