RNA–Protein interactions for RNA: ENST00000560504.1

PIF1-209, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-209ENST00000560504 LOC102724428A0A0B4J2F2 783 aa28.89■■■□□ 2.22
PIF1-209ENST00000560504 SIK1P57059 783 aa28.89■■■□□ 2.22
PIF1-209ENST00000560504 SLC15A2Q16348 729 aa28.89■■■□□ 2.22
PIF1-209ENST00000560504 TEFQ10587 303 aa28.88■■■□□ 2.21
PIF1-209ENST00000560504 NFE2L2Q16236 605 aa28.88■■■□□ 2.21
PIF1-209ENST00000560504 HTATSF1O43719 755 aaKnown RBP28.87■■■□□ 2.21
PIF1-209ENST00000560504 CCDC146Q8IYE0 955 aa28.87■■■□□ 2.21
PIF1-209ENST00000560504 HMGB2P26583 209 aaKnown RBP28.86■■■□□ 2.21
PIF1-209ENST00000560504 RBM42Q9BTD8 480 aaKnown RBP28.86■■■□□ 2.21
PIF1-209ENST00000560504 ZNF827Q17R98 1081 aa28.85■■■□□ 2.21
PIF1-209ENST00000560504 MCM10Q7L590 875 aa28.85■■■□□ 2.21
PIF1-209ENST00000560504 AKT1S1Q96B36 256 aa28.85■■■□□ 2.21
PIF1-209ENST00000560504 MRS2Q9HD23 443 aa28.85■■■□□ 2.21
PIF1-209ENST00000560504 ATP6V1AP38606 617 aa28.84■■■□□ 2.21
PIF1-209ENST00000560504 DCTN1Q14203 1278 aa28.84■■■□□ 2.21
PIF1-209ENST00000560504 RUNDC1Q96C34 613 aa28.84■■■□□ 2.21
PIF1-209ENST00000560504 CEMIPQ8WUJ3 1361 aa28.84■■■□□ 2.21
PIF1-209ENST00000560504 PTCD1O75127 700 aaKnown RBP28.83■■■□□ 2.21
PIF1-209ENST00000560504 MRC1P22897 1456 aa28.83■■■□□ 2.21
PIF1-209ENST00000560504 SLC39A6Q13433 755 aa28.82■■■□□ 2.2
PIF1-209ENST00000560504 LY75O60449 1722 aa28.82■■■□□ 2.2
PIF1-209ENST00000560504 SCN11AQ9UI33 1791 aa28.81■■■□□ 2.2
PIF1-209ENST00000560504 ADAMTS7Q9UKP4 1686 aa28.8■■■□□ 2.2
PIF1-209ENST00000560504 ITPK1Q13572 414 aa28.8■■■□□ 2.2
PIF1-209ENST00000560504 SLC4A9Q96Q91 983 aa28.8■■■□□ 2.2
PIF1-209ENST00000560504 TFCP2L1Q9NZI6 479 aa28.8■■■□□ 2.2
PIF1-209ENST00000560504 TMPOP42166 694 aaKnown RBP28.79■■■□□ 2.2
PIF1-209ENST00000560504 RIPK4P57078 832 aa28.79■■■□□ 2.2
PIF1-209ENST00000560504 PNISRQ8TF01 805 aaKnown RBP28.78■■■□□ 2.2
PIF1-209ENST00000560504 PAPPAQ13219 1627 aa28.78■■■□□ 2.2
PIF1-209ENST00000560504 LINC00116Q8NCU8 138 aa28.77■■■□□ 2.2
PIF1-209ENST00000560504 BTBD11A6QL63 1104 aa28.76■■■□□ 2.19
PIF1-209ENST00000560504 TTC5Q8N0Z6 440 aa28.76■■■□□ 2.19
PIF1-209ENST00000560504 RRP7AQ9Y3A4 280 aaKnown RBP28.76■■■□□ 2.19
PIF1-209ENST00000560504 NEUROD2Q15784 382 aa28.75■■■□□ 2.19
PIF1-209ENST00000560504 PDGFDQ9GZP0 370 aaPredicted RBP28.75■■■□□ 2.19
PIF1-209ENST00000560504 ZNF790Q6PG37 636 aa28.74■■■□□ 2.19
PIF1-209ENST00000560504 AK7Q96M32 723 aa28.74■■■□□ 2.19
PIF1-209ENST00000560504 LMOD3Q0VAK6 560 aa28.73■■■□□ 2.19
PIF1-209ENST00000560504 THUMPD2Q9BTF0 503 aaKnown RBP28.73■■■□□ 2.19
PIF1-209ENST00000560504 TAF7Q15545 349 aaPredicted RBP28.72■■■□□ 2.19
PIF1-209ENST00000560504 PNPLA7Q6ZV29 1317 aa28.7■■■□□ 2.19
PIF1-209ENST00000560504 SRCAPQ6ZRS2 3230 aa28.69■■■□□ 2.18
PIF1-209ENST00000560504 APAF1O14727 1248 aa28.69■■■□□ 2.18
PIF1-209ENST00000560504 KCNQ3O43525 872 aa28.69■■■□□ 2.18
PIF1-209ENST00000560504 ZNF496Q96IT1 587 aaPredicted RBP28.69■■■□□ 2.18
PIF1-209ENST00000560504 DNAJC10Q8IXB1 793 aa28.68■■■□□ 2.18
PIF1-209ENST00000560504 VSIG10Q8N0Z9 540 aa28.68■■■□□ 2.18
PIF1-209ENST00000560504 GNPATO15228 680 aa28.67■■■□□ 2.18
PIF1-209ENST00000560504 ZBTB7AO95365 584 aa28.67■■■□□ 2.18
PIF1-209ENST00000560504 RC3H1Q5TC82 1133 aaKnown RBP28.67■■■□□ 2.18
PIF1-209ENST00000560504 MIS18AQ9NYP9 233 aa28.67■■■□□ 2.18
PIF1-209ENST00000560504 KCPQ6ZWJ8 1503 aa28.66■■■□□ 2.18
PIF1-209ENST00000560504 MSH5O43196 834 aa28.66■■■□□ 2.18
PIF1-209ENST00000560504 DIEXFQ68CQ4 756 aaKnown RBP28.66■■■□□ 2.18
PIF1-209ENST00000560504 COL23A1Q86Y22 540 aaPredicted RBP28.66■■■□□ 2.18
PIF1-209ENST00000560504 FLAD1Q8NFF5 587 aa28.66■■■□□ 2.18
PIF1-209ENST00000560504 FMNL2Q96PY5 1086 aa28.66■■■□□ 2.18
PIF1-209ENST00000560504 TRIM35Q9UPQ4 493 aa28.66■■■□□ 2.18
PIF1-209ENST00000560504 C5P01031 1676 aa28.66■■■□□ 2.18
PIF1-209ENST00000560504 PHF14O94880 888 aa28.65■■■□□ 2.18
PIF1-209ENST00000560504 AMIGO3Q86WK7 504 aa28.65■■■□□ 2.18
PIF1-209ENST00000560504 SPON1Q9HCB6 807 aa28.65■■■□□ 2.18
PIF1-209ENST00000560504 CNTNAP4Q9C0A0 1308 aa28.65■■■□□ 2.18
PIF1-209ENST00000560504 C4BP0C0L5 1744 aa28.64■■■□□ 2.18
PIF1-209ENST00000560504 CRKLP46109 303 aaKnown RBP28.64■■■□□ 2.18
PIF1-209ENST00000560504 SMIM5Q71RC9 77 aa28.64■■■□□ 2.18
PIF1-209ENST00000560504 HEG1Q9ULI3 1381 aa28.63■■■□□ 2.17
PIF1-209ENST00000560504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.63■■■□□ 2.17
PIF1-209ENST00000560504 SSFA2P28290 1259 aa28.63■■■□□ 2.17
PIF1-209ENST00000560504 FAM9BQ8IZU0 186 aa28.63■■■□□ 2.17
PIF1-209ENST00000560504 SLC16A10Q8TF71 515 aa28.63■■■□□ 2.17
PIF1-209ENST00000560504 ATF5Q9Y2D1 282 aaPredicted RBP28.63■■■□□ 2.17
PIF1-209ENST00000560504 CYP19A1P11511 503 aaPredicted RBP28.62■■■□□ 2.17
PIF1-209ENST00000560504 MTFR1LQ9H019 292 aa28.62■■■□□ 2.17
PIF1-209ENST00000560504 RTCBQ9Y3I0 505 aaKnown RBP28.62■■■□□ 2.17
PIF1-209ENST00000560504 VIRMAQ69YN4 1812 aaKnown RBP28.62■■■□□ 2.17
PIF1-209ENST00000560504 ZNF831Q5JPB2 1677 aa28.61■■■□□ 2.17
PIF1-209ENST00000560504 TEX13AQ9BXU3 409 aaPredicted RBP28.61■■■□□ 2.17
PIF1-209ENST00000560504 SIPA1L3O60292 1781 aaPredicted RBP28.6■■■□□ 2.17
PIF1-209ENST00000560504 TAF1LQ8IZX4 1826 aa28.6■■■□□ 2.17
PIF1-209ENST00000560504 RPS6KA4O75676 772 aa28.6■■■□□ 2.17
PIF1-209ENST00000560504 INTS5Q6P9B9 1019 aaKnown RBP28.6■■■□□ 2.17
PIF1-209ENST00000560504 STARD3NLO95772 234 aa28.59■■■□□ 2.17
PIF1-209ENST00000560504 CCDC87Q9NVE4 849 aa28.59■■■□□ 2.17
PIF1-209ENST00000560504 DLG5Q8TDM6 1919 aa28.59■■■□□ 2.17
PIF1-209ENST00000560504 CASZ1Q86V15 1759 aa28.58■■■□□ 2.17
PIF1-209ENST00000560504 TRAPPC3LQ5T215 181 aa28.58■■■□□ 2.17
PIF1-209ENST00000560504 TSPYL4Q9UJ04 414 aa28.57■■■□□ 2.16
PIF1-209ENST00000560504 SENP3-EIF4A1A0A087X0R7 540 aa28.56■■■□□ 2.16
PIF1-209ENST00000560504 CCER2I3L3R5 266 aa28.56■■■□□ 2.16
PIF1-209ENST00000560504 SNRPA1P09661 255 aaKnown RBP28.56■■■□□ 2.16
PIF1-209ENST00000560504 BABAM1Q9NWV8 329 aa28.56■■■□□ 2.16
PIF1-209ENST00000560504 ADRA2BP18089 450 aa28.55■■■□□ 2.16
PIF1-209ENST00000560504 EIF4A1P60842 406 aaKnown RBP28.54■■■□□ 2.16
PIF1-209ENST00000560504 ARHGEF1Q92888 912 aaKnown RBP28.54■■■□□ 2.16
PIF1-209ENST00000560504 LAS1LQ9Y4W2 734 aaKnown RBP28.54■■■□□ 2.16
PIF1-209ENST00000560504 UBR2Q8IWV8 1755 aa28.53■■■□□ 2.16
PIF1-209ENST00000560504 TJP1Q07157 1748 aa28.53■■■□□ 2.16
PIF1-209ENST00000560504 PRAMEF22A3QJZ6 481 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms