RNA–Protein interactions for RNA: ENST00000561248.1

COPS2-208, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-208ENST00000561248 USP17L10C9JJH3 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L13C9JLJ4 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L12C9JPN9 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L11C9JVI0 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L21D6R901 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L18D6R9N7 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L22D6RA61 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L17D6RBQ6 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L19D6RCP7 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L20D6RJB6 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 BACH1O14867 736 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 USP17L24Q0WX57 530 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 PTK7Q13308 1070 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 CRTC2Q53ET0 693 aaPredicted RBP9.26□□□□□ -0.93
COPS2-208ENST00000561248 LYSMD3Q7Z3D4 306 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 PBXIP1Q96AQ6 731 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 SLC4A9Q96Q91 983 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 GRIP2Q9C0E4 1043 aa9.26□□□□□ -0.93
COPS2-208ENST00000561248 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
COPS2-208ENST00000561248 SOBPA7XYQ1 873 aa9.25□□□□□ -0.93
COPS2-208ENST00000561248 SRPK2P78362 688 aaKnown RBP9.25□□□□□ -0.93
COPS2-208ENST00000561248 TLR1Q15399 786 aa9.25□□□□□ -0.93
COPS2-208ENST00000561248 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
COPS2-208ENST00000561248 FHDC1Q9C0D6 1143 aaPredicted RBP9.25□□□□□ -0.93
COPS2-208ENST00000561248 ZNF358Q9NW07 568 aa9.25□□□□□ -0.93
COPS2-208ENST00000561248 DKK1O94907 266 aa9.24□□□□□ -0.93
COPS2-208ENST00000561248 GTF2E1P29083 439 aaPredicted RBP9.24□□□□□ -0.93
COPS2-208ENST00000561248 SMTNP53814 917 aa9.24□□□□□ -0.93
COPS2-208ENST00000561248 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
COPS2-208ENST00000561248 SERTAD1Q9UHV2 236 aa9.24□□□□□ -0.93
COPS2-208ENST00000561248 M0R2N6 131 aa9.23□□□□□ -0.93
COPS2-208ENST00000561248 SEC13P55735 322 aa9.23□□□□□ -0.93
COPS2-208ENST00000561248 CDCA8Q53HL2 280 aa9.23□□□□□ -0.93
COPS2-208ENST00000561248 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
COPS2-208ENST00000561248 SPATA31C2B4DYI2 1134 aa9.22□□□□□ -0.93
COPS2-208ENST00000561248 MTFR1Q15390 333 aa9.22□□□□□ -0.93
COPS2-208ENST00000561248 ANKMY2Q8IV38 441 aa9.22□□□□□ -0.93
COPS2-208ENST00000561248 A6NJY4 79 aa9.21□□□□□ -0.94
COPS2-208ENST00000561248 PPP1R15AO75807 674 aaPredicted RBP9.21□□□□□ -0.94
COPS2-208ENST00000561248 ATG7O95352 703 aa9.21□□□□□ -0.94
COPS2-208ENST00000561248 DPYDQ12882 1025 aa9.21□□□□□ -0.94
COPS2-208ENST00000561248 ELOAQ14241 798 aaKnown RBP9.21□□□□□ -0.94
COPS2-208ENST00000561248 TMEM214Q6NUQ4 689 aaKnown RBP9.21□□□□□ -0.94
COPS2-208ENST00000561248 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.94
COPS2-208ENST00000561248 SFI1A8K8P3 1242 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 CDK2AP1O14519 115 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 WDR44Q5JSH3 913 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 GNASQ5JWF2 1037 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 NBPF10Q6P3W6 841 aaKnown RBP9.2□□□□□ -0.94
COPS2-208ENST00000561248 NBPF15Q8N660 670 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 ARXQ96QS3 562 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 ARID3AQ99856 593 aa9.2□□□□□ -0.94
COPS2-208ENST00000561248 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
COPS2-208ENST00000561248 EPHA4P54764 986 aa9.19□□□□□ -0.94
COPS2-208ENST00000561248 PTSQ03393 145 aa9.19□□□□□ -0.94
COPS2-208ENST00000561248 TAS1R3Q7RTX0 852 aa9.19□□□□□ -0.94
COPS2-208ENST00000561248 FAM200AQ8TCP9 573 aa9.19□□□□□ -0.94
COPS2-208ENST00000561248 RHBDD1Q8TEB9 315 aa9.19□□□□□ -0.94
COPS2-208ENST00000561248 SCHIP1Q9P0W5 487 aaPredicted RBP9.19□□□□□ -0.94
COPS2-208ENST00000561248 RHOQP17081 205 aa9.18□□□□□ -0.94
COPS2-208ENST00000561248 POU4F2Q12837 409 aa9.18□□□□□ -0.94
COPS2-208ENST00000561248 IQSEC3Q9UPP2 1182 aaPredicted RBP9.18□□□□□ -0.94
COPS2-208ENST00000561248 FOXK2Q01167 660 aa9.17□□□□□ -0.94
COPS2-208ENST00000561248 TNS4Q8IZW8 715 aa9.17□□□□□ -0.94
COPS2-208ENST00000561248 TSEN2Q8NCE0 465 aaKnown RBP9.17□□□□□ -0.94
COPS2-208ENST00000561248 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
COPS2-208ENST00000561248 NXF1Q9UBU9 619 aaKnown RBP9.17□□□□□ -0.94
COPS2-208ENST00000561248 SLC35F4A4IF30 521 aa9.16□□□□□ -0.94
COPS2-208ENST00000561248 C4orf17Q53FE4 359 aa9.16□□□□□ -0.94
COPS2-208ENST00000561248 NPAS3Q8IXF0 933 aa9.16□□□□□ -0.94
COPS2-208ENST00000561248 ZMIZ1Q9ULJ6 1067 aa9.16□□□□□ -0.94
COPS2-208ENST00000561248 SENP3-EIF4A1A0A087X0R7 540 aa9.15□□□□□ -0.94
COPS2-208ENST00000561248 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
COPS2-208ENST00000561248 TIMMDC1Q9NPL8 285 aa9.15□□□□□ -0.94
COPS2-208ENST00000561248 DYRK1BQ9Y463 629 aa9.15□□□□□ -0.94
COPS2-208ENST00000561248 ACIN1Q9UKV3 1341 aaKnown RBP9.14□□□□□ -0.95
COPS2-208ENST00000561248 SLC9A9Q8IVB4 645 aa9.14□□□□□ -0.95
COPS2-208ENST00000561248 ZNF295-AS1Q8N0V1 137 aa9.14□□□□□ -0.95
COPS2-208ENST00000561248 HINFPQ9BQA5 517 aa9.14□□□□□ -0.95
COPS2-208ENST00000561248 USP3Q9Y6I4 520 aa9.14□□□□□ -0.95
COPS2-208ENST00000561248 A0A1B0GTH6 734 aa9.13□□□□□ -0.95
COPS2-208ENST00000561248 PHKA2P46019 1235 aa9.13□□□□□ -0.95
COPS2-208ENST00000561248 SWI5Q1ZZU3 235 aa9.13□□□□□ -0.95
COPS2-208ENST00000561248 STK32AQ8WU08 396 aa9.13□□□□□ -0.95
COPS2-208ENST00000561248 TSPAN10Q9H1Z9 355 aaPredicted RBP9.13□□□□□ -0.95
COPS2-208ENST00000561248 CABP1Q9NZU7 370 aa9.13□□□□□ -0.95
COPS2-208ENST00000561248 TERTO14746 1132 aaKnown RBP9.12□□□□□ -0.95
COPS2-208ENST00000561248 PPFIA3O75145 1194 aa9.12□□□□□ -0.95
COPS2-208ENST00000561248 PLA2G4AP47712 749 aa9.12□□□□□ -0.95
COPS2-208ENST00000561248 H3BM21 787 aa9.11□□□□□ -0.95
COPS2-208ENST00000561248 PSMA6P60900 246 aaKnown RBP9.11□□□□□ -0.95
COPS2-208ENST00000561248 TEAD4Q15561 434 aa9.11□□□□□ -0.95
COPS2-208ENST00000561248 TBCELQ5QJ74 424 aa9.11□□□□□ -0.95
COPS2-208ENST00000561248 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
COPS2-208ENST00000561248 GAS2L2Q8NHY3 880 aa9.11□□□□□ -0.95
COPS2-208ENST00000561248 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
COPS2-208ENST00000561248 CHMP3Q9Y3E7 222 aa9.11□□□□□ -0.95
COPS2-208ENST00000561248 ITGA6P23229 1130 aa9.1□□□□□ -0.95
COPS2-208ENST00000561248 FAM69CQ0P6D2 419 aa9.1□□□□□ -0.95
COPS2-208ENST00000561248 NBPF1Q3BBV0 1214 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms