RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 SIPA1L3O60292 1781 aaPredicted RBP20.6■□□□□ 0.89
MEIS3-209ENST00000561040 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
MEIS3-209ENST00000561040 NHSL1Q5SYE7 1610 aa20.58■□□□□ 0.89
MEIS3-209ENST00000561040 PXDNLA1KZ92 1463 aa20.58■□□□□ 0.89
MEIS3-209ENST00000561040 TATP17735 454 aaPredicted RBP20.57■□□□□ 0.88
MEIS3-209ENST00000561040 NUCB1Q02818 461 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 LGR6Q9HBX8 967 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 NLRP2Q9NX02 1062 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 SPG7Q9UQ90 795 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 MSH5O43196 834 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 SCN11AQ9UI33 1791 aa20.57■□□□□ 0.88
MEIS3-209ENST00000561040 CSB-PGBD3P0DP91 1061 aa20.56■□□□□ 0.88
MEIS3-209ENST00000561040 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
MEIS3-209ENST00000561040 RPAP2Q8IXW5 612 aaPredicted RBP20.56■□□□□ 0.88
MEIS3-209ENST00000561040 PKD1L3Q7Z443 1732 aa20.56■□□□□ 0.88
MEIS3-209ENST00000561040 BTBD11A6QL63 1104 aa20.55■□□□□ 0.88
MEIS3-209ENST00000561040 FLIIQ13045 1269 aa20.55■□□□□ 0.88
MEIS3-209ENST00000561040 ABCA3Q99758 1704 aa20.55■□□□□ 0.88
MEIS3-209ENST00000561040 HDGFL1Q5TGJ6 251 aa20.55■□□□□ 0.88
MEIS3-209ENST00000561040 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
MEIS3-209ENST00000561040 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
MEIS3-209ENST00000561040 CABLES1Q8TDN4 633 aa20.54■□□□□ 0.88
MEIS3-209ENST00000561040 CHD1LQ86WJ1 897 aa20.53■□□□□ 0.88
MEIS3-209ENST00000561040 PARP4Q9UKK3 1724 aaKnown RBP20.53■□□□□ 0.88
MEIS3-209ENST00000561040 G2E3Q7L622 706 aa20.53■□□□□ 0.88
MEIS3-209ENST00000561040 ANKRD44Q8N8A2 993 aa20.53■□□□□ 0.88
MEIS3-209ENST00000561040 C1orf115Q9H7X2 142 aa20.53■□□□□ 0.88
MEIS3-209ENST00000561040 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
MEIS3-209ENST00000561040 FKBP5Q13451 457 aaPredicted RBP20.52■□□□□ 0.88
MEIS3-209ENST00000561040 ZBTB47Q9UFB7 747 aaPredicted RBP20.52■□□□□ 0.88
MEIS3-209ENST00000561040 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
MEIS3-209ENST00000561040 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
MEIS3-209ENST00000561040 SIRT2Q8IXJ6 389 aa20.5■□□□□ 0.87
MEIS3-209ENST00000561040 MEGF6O75095 1541 aa20.5■□□□□ 0.87
MEIS3-209ENST00000561040 CHRNA2Q15822 529 aa20.5■□□□□ 0.87
MEIS3-209ENST00000561040 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
MEIS3-209ENST00000561040 HMMRO75330 724 aa20.49■□□□□ 0.87
MEIS3-209ENST00000561040 GNAI3P08754 354 aa20.49■□□□□ 0.87
MEIS3-209ENST00000561040 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
MEIS3-209ENST00000561040 DCTPP1Q9H773 170 aa20.49■□□□□ 0.87
MEIS3-209ENST00000561040 PRDM11Q9NQV5 511 aa20.49■□□□□ 0.87
MEIS3-209ENST00000561040 HEG1Q9ULI3 1381 aa20.48■□□□□ 0.87
MEIS3-209ENST00000561040 PHKG2P15735 406 aa20.48■□□□□ 0.87
MEIS3-209ENST00000561040 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
MEIS3-209ENST00000561040 MRC1P22897 1456 aa20.48■□□□□ 0.87
MEIS3-209ENST00000561040 WDR17Q8IZU2 1322 aa20.48■□□□□ 0.87
MEIS3-209ENST00000561040 ANKRD45Q5TZF3 282 aa20.48■□□□□ 0.87
MEIS3-209ENST00000561040 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
MEIS3-209ENST00000561040 MEIS3Q99687 375 aa20.47■□□□□ 0.87
MEIS3-209ENST00000561040 DBF4Q9UBU7 674 aaPredicted RBP20.46■□□□□ 0.87
MEIS3-209ENST00000561040 F6X3S4 739 aa20.46■□□□□ 0.87
MEIS3-209ENST00000561040 GNAI2P04899 355 aa20.46■□□□□ 0.87
MEIS3-209ENST00000561040 NECTIN2Q92692 538 aa20.46■□□□□ 0.87
MEIS3-209ENST00000561040 DCAF5Q96JK2 942 aa20.46■□□□□ 0.87
MEIS3-209ENST00000561040 LNPKQ9C0E8 428 aa20.46■□□□□ 0.87
MEIS3-209ENST00000561040 SLC52A2Q9HAB3 445 aa20.45■□□□□ 0.86
MEIS3-209ENST00000561040 COL5A2P05997 1499 aaPredicted RBP20.45■□□□□ 0.86
MEIS3-209ENST00000561040 KDM6AO15550 1401 aaPredicted RBP20.45■□□□□ 0.86
MEIS3-209ENST00000561040 EIF2S2P20042 333 aaKnown RBP20.44■□□□□ 0.86
MEIS3-209ENST00000561040 GIGYF1O75420 1035 aaPredicted RBP20.43■□□□□ 0.86
MEIS3-209ENST00000561040 KCNQ3O43525 872 aa20.43■□□□□ 0.86
MEIS3-209ENST00000561040 BMP2KLQ5H9B9 411 aa20.43■□□□□ 0.86
MEIS3-209ENST00000561040 CHPF2Q9P2E5 772 aa20.42■□□□□ 0.86
MEIS3-209ENST00000561040 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
MEIS3-209ENST00000561040 ZNF790Q6PG37 636 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 CARD10Q9BWT7 1032 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 PCDH11XQ9BZA7 1347 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 PCDH11YQ9BZA8 1340 aa20.4■□□□□ 0.86
MEIS3-209ENST00000561040 PHAXQ9H814 394 aaKnown RBP20.39■□□□□ 0.86
MEIS3-209ENST00000561040 AHDC1Q5TGY3 1603 aaPredicted RBP20.39■□□□□ 0.85
MEIS3-209ENST00000561040 DNAAF4Q8WXU2 420 aa20.39■□□□□ 0.85
MEIS3-209ENST00000561040 CYP27B1O15528 508 aa20.38■□□□□ 0.85
MEIS3-209ENST00000561040 DAXXQ9UER7 740 aaPredicted RBP20.38■□□□□ 0.85
MEIS3-209ENST00000561040 HDAC5Q9UQL6 1122 aa20.38■□□□□ 0.85
MEIS3-209ENST00000561040 ROBO1Q9Y6N7 1651 aa20.37■□□□□ 0.85
MEIS3-209ENST00000561040 COL22A1Q8NFW1 1626 aaPredicted RBP20.37■□□□□ 0.85
MEIS3-209ENST00000561040 UBTFL1P0CB47 393 aaPredicted RBP20.37■□□□□ 0.85
MEIS3-209ENST00000561040 TTC5Q8N0Z6 440 aa20.37■□□□□ 0.85
MEIS3-209ENST00000561040 C5P01031 1676 aa20.36■□□□□ 0.85
MEIS3-209ENST00000561040 COL14A1Q05707 1796 aaKnown RBP20.36■□□□□ 0.85
MEIS3-209ENST00000561040 DDX58O95786 925 aaKnown RBP20.36■□□□□ 0.85
MEIS3-209ENST00000561040 ATP8B2P98198 1209 aa20.36■□□□□ 0.85
MEIS3-209ENST00000561040 NFATC2IPQ8NCF5 419 aa20.36■□□□□ 0.85
MEIS3-209ENST00000561040 ZCRB1Q8TBF4 217 aaKnown RBP20.36■□□□□ 0.85
MEIS3-209ENST00000561040 DDX21Q9NR30 783 aaKnown RBP eCLIP20.36■□□□□ 0.85
MEIS3-209ENST00000561040 SEC24BO95487 1268 aa20.35■□□□□ 0.85
MEIS3-209ENST00000561040 IL2RBP14784 551 aa20.35■□□□□ 0.85
MEIS3-209ENST00000561040 USP44Q9H0E7 712 aa20.35■□□□□ 0.85
MEIS3-209ENST00000561040 LAMB4A4D0S4 1761 aa20.35■□□□□ 0.85
MEIS3-209ENST00000561040 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 ALDH1L1O75891 902 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 CABP4P57796 275 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 EVA1CP58658 441 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 TBC1D32Q96NH3 1257 aa20.34■□□□□ 0.85
MEIS3-209ENST00000561040 IBTKQ9P2D0 1353 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms