RNA–Protein interactions for RNA: ENST00000560511.5

CHRNB4-205, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 3

Gene CHRNB4, Length 727 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-205ENST00000560511 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
CHRNB4-205ENST00000560511 RAPGEF4Q8WZA2 1011 aa11.58□□□□□ -0.56
CHRNB4-205ENST00000560511 AK7Q96M32 723 aa11.58□□□□□ -0.56
CHRNB4-205ENST00000560511 MEGF6O75095 1541 aa11.58□□□□□ -0.56
CHRNB4-205ENST00000560511 ADCY9O60503 1353 aa11.57□□□□□ -0.56
CHRNB4-205ENST00000560511 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
CHRNB4-205ENST00000560511 SMIM5Q71RC9 77 aa11.57□□□□□ -0.56
CHRNB4-205ENST00000560511 POLKQ9UBT6 870 aa11.57□□□□□ -0.56
CHRNB4-205ENST00000560511 SSUH2Q9Y2M2 353 aa11.57□□□□□ -0.56
CHRNB4-205ENST00000560511 APLP1P51693 650 aa11.56□□□□□ -0.56
CHRNB4-205ENST00000560511 KNSTRNQ9Y448 316 aa11.56□□□□□ -0.56
CHRNB4-205ENST00000560511 WASHC2AQ641Q2 1341 aa11.56□□□□□ -0.56
CHRNB4-205ENST00000560511 PALLDQ8WX93 1383 aa11.55□□□□□ -0.56
CHRNB4-205ENST00000560511 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
CHRNB4-205ENST00000560511 KIF3CO14782 793 aa11.55□□□□□ -0.56
CHRNB4-205ENST00000560511 MORC1Q86VD1 984 aa11.55□□□□□ -0.56
CHRNB4-205ENST00000560511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.54□□□□□ -0.56
CHRNB4-205ENST00000560511 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
CHRNB4-205ENST00000560511 C5P01031 1676 aa11.54□□□□□ -0.56
CHRNB4-205ENST00000560511 ANKRD26Q9UPS8 1709 aa11.54□□□□□ -0.56
CHRNB4-205ENST00000560511 SPDYE4A6NLX3 237 aa11.53□□□□□ -0.56
CHRNB4-205ENST00000560511 PCDH11XQ9BZA7 1347 aa11.53□□□□□ -0.56
CHRNB4-205ENST00000560511 PCDH11YQ9BZA8 1340 aa11.53□□□□□ -0.56
CHRNB4-205ENST00000560511 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.57
CHRNB4-205ENST00000560511 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
CHRNB4-205ENST00000560511 AMIGO3Q86WK7 504 aa11.52□□□□□ -0.57
CHRNB4-205ENST00000560511 EYA1Q99502 592 aa11.52□□□□□ -0.57
CHRNB4-205ENST00000560511 TOMM70O94826 608 aa11.51□□□□□ -0.57
CHRNB4-205ENST00000560511 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
CHRNB4-205ENST00000560511 BCS1LQ9Y276 419 aa11.51□□□□□ -0.57
CHRNB4-205ENST00000560511 NCAPD2Q15021 1401 aa11.51□□□□□ -0.57
CHRNB4-205ENST00000560511 SSFA2P28290 1259 aa11.5□□□□□ -0.57
CHRNB4-205ENST00000560511 C16orf71Q8IYS4 520 aaPredicted RBP11.5□□□□□ -0.57
CHRNB4-205ENST00000560511 DNAJC5GQ8N7S2 189 aa11.5□□□□□ -0.57
CHRNB4-205ENST00000560511 C4BP0C0L5 1744 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 MAP2P11137 1827 aaKnown RBP11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 TAF1LQ8IZX4 1826 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 A0A0G2JLW4 131 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 GNPATO15228 680 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 CYP27B1O15528 508 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 MMP10P09238 476 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 CNGB1Q14028 1251 aaPredicted RBP11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 CC2D1BQ5T0F9 858 aaKnown RBP11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 PIGBQ92521 554 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 NMRK2Q9NPI5 230 aa11.49□□□□□ -0.57
CHRNB4-205ENST00000560511 LOC102724428A0A0B4J2F2 783 aa11.48□□□□□ -0.57
CHRNB4-205ENST00000560511 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
CHRNB4-205ENST00000560511 SIK1P57059 783 aa11.48□□□□□ -0.57
CHRNB4-205ENST00000560511 HTRA3P83110 453 aa11.48□□□□□ -0.57
CHRNB4-205ENST00000560511 LINC00116Q8NCU8 138 aa11.48□□□□□ -0.57
CHRNB4-205ENST00000560511 FCHSD2O94868 740 aa11.47□□□□□ -0.57
CHRNB4-205ENST00000560511 ATP6V1AP38606 617 aa11.47□□□□□ -0.57
CHRNB4-205ENST00000560511 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
CHRNB4-205ENST00000560511 TMOD3Q9NYL9 352 aa11.47□□□□□ -0.57
CHRNB4-205ENST00000560511 SPG7Q9UQ90 795 aa11.47□□□□□ -0.57
CHRNB4-205ENST00000560511 COL13A1Q5TAT6 717 aaPredicted RBP11.46□□□□□ -0.57
CHRNB4-205ENST00000560511 ASAP1Q9ULH1 1129 aa11.46□□□□□ -0.57
CHRNB4-205ENST00000560511 UBR3Q6ZT12 1888 aa11.46□□□□□ -0.58
CHRNB4-205ENST00000560511 ITGB4P16144 1822 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 MTHFSP49914 203 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 TGFB2P61812 414 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 ITPK1Q13572 414 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 PKD1L3Q7Z443 1732 aa11.45□□□□□ -0.58
CHRNB4-205ENST00000560511 TOGARAM1Q9Y4F4 1720 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 DPEP1P16444 411 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 IL13P35225 146 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 C9orf131Q5VYM1 1079 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 TNS4Q8IZW8 715 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 KLRG1Q96E93 195 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 RTCBQ9Y3I0 505 aaKnown RBP11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 PXDNLA1KZ92 1463 aa11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 N4BP2Q86UW6 1770 aaPredicted RBP11.44□□□□□ -0.58
CHRNB4-205ENST00000560511 NPC1L1Q9UHC9 1359 aa11.43□□□□□ -0.58
CHRNB4-205ENST00000560511 PHKG2P15735 406 aa11.43□□□□□ -0.58
CHRNB4-205ENST00000560511 NKX1-1Q15270 411 aaPredicted RBP11.43□□□□□ -0.58
CHRNB4-205ENST00000560511 SULT6B1Q6IMI4 303 aa11.43□□□□□ -0.58
CHRNB4-205ENST00000560511 IFNL2Q8IZJ0 200 aa11.43□□□□□ -0.58
CHRNB4-205ENST00000560511 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
CHRNB4-205ENST00000560511 PLEKHG2Q9H7P9 1386 aa11.42□□□□□ -0.58
CHRNB4-205ENST00000560511 PLEKHO1Q53GL0 409 aaPredicted RBP11.42□□□□□ -0.58
CHRNB4-205ENST00000560511 RRAGCQ9HB90 399 aa11.42□□□□□ -0.58
CHRNB4-205ENST00000560511 KDM2BQ8NHM5 1336 aa11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 RFC4P35249 363 aa11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 FSTL1Q12841 308 aa11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 ZNF530Q6P9A1 599 aaPredicted RBP11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 ATG3Q9NT62 314 aa11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 RNF181Q9P0P0 153 aa11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 CICQ96RK0 1608 aaPredicted RBP11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 KDRP35968 1356 aa11.41□□□□□ -0.58
CHRNB4-205ENST00000560511 WDR90Q96KV7 1748 aa11.4□□□□□ -0.58
CHRNB4-205ENST00000560511 PCNTO95613 3336 aa11.4□□□□□ -0.58
CHRNB4-205ENST00000560511 DIAPH1O60610 1272 aaKnown RBP11.4□□□□□ -0.58
CHRNB4-205ENST00000560511 HMOX1P09601 288 aa11.4□□□□□ -0.58
CHRNB4-205ENST00000560511 AMOTQ4VCS5 1084 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms