RNA–Protein interactions for RNA: ENST00000560663.5

MIR9-3HG-210, Transcript of MIR9-3 host gene, humanhuman

TSL 4

Gene MIR9-3HG, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-210ENST00000560663 ADAMTS8Q9UP79 889 aa22.56■■□□□ 1.2
MIR9-3HG-210ENST00000560663 CEMIPQ8WUJ3 1361 aa22.55■■□□□ 1.2
MIR9-3HG-210ENST00000560663 ANP32CO43423 234 aa22.55■■□□□ 1.2
MIR9-3HG-210ENST00000560663 SLC15A2Q16348 729 aa22.54■■□□□ 1.2
MIR9-3HG-210ENST00000560663 PDGFDQ9GZP0 370 aaPredicted RBP22.54■■□□□ 1.2
MIR9-3HG-210ENST00000560663 LOC102724428A0A0B4J2F2 783 aa22.53■■□□□ 1.2
MIR9-3HG-210ENST00000560663 SIK1P57059 783 aa22.53■■□□□ 1.2
MIR9-3HG-210ENST00000560663 SCN11AQ9UI33 1791 aa22.53■■□□□ 1.2
MIR9-3HG-210ENST00000560663 ITPK1Q13572 414 aa22.52■■□□□ 1.2
MIR9-3HG-210ENST00000560663 DCTN1Q14203 1278 aa22.51■■□□□ 1.19
MIR9-3HG-210ENST00000560663 NFE2L2Q16236 605 aa22.51■■□□□ 1.19
MIR9-3HG-210ENST00000560663 MCM10Q7L590 875 aa22.51■■□□□ 1.19
MIR9-3HG-210ENST00000560663 CCDC146Q8IYE0 955 aa22.51■■□□□ 1.19
MIR9-3HG-210ENST00000560663 STK32BQ9NY57 414 aa22.51■■□□□ 1.19
MIR9-3HG-210ENST00000560663 SLC39A6Q13433 755 aa22.5■■□□□ 1.19
MIR9-3HG-210ENST00000560663 LINC00116Q8NCU8 138 aa22.5■■□□□ 1.19
MIR9-3HG-210ENST00000560663 WDR43Q15061 677 aaKnown RBP eCLIP22.49■■□□□ 1.19
MIR9-3HG-210ENST00000560663 HTATSF1O43719 755 aaKnown RBP22.48■■□□□ 1.19
MIR9-3HG-210ENST00000560663 AMIGO3Q86WK7 504 aa22.48■■□□□ 1.19
MIR9-3HG-210ENST00000560663 PNISRQ8TF01 805 aaKnown RBP22.47■■□□□ 1.19
MIR9-3HG-210ENST00000560663 PNNQ9H307 717 aaKnown RBP22.47■■□□□ 1.19
MIR9-3HG-210ENST00000560663 PTCD1O75127 700 aaKnown RBP22.46■■□□□ 1.19
MIR9-3HG-210ENST00000560663 ATP6V1AP38606 617 aa22.46■■□□□ 1.19
MIR9-3HG-210ENST00000560663 MAPK8IP3Q9UPT6 1336 aa22.46■■□□□ 1.19
MIR9-3HG-210ENST00000560663 TMPOP42166 694 aaKnown RBP22.45■■□□□ 1.18
MIR9-3HG-210ENST00000560663 RUNDC1Q96C34 613 aa22.45■■□□□ 1.18
MIR9-3HG-210ENST00000560663 RBM42Q9BTD8 480 aaKnown RBP22.45■■□□□ 1.18
MIR9-3HG-210ENST00000560663 PNPLA7Q6ZV29 1317 aa22.45■■□□□ 1.18
MIR9-3HG-210ENST00000560663 KCPQ6ZWJ8 1503 aa22.45■■□□□ 1.18
MIR9-3HG-210ENST00000560663 KCNQ3O43525 872 aa22.44■■□□□ 1.18
MIR9-3HG-210ENST00000560663 TEFQ10587 303 aa22.44■■□□□ 1.18
MIR9-3HG-210ENST00000560663 RTF1Q92541 710 aaKnown RBP22.44■■□□□ 1.18
MIR9-3HG-210ENST00000560663 THUMPD2Q9BTF0 503 aaKnown RBP22.44■■□□□ 1.18
MIR9-3HG-210ENST00000560663 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
MIR9-3HG-210ENST00000560663 SMIM5Q71RC9 77 aa22.43■■□□□ 1.18
MIR9-3HG-210ENST00000560663 RRP7AQ9Y3A4 280 aaKnown RBP22.43■■□□□ 1.18
MIR9-3HG-210ENST00000560663 NEFMP07197 916 aa22.42■■□□□ 1.18
MIR9-3HG-210ENST00000560663 RIPK4P57078 832 aa22.42■■□□□ 1.18
MIR9-3HG-210ENST00000560663 CASZ1Q86V15 1759 aa22.41■■□□□ 1.18
MIR9-3HG-210ENST00000560663 TFCP2L1Q9NZI6 479 aa22.41■■□□□ 1.18
MIR9-3HG-210ENST00000560663 SIPA1L3O60292 1781 aaPredicted RBP22.4■■□□□ 1.18
MIR9-3HG-210ENST00000560663 C5P01031 1676 aa22.4■■□□□ 1.18
MIR9-3HG-210ENST00000560663 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
MIR9-3HG-210ENST00000560663 TRIM35Q9UPQ4 493 aa22.4■■□□□ 1.18
MIR9-3HG-210ENST00000560663 C4BP0C0L5 1744 aa22.4■■□□□ 1.18
MIR9-3HG-210ENST00000560663 BTBD11A6QL63 1104 aa22.39■■□□□ 1.17
MIR9-3HG-210ENST00000560663 COL23A1Q86Y22 540 aaPredicted RBP22.39■■□□□ 1.17
MIR9-3HG-210ENST00000560663 ZNF496Q96IT1 587 aaPredicted RBP22.39■■□□□ 1.17
MIR9-3HG-210ENST00000560663 ZNF831Q5JPB2 1677 aa22.39■■□□□ 1.17
MIR9-3HG-210ENST00000560663 VIRMAQ69YN4 1812 aaKnown RBP22.38■■□□□ 1.17
MIR9-3HG-210ENST00000560663 TAF1LQ8IZX4 1826 aa22.38■■□□□ 1.17
MIR9-3HG-210ENST00000560663 DNAJC10Q8IXB1 793 aa22.38■■□□□ 1.17
MIR9-3HG-210ENST00000560663 MIS18AQ9NYP9 233 aa22.38■■□□□ 1.17
MIR9-3HG-210ENST00000560663 APAF1O14727 1248 aa22.37■■□□□ 1.17
MIR9-3HG-210ENST00000560663 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
MIR9-3HG-210ENST00000560663 CNTNAP4Q9C0A0 1308 aa22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 TAF7Q15545 349 aaPredicted RBP22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 NEUROD2Q15784 382 aa22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 VSIG10Q8N0Z9 540 aa22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 AK7Q96M32 723 aa22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 TJP1Q07157 1748 aa22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 TUBGCP6Q96RT7 1819 aa22.36■■□□□ 1.17
MIR9-3HG-210ENST00000560663 CICQ96RK0 1608 aaPredicted RBP22.35■■□□□ 1.17
MIR9-3HG-210ENST00000560663 RC3H1Q5TC82 1133 aaKnown RBP22.35■■□□□ 1.17
MIR9-3HG-210ENST00000560663 INTS5Q6P9B9 1019 aaKnown RBP22.35■■□□□ 1.17
MIR9-3HG-210ENST00000560663 TTC5Q8N0Z6 440 aa22.35■■□□□ 1.17
MIR9-3HG-210ENST00000560663 DLG5Q8TDM6 1919 aa22.35■■□□□ 1.17
MIR9-3HG-210ENST00000560663 UBR2Q8IWV8 1755 aa22.35■■□□□ 1.17
MIR9-3HG-210ENST00000560663 CYP19A1P11511 503 aaPredicted RBP22.34■■□□□ 1.17
MIR9-3HG-210ENST00000560663 CRKLP46109 303 aaKnown RBP22.34■■□□□ 1.17
MIR9-3HG-210ENST00000560663 HEG1Q9ULI3 1381 aa22.34■■□□□ 1.17
MIR9-3HG-210ENST00000560663 GNPATO15228 680 aa22.33■■□□□ 1.17
MIR9-3HG-210ENST00000560663 PTGER2P43116 358 aa22.33■■□□□ 1.17
MIR9-3HG-210ENST00000560663 SGIP1Q9BQI5 828 aa22.33■■□□□ 1.17
MIR9-3HG-210ENST00000560663 COL5A3P25940 1745 aaPredicted RBP22.32■■□□□ 1.16
MIR9-3HG-210ENST00000560663 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.32■■□□□ 1.16
MIR9-3HG-210ENST00000560663 PRAMEF22A3QJZ6 481 aa22.32■■□□□ 1.16
MIR9-3HG-210ENST00000560663 HMGB2P26583 209 aaKnown RBP22.32■■□□□ 1.16
MIR9-3HG-210ENST00000560663 FMNL2Q96PY5 1086 aa22.32■■□□□ 1.16
MIR9-3HG-210ENST00000560663 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
MIR9-3HG-210ENST00000560663 QSER1Q2KHR3 1735 aa22.31■■□□□ 1.16
MIR9-3HG-210ENST00000560663 PHF14O94880 888 aa22.31■■□□□ 1.16
MIR9-3HG-210ENST00000560663 SSFA2P28290 1259 aa22.31■■□□□ 1.16
MIR9-3HG-210ENST00000560663 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
MIR9-3HG-210ENST00000560663 MTFR1LQ9H019 292 aa22.31■■□□□ 1.16
MIR9-3HG-210ENST00000560663 LRP5O75197 1615 aa22.31■■□□□ 1.16
MIR9-3HG-210ENST00000560663 SENP3-EIF4A1A0A087X0R7 540 aa22.3■■□□□ 1.16
MIR9-3HG-210ENST00000560663 RPS6KA4O75676 772 aa22.3■■□□□ 1.16
MIR9-3HG-210ENST00000560663 SPON1Q9HCB6 807 aa22.3■■□□□ 1.16
MIR9-3HG-210ENST00000560663 MYH14Q7Z406 1995 aaKnown RBP22.29■■□□□ 1.16
MIR9-3HG-210ENST00000560663 SLC16A10Q8TF71 515 aa22.29■■□□□ 1.16
MIR9-3HG-210ENST00000560663 UBR3Q6ZT12 1888 aa22.28■■□□□ 1.16
MIR9-3HG-210ENST00000560663 EIF4A1P60842 406 aaKnown RBP22.28■■□□□ 1.16
MIR9-3HG-210ENST00000560663 FLAD1Q8NFF5 587 aa22.28■■□□□ 1.16
MIR9-3HG-210ENST00000560663 CCDC87Q9NVE4 849 aa22.28■■□□□ 1.16
MIR9-3HG-210ENST00000560663 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
MIR9-3HG-210ENST00000560663 DIEXFQ68CQ4 756 aaKnown RBP22.27■■□□□ 1.16
MIR9-3HG-210ENST00000560663 ARHGEF1Q92888 912 aaKnown RBP22.27■■□□□ 1.16
MIR9-3HG-210ENST00000560663 RTCBQ9Y3I0 505 aaKnown RBP22.27■■□□□ 1.16
MIR9-3HG-210ENST00000560663 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms