RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 ANAPC15P60006 121 aa21.7■■□□□ 1.06
TRPM1-211ENST00000560658 CLCN1P35523 988 aa21.69■■□□□ 1.06
TRPM1-211ENST00000560658 FAM208AQ9UK61 1670 aaKnown RBP21.69■■□□□ 1.06
TRPM1-211ENST00000560658 MAP3K5Q99683 1374 aa21.69■■□□□ 1.06
TRPM1-211ENST00000560658 ATP8B2P98198 1209 aa21.69■■□□□ 1.06
TRPM1-211ENST00000560658 IL17RAQ96F46 866 aa21.69■■□□□ 1.06
TRPM1-211ENST00000560658 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
TRPM1-211ENST00000560658 SSFA2P28290 1259 aa21.68■■□□□ 1.06
TRPM1-211ENST00000560658 FLIIQ13045 1269 aa21.68■■□□□ 1.06
TRPM1-211ENST00000560658 STAP2Q9UGK3 403 aa21.68■■□□□ 1.06
TRPM1-211ENST00000560658 CEP170BQ9Y4F5 1589 aaPredicted RBP21.68■■□□□ 1.06
TRPM1-211ENST00000560658 SALL3Q9BXA9 1300 aa21.68■■□□□ 1.06
TRPM1-211ENST00000560658 TAF7Q15545 349 aaPredicted RBP21.66■■□□□ 1.06
TRPM1-211ENST00000560658 ADAMTSL3P82987 1691 aa21.66■■□□□ 1.06
TRPM1-211ENST00000560658 HOXB7P09629 217 aa21.66■■□□□ 1.06
TRPM1-211ENST00000560658 SLC4A10Q6U841 1118 aa21.66■■□□□ 1.06
TRPM1-211ENST00000560658 OTUD7AQ8TE49 926 aaPredicted RBP21.66■■□□□ 1.06
TRPM1-211ENST00000560658 ANP32BQ92688 251 aaKnown RBP21.66■■□□□ 1.06
TRPM1-211ENST00000560658 SLC26A8Q96RN1 970 aa21.66■■□□□ 1.06
TRPM1-211ENST00000560658 SMARCA5O60264 1052 aaPredicted RBP21.65■■□□□ 1.06
TRPM1-211ENST00000560658 RAB11FIP3O75154 756 aa21.65■■□□□ 1.06
TRPM1-211ENST00000560658 HOXC9P31274 260 aa21.65■■□□□ 1.06
TRPM1-211ENST00000560658 G2E3Q7L622 706 aa21.65■■□□□ 1.06
TRPM1-211ENST00000560658 RRAGDQ9NQL2 400 aaPredicted RBP21.65■■□□□ 1.06
TRPM1-211ENST00000560658 ZNF445P59923 1031 aa21.64■■□□□ 1.05
TRPM1-211ENST00000560658 DDX49Q9Y6V7 483 aaKnown RBP21.64■■□□□ 1.05
TRPM1-211ENST00000560658 NWD1Q149M9 1564 aa21.63■■□□□ 1.05
TRPM1-211ENST00000560658 FOXO3O43524 673 aa21.63■■□□□ 1.05
TRPM1-211ENST00000560658 MX1P20591 662 aa21.63■■□□□ 1.05
TRPM1-211ENST00000560658 NLRP6P59044 892 aa21.63■■□□□ 1.05
TRPM1-211ENST00000560658 CCDC173Q0VFZ6 552 aa21.63■■□□□ 1.05
TRPM1-211ENST00000560658 FKBP5Q13451 457 aaPredicted RBP21.63■■□□□ 1.05
TRPM1-211ENST00000560658 NUTM2FA1L443 756 aa21.62■■□□□ 1.05
TRPM1-211ENST00000560658 TRIM44Q96DX7 344 aaPredicted RBP21.62■■□□□ 1.05
TRPM1-211ENST00000560658 PANK2Q9BZ23 570 aa21.62■■□□□ 1.05
TRPM1-211ENST00000560658 FOXD4L1Q9NU39 408 aa21.62■■□□□ 1.05
TRPM1-211ENST00000560658 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
TRPM1-211ENST00000560658 INTS4Q96HW7 963 aaKnown RBP21.62■■□□□ 1.05
TRPM1-211ENST00000560658 ESYT1Q9BSJ8 1104 aa21.62■■□□□ 1.05
TRPM1-211ENST00000560658 F6X3S4 739 aa21.61■■□□□ 1.05
TRPM1-211ENST00000560658 ANO8Q9HCE9 1232 aaPredicted RBP21.61■■□□□ 1.05
TRPM1-211ENST00000560658 MIS18AQ9NYP9 233 aa21.61■■□□□ 1.05
TRPM1-211ENST00000560658 PPP1R9BQ96SB3 815 aa21.59■■□□□ 1.05
TRPM1-211ENST00000560658 TUBGCP6Q96RT7 1819 aa21.59■■□□□ 1.05
TRPM1-211ENST00000560658 CUL4AQ13619 759 aa21.58■■□□□ 1.05
TRPM1-211ENST00000560658 MARF1Q9Y4F3 1742 aaKnown RBP21.58■■□□□ 1.05
TRPM1-211ENST00000560658 APBB1O00213 710 aa21.58■■□□□ 1.04
TRPM1-211ENST00000560658 SOX12O15370 315 aa21.58■■□□□ 1.04
TRPM1-211ENST00000560658 UBTFL1P0CB47 393 aaPredicted RBP21.58■■□□□ 1.04
TRPM1-211ENST00000560658 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.04
TRPM1-211ENST00000560658 SSH3Q8TE77 659 aa21.58■■□□□ 1.04
TRPM1-211ENST00000560658 LMBRD1Q9NUN5 540 aa21.58■■□□□ 1.04
TRPM1-211ENST00000560658 HDAC5Q9UQL6 1122 aa21.58■■□□□ 1.04
TRPM1-211ENST00000560658 CEMIPQ8WUJ3 1361 aa21.57■■□□□ 1.04
TRPM1-211ENST00000560658 MED1Q15648 1581 aaPredicted RBP21.57■■□□□ 1.04
TRPM1-211ENST00000560658 ESPNB1AK53 854 aa21.57■■□□□ 1.04
TRPM1-211ENST00000560658 MBD3O95983 291 aa21.56■■□□□ 1.04
TRPM1-211ENST00000560658 CHMLP26374 656 aa21.56■■□□□ 1.04
TRPM1-211ENST00000560658 MCTP1Q6DN14 999 aa21.56■■□□□ 1.04
TRPM1-211ENST00000560658 GAS2L3Q86XJ1 694 aa21.56■■□□□ 1.04
TRPM1-211ENST00000560658 ARXQ96QS3 562 aa21.56■■□□□ 1.04
TRPM1-211ENST00000560658 EXOC6BQ9Y2D4 811 aa21.56■■□□□ 1.04
TRPM1-211ENST00000560658 LMTK3Q96Q04 1460 aa21.55■■□□□ 1.04
TRPM1-211ENST00000560658 NASPP49321 788 aaPredicted RBP21.55■■□□□ 1.04
TRPM1-211ENST00000560658 HS1BP3Q53T59 392 aa21.55■■□□□ 1.04
TRPM1-211ENST00000560658 IL17REQ8NFR9 667 aa21.55■■□□□ 1.04
TRPM1-211ENST00000560658 FER1L4A9Z1Z3 1794 aa21.55■■□□□ 1.04
TRPM1-211ENST00000560658 OVOS2A0A0G2JMS6 1433 aa21.55■■□□□ 1.04
TRPM1-211ENST00000560658 RGPD8O14715 1765 aaPredicted RBP21.54■■□□□ 1.04
TRPM1-211ENST00000560658 PHRF1Q9P1Y6 1649 aaKnown RBP21.54■■□□□ 1.04
TRPM1-211ENST00000560658 POLA2Q14181 598 aa21.54■■□□□ 1.04
TRPM1-211ENST00000560658 HDGFL1Q5TGJ6 251 aa21.54■■□□□ 1.04
TRPM1-211ENST00000560658 IP6K1Q92551 441 aa21.54■■□□□ 1.04
TRPM1-211ENST00000560658 NEK4P51957 841 aa21.53■■□□□ 1.04
TRPM1-211ENST00000560658 KLHL34Q8N239 644 aa21.53■■□□□ 1.04
TRPM1-211ENST00000560658 ABTB2Q8N961 1025 aa21.53■■□□□ 1.04
TRPM1-211ENST00000560658 KCNH5Q8NCM2 988 aa21.53■■□□□ 1.04
TRPM1-211ENST00000560658 USP44Q9H0E7 712 aa21.53■■□□□ 1.04
TRPM1-211ENST00000560658 LRRFIP2Q9Y608 721 aaKnown RBP21.53■■□□□ 1.04
TRPM1-211ENST00000560658 NCAPD2Q15021 1401 aa21.52■■□□□ 1.04
TRPM1-211ENST00000560658 TMX3Q96JJ7 454 aa21.52■■□□□ 1.04
TRPM1-211ENST00000560658 PNMA6EA0A0J9YXQ4 647 aa21.51■■□□□ 1.03
TRPM1-211ENST00000560658 KIF1BPQ96EK5 621 aa21.51■■□□□ 1.03
TRPM1-211ENST00000560658 TRIM6-TRIM34B2RNG4 842 aa21.51■■□□□ 1.03
TRPM1-211ENST00000560658 CEBPAP49715 358 aaPredicted RBP21.5■■□□□ 1.03
TRPM1-211ENST00000560658 USP42Q9H9J4 1324 aaKnown RBP21.5■■□□□ 1.03
TRPM1-211ENST00000560658 BRD1O95696 1058 aa21.49■■□□□ 1.03
TRPM1-211ENST00000560658 ZSCAN23Q3MJ62 389 aa21.49■■□□□ 1.03
TRPM1-211ENST00000560658 PHF8Q9UPP1 1060 aa21.49■■□□□ 1.03
TRPM1-211ENST00000560658 NFAT5O94916 1531 aa21.48■■□□□ 1.03
TRPM1-211ENST00000560658 AMOTQ4VCS5 1084 aa21.48■■□□□ 1.03
TRPM1-211ENST00000560658 RILPL2Q969X0 211 aa21.48■■□□□ 1.03
TRPM1-211ENST00000560658 ANO2Q9NQ90 1003 aa21.48■■□□□ 1.03
TRPM1-211ENST00000560658 KCNA6P17658 529 aa21.47■■□□□ 1.03
TRPM1-211ENST00000560658 EIF4A1P60842 406 aaKnown RBP21.47■■□□□ 1.03
TRPM1-211ENST00000560658 ZGPATQ8N5A5 531 aaKnown RBP21.47■■□□□ 1.03
TRPM1-211ENST00000560658 SYAP1Q96A49 352 aaPredicted RBP21.47■■□□□ 1.03
TRPM1-211ENST00000560658 ZDHHC9Q9Y397 364 aa21.47■■□□□ 1.03
TRPM1-211ENST00000560658 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
TRPM1-211ENST00000560658 TTC41PQ6P2S7 1318 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms