RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 GSE1Q14687 1217 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 TSKSQ9UJT2 592 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 USP54Q70EL1 1684 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 ERBB3P21860 1342 aa9.8□□□□□ -0.84
HERC1-208ENST00000560462 ITSN1Q15811 1721 aa9.79□□□□□ -0.84
HERC1-208ENST00000560462 HMGB2P26583 209 aaKnown RBP9.79□□□□□ -0.84
HERC1-208ENST00000560462 POLR3AO14802 1390 aaPredicted RBP9.78□□□□□ -0.84
HERC1-208ENST00000560462 KAT6BQ8WYB5 2073 aa9.78□□□□□ -0.84
HERC1-208ENST00000560462 MMP10P09238 476 aa9.78□□□□□ -0.84
HERC1-208ENST00000560462 PRIM1P49642 420 aaKnown RBP9.78□□□□□ -0.84
HERC1-208ENST00000560462 ACEP12821 1306 aa9.78□□□□□ -0.84
HERC1-208ENST00000560462 KIF13BQ9NQT8 1826 aa9.77□□□□□ -0.84
HERC1-208ENST00000560462 PHF14O94880 888 aa9.77□□□□□ -0.85
HERC1-208ENST00000560462 POTEIP0CG38 1075 aa9.77□□□□□ -0.85
HERC1-208ENST00000560462 POTEJP0CG39 1038 aa9.77□□□□□ -0.85
HERC1-208ENST00000560462 IL2RBP14784 551 aa9.77□□□□□ -0.85
HERC1-208ENST00000560462 DALRD3Q5D0E6 543 aaKnown RBP9.77□□□□□ -0.85
HERC1-208ENST00000560462 NUDT16Q96DE0 195 aaKnown RBP9.77□□□□□ -0.85
HERC1-208ENST00000560462 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
HERC1-208ENST00000560462 ROCK1Q13464 1354 aa9.76□□□□□ -0.85
HERC1-208ENST00000560462 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
HERC1-208ENST00000560462 KDM6AO15550 1401 aaPredicted RBP9.76□□□□□ -0.85
HERC1-208ENST00000560462 CPSF1Q10570 1443 aaKnown RBP9.76□□□□□ -0.85
HERC1-208ENST00000560462 MPNDQ8N594 471 aa9.76□□□□□ -0.85
HERC1-208ENST00000560462 AK7Q96M32 723 aa9.76□□□□□ -0.85
HERC1-208ENST00000560462 ARFGEF1Q9Y6D6 1849 aa9.76□□□□□ -0.85
HERC1-208ENST00000560462 NSD2O96028 1365 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 USP47Q96K76 1375 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 NSD3Q9BZ95 1437 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 C5P01031 1676 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.75□□□□□ -0.85
HERC1-208ENST00000560462 LMNB1P20700 586 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 KCNA3P22001 575 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 DPY19L2Q6NUT2 758 aa9.75□□□□□ -0.85
HERC1-208ENST00000560462 DDX54Q8TDD1 881 aaKnown RBP9.75□□□□□ -0.85
HERC1-208ENST00000560462 RNF25Q96BH1 459 aaPredicted RBP9.75□□□□□ -0.85
HERC1-208ENST00000560462 C14orf93Q9H972 538 aaKnown RBP9.75□□□□□ -0.85
HERC1-208ENST00000560462 ADAMTS7Q9UKP4 1686 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 CA12O43570 354 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 NLRP6P59044 892 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 RASSF7Q02833 373 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 RGL3Q3MIN7 710 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 AMIGO3Q86WK7 504 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 ABT1Q9ULW3 272 aaKnown RBP9.74□□□□□ -0.85
HERC1-208ENST00000560462 SBF1O95248 1867 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 BRCA1P38398 1863 aaKnown RBP9.74□□□□□ -0.85
HERC1-208ENST00000560462 THSD7BQ9C0I4 1608 aa9.74□□□□□ -0.85
HERC1-208ENST00000560462 LTBP1Q14766 1721 aa9.73□□□□□ -0.85
HERC1-208ENST00000560462 SLIT3O75094 1523 aa9.73□□□□□ -0.85
HERC1-208ENST00000560462 GPR101Q96P66 508 aaPredicted RBP9.73□□□□□ -0.85
HERC1-208ENST00000560462 ITGBL1O95965 494 aaPredicted RBP9.72□□□□□ -0.85
HERC1-208ENST00000560462 SSFA2P28290 1259 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 ECE1P42892 770 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 MNX1P50219 401 aaPredicted RBP9.72□□□□□ -0.85
HERC1-208ENST00000560462 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 ARHGEF25Q86VW2 580 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 LDHDQ86WU2 507 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 CAPNS2Q96L46 248 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 SZT2Q5T011 3432 aa9.72□□□□□ -0.85
HERC1-208ENST00000560462 RIOK3O14730 519 aaKnown RBP9.71□□□□□ -0.86
HERC1-208ENST00000560462 GRM1Q13255 1194 aa9.71□□□□□ -0.86
HERC1-208ENST00000560462 NLRP2Q9NX02 1062 aa9.71□□□□□ -0.86
HERC1-208ENST00000560462 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
HERC1-208ENST00000560462 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
HERC1-208ENST00000560462 GTPBP6O43824 516 aaPredicted RBP9.7□□□□□ -0.86
HERC1-208ENST00000560462 NKX1-1Q15270 411 aaPredicted RBP9.7□□□□□ -0.86
HERC1-208ENST00000560462 COL6A3P12111 3177 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 C4BP0C0L5 1744 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 TIAM2Q8IVF5 1701 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 DOT1LQ8TEK3 1739 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 RBM42Q9BTD8 480 aaKnown RBP9.69□□□□□ -0.86
HERC1-208ENST00000560462 CASP8AP2Q9UKL3 1982 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 TRAK1Q9UPV9 953 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 CCDC61Q9Y6R9 512 aa9.69□□□□□ -0.86
HERC1-208ENST00000560462 RGPD5Q99666 1765 aa9.68□□□□□ -0.86
HERC1-208ENST00000560462 MAP2K2P36507 400 aa9.68□□□□□ -0.86
HERC1-208ENST00000560462 NUBP1P53384 320 aa9.68□□□□□ -0.86
HERC1-208ENST00000560462 CYP4F22Q6NT55 531 aa9.68□□□□□ -0.86
HERC1-208ENST00000560462 NLGN1Q8N2Q7 840 aa9.67□□□□□ -0.86
HERC1-208ENST00000560462 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
HERC1-208ENST00000560462 MEGF6O75095 1541 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 UBR3Q6ZT12 1888 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 PALLDQ8WX93 1383 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 IQCA1LA6NCM1 817 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 SOX12O15370 315 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 TAF1LQ8IZX4 1826 aa9.66□□□□□ -0.86
HERC1-208ENST00000560462 AOC2O75106 756 aa9.65□□□□□ -0.86
HERC1-208ENST00000560462 TMF1P82094 1093 aa9.65□□□□□ -0.86
HERC1-208ENST00000560462 CDK19Q9BWU1 502 aa9.65□□□□□ -0.86
HERC1-208ENST00000560462 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
HERC1-208ENST00000560462 CHRNA5P30532 468 aa9.64□□□□□ -0.87
HERC1-208ENST00000560462 EAPPQ56P03 285 aaPredicted RBP9.64□□□□□ -0.87
HERC1-208ENST00000560462 CLEC11AQ9Y240 323 aa9.64□□□□□ -0.87
HERC1-208ENST00000560462 GTF3C3Q9Y5Q9 886 aa9.64□□□□□ -0.87
HERC1-208ENST00000560462 C4AP0C0L4 1744 aa9.63□□□□□ -0.87
HERC1-208ENST00000560462 DDNO94850 711 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms