RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
SNRPA1-210ENST00000560383 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
SNRPA1-210ENST00000560383 SSFA2P28290 1259 aa20.48■□□□□ 0.87
SNRPA1-210ENST00000560383 DCAF5Q96JK2 942 aa20.48■□□□□ 0.87
SNRPA1-210ENST00000560383 ASAP1Q9ULH1 1129 aa20.48■□□□□ 0.87
SNRPA1-210ENST00000560383 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-210ENST00000560383 KDM6AO15550 1401 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-210ENST00000560383 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
SNRPA1-210ENST00000560383 KLHL34Q8N239 644 aa20.46■□□□□ 0.87
SNRPA1-210ENST00000560383 ATG3Q9NT62 314 aa20.46■□□□□ 0.87
SNRPA1-210ENST00000560383 CICQ96RK0 1608 aaPredicted RBP20.45■□□□□ 0.87
SNRPA1-210ENST00000560383 SCN11AQ9UI33 1791 aa20.45■□□□□ 0.86
SNRPA1-210ENST00000560383 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
SNRPA1-210ENST00000560383 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
SNRPA1-210ENST00000560383 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.44■□□□□ 0.86
SNRPA1-210ENST00000560383 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
SNRPA1-210ENST00000560383 GPR162Q16538 588 aa20.44■□□□□ 0.86
SNRPA1-210ENST00000560383 MSL1Q68DK7 614 aa20.44■□□□□ 0.86
SNRPA1-210ENST00000560383 ZNF530Q6P9A1 599 aaPredicted RBP20.44■□□□□ 0.86
SNRPA1-210ENST00000560383 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
SNRPA1-210ENST00000560383 ATP6V1AP38606 617 aa20.43■□□□□ 0.86
SNRPA1-210ENST00000560383 ITPK1Q13572 414 aa20.43■□□□□ 0.86
SNRPA1-210ENST00000560383 AMIGO3Q86WK7 504 aa20.43■□□□□ 0.86
SNRPA1-210ENST00000560383 HMOX1P09601 288 aa20.42■□□□□ 0.86
SNRPA1-210ENST00000560383 CD2APQ9Y5K6 639 aa20.42■□□□□ 0.86
SNRPA1-210ENST00000560383 C1orf141Q5JVX7 400 aa20.41■□□□□ 0.86
SNRPA1-210ENST00000560383 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
SNRPA1-210ENST00000560383 GNPATO15228 680 aa20.4■□□□□ 0.86
SNRPA1-210ENST00000560383 PHF14O94880 888 aa20.4■□□□□ 0.86
SNRPA1-210ENST00000560383 ZNF784Q8NCA9 323 aaPredicted RBP20.4■□□□□ 0.86
SNRPA1-210ENST00000560383 VIRMAQ69YN4 1812 aaKnown RBP20.39■□□□□ 0.86
SNRPA1-210ENST00000560383 MRC1P22897 1456 aa20.38■□□□□ 0.85
SNRPA1-210ENST00000560383 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
SNRPA1-210ENST00000560383 CABP4P57796 275 aa20.38■□□□□ 0.85
SNRPA1-210ENST00000560383 AKAP4Q5JQC9 854 aa20.38■□□□□ 0.85
SNRPA1-210ENST00000560383 ADAMTS7Q9UKP4 1686 aa20.38■□□□□ 0.85
SNRPA1-210ENST00000560383 C4AP0C0L4 1744 aa20.37■□□□□ 0.85
SNRPA1-210ENST00000560383 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-210ENST00000560383 GRIN3BO60391 1043 aa20.37■□□□□ 0.85
SNRPA1-210ENST00000560383 RC3H1Q5TC82 1133 aaKnown RBP20.37■□□□□ 0.85
SNRPA1-210ENST00000560383 SLC4A9Q96Q91 983 aa20.37■□□□□ 0.85
SNRPA1-210ENST00000560383 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
SNRPA1-210ENST00000560383 TJP1Q07157 1748 aa20.36■□□□□ 0.85
SNRPA1-210ENST00000560383 DDX10Q13206 875 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-210ENST00000560383 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-210ENST00000560383 PELP1Q8IZL8 1130 aaKnown RBP20.36■□□□□ 0.85
SNRPA1-210ENST00000560383 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
SNRPA1-210ENST00000560383 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
SNRPA1-210ENST00000560383 NUDCQ9Y266 331 aa20.35■□□□□ 0.85
SNRPA1-210ENST00000560383 RTCBQ9Y3I0 505 aaKnown RBP20.35■□□□□ 0.85
SNRPA1-210ENST00000560383 YBX3P16989 372 aaKnown RBP eCLIP20.34■□□□□ 0.85
SNRPA1-210ENST00000560383 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
SNRPA1-210ENST00000560383 RSPH6AQ9H0K4 717 aa20.33■□□□□ 0.85
SNRPA1-210ENST00000560383 RALBP1Q15311 655 aa20.32■□□□□ 0.84
SNRPA1-210ENST00000560383 NFATC2IPQ8NCF5 419 aa20.32■□□□□ 0.84
SNRPA1-210ENST00000560383 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
SNRPA1-210ENST00000560383 TRAPPC3LQ5T215 181 aa20.31■□□□□ 0.84
SNRPA1-210ENST00000560383 LGR6Q9HBX8 967 aa20.31■□□□□ 0.84
SNRPA1-210ENST00000560383 KIAA1551Q9HCM1 1747 aa20.3■□□□□ 0.84
SNRPA1-210ENST00000560383 RNMTO43148 476 aaKnown RBP20.3■□□□□ 0.84
SNRPA1-210ENST00000560383 FCHSD2O94868 740 aa20.3■□□□□ 0.84
SNRPA1-210ENST00000560383 GAS2L2Q8NHY3 880 aa20.3■□□□□ 0.84
SNRPA1-210ENST00000560383 PRKAR2BP31323 418 aa20.29■□□□□ 0.84
SNRPA1-210ENST00000560383 NLGN1Q8N2Q7 840 aa20.29■□□□□ 0.84
SNRPA1-210ENST00000560383 SLC52A2Q9HAB3 445 aa20.29■□□□□ 0.84
SNRPA1-210ENST00000560383 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
SNRPA1-210ENST00000560383 PTCD1O75127 700 aaKnown RBP20.28■□□□□ 0.84
SNRPA1-210ENST00000560383 MMP10P09238 476 aa20.28■□□□□ 0.84
SNRPA1-210ENST00000560383 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
SNRPA1-210ENST00000560383 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
SNRPA1-210ENST00000560383 ARHGEF1Q92888 912 aaKnown RBP20.28■□□□□ 0.84
SNRPA1-210ENST00000560383 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
SNRPA1-210ENST00000560383 C10orf71Q711Q0 1435 aa20.27■□□□□ 0.84
SNRPA1-210ENST00000560383 CRKLP46109 303 aaKnown RBP20.27■□□□□ 0.84
SNRPA1-210ENST00000560383 KCPQ6ZWJ8 1503 aa20.27■□□□□ 0.83
SNRPA1-210ENST00000560383 RFC4P35249 363 aa20.26■□□□□ 0.83
SNRPA1-210ENST00000560383 PXDNLA1KZ92 1463 aa20.25■□□□□ 0.83
SNRPA1-210ENST00000560383 GNAT3A8MTJ3 354 aa20.25■□□□□ 0.83
SNRPA1-210ENST00000560383 GYS1P13807 737 aa20.25■□□□□ 0.83
SNRPA1-210ENST00000560383 IL17REQ8NFR9 667 aa20.24■□□□□ 0.83
SNRPA1-210ENST00000560383 BRCA1P38398 1863 aaKnown RBP20.24■□□□□ 0.83
SNRPA1-210ENST00000560383 SIPA1L3O60292 1781 aaPredicted RBP20.23■□□□□ 0.83
SNRPA1-210ENST00000560383 N4BP2Q86UW6 1770 aaPredicted RBP20.23■□□□□ 0.83
SNRPA1-210ENST00000560383 ADCY9O60503 1353 aa20.22■□□□□ 0.83
SNRPA1-210ENST00000560383 CEMIPQ8WUJ3 1361 aa20.22■□□□□ 0.83
SNRPA1-210ENST00000560383 TGFB2P61812 414 aa20.22■□□□□ 0.83
SNRPA1-210ENST00000560383 MYBBP1AQ9BQG0 1328 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-210ENST00000560383 USP42Q9H9J4 1324 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-210ENST00000560383 CCDC87Q9NVE4 849 aa20.21■□□□□ 0.83
SNRPA1-210ENST00000560383 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-210ENST00000560383 VSIG10Q8N0Z9 540 aa20.2■□□□□ 0.82
SNRPA1-210ENST00000560383 C1QTNF8P60827 252 aa20.19■□□□□ 0.82
SNRPA1-210ENST00000560383 PLEKHF1Q96S99 279 aa20.19■□□□□ 0.82
SNRPA1-210ENST00000560383 PARP3Q9Y6F1 533 aa20.19■□□□□ 0.82
SNRPA1-210ENST00000560383 ATP10DQ9P241 1426 aa20.19■□□□□ 0.82
SNRPA1-210ENST00000560383 HTATSF1O43719 755 aaKnown RBP20.18■□□□□ 0.82
SNRPA1-210ENST00000560383 GIGYF1O75420 1035 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-210ENST00000560383 CYP19A1P11511 503 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-210ENST00000560383 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
SNRPA1-210ENST00000560383 DNAJC10Q8IXB1 793 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms