RNA–Protein interactions for RNA: ENST00000560356.5

CPNE6-215, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-215ENST00000560356 NKX1-1Q15270 411 aaPredicted RBP21.13■□□□□ 0.97
CPNE6-215ENST00000560356 TONSLQ96HA7 1378 aa21.12■□□□□ 0.97
CPNE6-215ENST00000560356 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
CPNE6-215ENST00000560356 TMOD3Q9NYL9 352 aa21.12■□□□□ 0.97
CPNE6-215ENST00000560356 ATP6V1AP38606 617 aa21.11■□□□□ 0.97
CPNE6-215ENST00000560356 TGFB2P61812 414 aa21.11■□□□□ 0.97
CPNE6-215ENST00000560356 TNRC6CQ9HCJ0 1690 aaKnown RBP21.11■□□□□ 0.97
CPNE6-215ENST00000560356 A0A0G2JLW4 131 aa21.1■□□□□ 0.97
CPNE6-215ENST00000560356 ARHGAP27Q6ZUM4 889 aa21.1■□□□□ 0.97
CPNE6-215ENST00000560356 ASAP1Q9ULH1 1129 aa21.1■□□□□ 0.97
CPNE6-215ENST00000560356 SPG7Q9UQ90 795 aa21.1■□□□□ 0.97
CPNE6-215ENST00000560356 PLEKHG2Q9H7P9 1386 aa21.09■□□□□ 0.97
CPNE6-215ENST00000560356 SLC24A1O60721 1099 aa21.08■□□□□ 0.97
CPNE6-215ENST00000560356 RBM46Q8TBY0 533 aaKnown RBP21.08■□□□□ 0.97
CPNE6-215ENST00000560356 EMILIN1Q9Y6C2 1016 aa21.08■□□□□ 0.97
CPNE6-215ENST00000560356 KDRP35968 1356 aa21.08■□□□□ 0.96
CPNE6-215ENST00000560356 FCHSD2O94868 740 aa21.07■□□□□ 0.96
CPNE6-215ENST00000560356 HTRA3P83110 453 aa21.07■□□□□ 0.96
CPNE6-215ENST00000560356 KLRG1Q96E93 195 aa21.07■□□□□ 0.96
CPNE6-215ENST00000560356 KCPQ6ZWJ8 1503 aa21.06■□□□□ 0.96
CPNE6-215ENST00000560356 DPEP1P16444 411 aa21.06■□□□□ 0.96
CPNE6-215ENST00000560356 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
CPNE6-215ENST00000560356 SBF1O95248 1867 aa21.06■□□□□ 0.96
CPNE6-215ENST00000560356 MYH14Q7Z406 1995 aaKnown RBP21.05■□□□□ 0.96
CPNE6-215ENST00000560356 TMF1P82094 1093 aa21.05■□□□□ 0.96
CPNE6-215ENST00000560356 COL13A1Q5TAT6 717 aaPredicted RBP21.05■□□□□ 0.96
CPNE6-215ENST00000560356 NLGN1Q8N2Q7 840 aa21.05■□□□□ 0.96
CPNE6-215ENST00000560356 CCDC87Q9NVE4 849 aa21.05■□□□□ 0.96
CPNE6-215ENST00000560356 RTCBQ9Y3I0 505 aaKnown RBP21.05■□□□□ 0.96
CPNE6-215ENST00000560356 PCNTO95613 3336 aa21.05■□□□□ 0.96
CPNE6-215ENST00000560356 TRAPPC3LQ5T215 181 aa21.04■□□□□ 0.96
CPNE6-215ENST00000560356 C9orf131Q5VYM1 1079 aa21.04■□□□□ 0.96
CPNE6-215ENST00000560356 ATG3Q9NT62 314 aa21.04■□□□□ 0.96
CPNE6-215ENST00000560356 PHKG2P15735 406 aa21.03■□□□□ 0.96
CPNE6-215ENST00000560356 JMYQ8N9B5 988 aa21.03■□□□□ 0.96
CPNE6-215ENST00000560356 PPM1GO15355 546 aaPredicted RBP21.02■□□□□ 0.96
CPNE6-215ENST00000560356 CAPN15O75808 1086 aa21.02■□□□□ 0.96
CPNE6-215ENST00000560356 FSTL1Q12841 308 aa21.02■□□□□ 0.96
CPNE6-215ENST00000560356 IFNL2Q8IZJ0 200 aa21.02■□□□□ 0.96
CPNE6-215ENST00000560356 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.02■□□□□ 0.96
CPNE6-215ENST00000560356 ADRA2BP18089 450 aa21.01■□□□□ 0.95
CPNE6-215ENST00000560356 PARP3Q9Y6F1 533 aa21.01■□□□□ 0.95
CPNE6-215ENST00000560356 GYS1P13807 737 aa21■□□□□ 0.95
CPNE6-215ENST00000560356 ARHGEF1Q92888 912 aaKnown RBP21■□□□□ 0.95
CPNE6-215ENST00000560356 EYA1Q99502 592 aa21■□□□□ 0.95
CPNE6-215ENST00000560356 KDM2BQ8NHM5 1336 aa21■□□□□ 0.95
CPNE6-215ENST00000560356 SLC4A9Q96Q91 983 aa20.99■□□□□ 0.95
CPNE6-215ENST00000560356 CNTNAP4Q9C0A0 1308 aa20.99■□□□□ 0.95
CPNE6-215ENST00000560356 KCNA3P22001 575 aa20.98■□□□□ 0.95
CPNE6-215ENST00000560356 RFC4P35249 363 aa20.98■□□□□ 0.95
CPNE6-215ENST00000560356 RBM42Q9BTD8 480 aaKnown RBP20.98■□□□□ 0.95
CPNE6-215ENST00000560356 WASHC2AQ641Q2 1341 aa20.98■□□□□ 0.95
CPNE6-215ENST00000560356 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
CPNE6-215ENST00000560356 TNS4Q8IZW8 715 aa20.97■□□□□ 0.95
CPNE6-215ENST00000560356 RNF181Q9P0P0 153 aa20.97■□□□□ 0.95
CPNE6-215ENST00000560356 TJP1Q07157 1748 aa20.96■□□□□ 0.95
CPNE6-215ENST00000560356 TIAM2Q8IVF5 1701 aa20.96■□□□□ 0.95
CPNE6-215ENST00000560356 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
CPNE6-215ENST00000560356 PIM2Q9P1W9 311 aa20.96■□□□□ 0.95
CPNE6-215ENST00000560356 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
CPNE6-215ENST00000560356 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
CPNE6-215ENST00000560356 DALRD3Q5D0E6 543 aaKnown RBP20.94■□□□□ 0.94
CPNE6-215ENST00000560356 PCGF6Q9BYE7 350 aa20.94■□□□□ 0.94
CPNE6-215ENST00000560356 RRAGCQ9HB90 399 aa20.94■□□□□ 0.94
CPNE6-215ENST00000560356 DLEC1Q9Y238 1755 aa20.94■□□□□ 0.94
CPNE6-215ENST00000560356 CCDC88AQ3V6T2 1871 aa20.94■□□□□ 0.94
CPNE6-215ENST00000560356 ADAMTS7Q9UKP4 1686 aa20.93■□□□□ 0.94
CPNE6-215ENST00000560356 PRELPP51888 382 aa20.92■□□□□ 0.94
CPNE6-215ENST00000560356 CDCA8Q53HL2 280 aa20.92■□□□□ 0.94
CPNE6-215ENST00000560356 SMC1BQ8NDV3 1235 aa20.92■□□□□ 0.94
CPNE6-215ENST00000560356 KDM6AO15550 1401 aaPredicted RBP20.92■□□□□ 0.94
CPNE6-215ENST00000560356 AFDNP55196 1824 aaKnown RBP20.92■□□□□ 0.94
CPNE6-215ENST00000560356 ERVV-2B6SEH9 535 aa20.91■□□□□ 0.94
CPNE6-215ENST00000560356 DDR1Q08345 913 aa20.9■□□□□ 0.94
CPNE6-215ENST00000560356 SRP68Q9UHB9 627 aaKnown RBP20.9■□□□□ 0.94
CPNE6-215ENST00000560356 USP42Q9H9J4 1324 aaKnown RBP20.89■□□□□ 0.93
CPNE6-215ENST00000560356 HSP90AB1P08238 724 aaKnown RBP20.89■□□□□ 0.93
CPNE6-215ENST00000560356 CHRNA5P30532 468 aa20.89■□□□□ 0.93
CPNE6-215ENST00000560356 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.93
CPNE6-215ENST00000560356 FKBP8Q14318 412 aa20.88■□□□□ 0.93
CPNE6-215ENST00000560356 POLKQ9UBT6 870 aa20.88■□□□□ 0.93
CPNE6-215ENST00000560356 SCN11AQ9UI33 1791 aa20.87■□□□□ 0.93
CPNE6-215ENST00000560356 NRXN2Q9P2S2 1712 aa20.87■□□□□ 0.93
CPNE6-215ENST00000560356 ZC3H4Q9UPT8 1303 aaKnown RBP20.86■□□□□ 0.93
CPNE6-215ENST00000560356 HSPA1AP0DMV8 641 aaKnown RBP20.86■□□□□ 0.93
CPNE6-215ENST00000560356 HSPA1BP0DMV9 641 aaKnown RBP20.86■□□□□ 0.93
CPNE6-215ENST00000560356 CRKLP46109 303 aaKnown RBP20.86■□□□□ 0.93
CPNE6-215ENST00000560356 RASSF7Q02833 373 aa20.86■□□□□ 0.93
CPNE6-215ENST00000560356 VIRMAQ69YN4 1812 aaKnown RBP20.85■□□□□ 0.93
CPNE6-215ENST00000560356 CABP4P57796 275 aa20.85■□□□□ 0.93
CPNE6-215ENST00000560356 PTCD1O75127 700 aaKnown RBP20.84■□□□□ 0.93
CPNE6-215ENST00000560356 ZNF530Q6P9A1 599 aaPredicted RBP20.84■□□□□ 0.93
CPNE6-215ENST00000560356 POLRMTO00411 1230 aaKnown RBP20.83■□□□□ 0.93
CPNE6-215ENST00000560356 PLEKHO1Q53GL0 409 aaPredicted RBP20.82■□□□□ 0.92
CPNE6-215ENST00000560356 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
CPNE6-215ENST00000560356 DICER1Q9UPY3 1922 aaKnown RBP20.81■□□□□ 0.92
CPNE6-215ENST00000560356 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
CPNE6-215ENST00000560356 GLTPD2A6NH11 291 aa20.8■□□□□ 0.92
CPNE6-215ENST00000560356 VEGFAP15692 232 aaPredicted RBP20.79■□□□□ 0.92
CPNE6-215ENST00000560356 LMNB1P20700 586 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms