RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 SALL3Q9BXA9 1300 aa25.27■■□□□ 1.64
PSMA4-218ENST00000560099 LRRC37A3O60309 1634 aa25.27■■□□□ 1.64
PSMA4-218ENST00000560099 GOLGA6L22H0YM25 854 aa25.27■■□□□ 1.64
PSMA4-218ENST00000560099 HTATSF1O43719 755 aaKnown RBP25.27■■□□□ 1.64
PSMA4-218ENST00000560099 IL17REQ8NFR9 667 aa25.27■■□□□ 1.64
PSMA4-218ENST00000560099 HOXC9P31274 260 aa25.26■■□□□ 1.63
PSMA4-218ENST00000560099 CCDC30Q5VVM6 783 aa25.26■■□□□ 1.63
PSMA4-218ENST00000560099 ARHGAP23Q9P227 1491 aa25.26■■□□□ 1.63
PSMA4-218ENST00000560099 SLIT1O75093 1534 aa25.26■■□□□ 1.63
PSMA4-218ENST00000560099 FAM208AQ9UK61 1670 aaKnown RBP25.26■■□□□ 1.63
PSMA4-218ENST00000560099 XRN1Q8IZH2 1706 aaKnown RBP25.26■■□□□ 1.63
PSMA4-218ENST00000560099 ST18O60284 1047 aa25.25■■□□□ 1.63
PSMA4-218ENST00000560099 NUCB2P80303 420 aa25.25■■□□□ 1.63
PSMA4-218ENST00000560099 DDX49Q9Y6V7 483 aaKnown RBP25.25■■□□□ 1.63
PSMA4-218ENST00000560099 NWD1Q149M9 1564 aa25.24■■□□□ 1.63
PSMA4-218ENST00000560099 CACNA1FO60840 1977 aa25.24■■□□□ 1.63
PSMA4-218ENST00000560099 TUBGCP6Q96RT7 1819 aa25.24■■□□□ 1.63
PSMA4-218ENST00000560099 KLHL40Q2TBA0 621 aa25.24■■□□□ 1.63
PSMA4-218ENST00000560099 MCTP1Q6DN14 999 aa25.24■■□□□ 1.63
PSMA4-218ENST00000560099 LRRCC1Q9C099 1032 aa25.24■■□□□ 1.63
PSMA4-218ENST00000560099 ATP8B2P98198 1209 aa25.23■■□□□ 1.63
PSMA4-218ENST00000560099 LTV1Q96GA3 475 aaPredicted RBP25.23■■□□□ 1.63
PSMA4-218ENST00000560099 MARF1Q9Y4F3 1742 aaKnown RBP25.23■■□□□ 1.63
PSMA4-218ENST00000560099 GNAI3P08754 354 aa25.23■■□□□ 1.63
PSMA4-218ENST00000560099 LRRFIP2Q9Y608 721 aaKnown RBP25.21■■□□□ 1.63
PSMA4-218ENST00000560099 CWC22Q9HCG8 908 aaKnown RBP25.21■■□□□ 1.63
PSMA4-218ENST00000560099 ZDHHC9Q9Y397 364 aa25.21■■□□□ 1.63
PSMA4-218ENST00000560099 MX1P20591 662 aa25.2■■□□□ 1.63
PSMA4-218ENST00000560099 LMBRD1Q9NUN5 540 aa25.2■■□□□ 1.62
PSMA4-218ENST00000560099 MAP3K5Q99683 1374 aa25.2■■□□□ 1.62
PSMA4-218ENST00000560099 IBTKQ9P2D0 1353 aaPredicted RBP25.2■■□□□ 1.62
PSMA4-218ENST00000560099 CLCN1P35523 988 aa25.19■■□□□ 1.62
PSMA4-218ENST00000560099 TAF7Q15545 349 aaPredicted RBP25.19■■□□□ 1.62
PSMA4-218ENST00000560099 ESYT1Q9BSJ8 1104 aa25.19■■□□□ 1.62
PSMA4-218ENST00000560099 USP44Q9H0E7 712 aa25.19■■□□□ 1.62
PSMA4-218ENST00000560099 KCNA6P17658 529 aa25.19■■□□□ 1.62
PSMA4-218ENST00000560099 USHBP1Q8N6Y0 703 aa25.19■■□□□ 1.62
PSMA4-218ENST00000560099 ABTB2Q8N961 1025 aa25.19■■□□□ 1.62
PSMA4-218ENST00000560099 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
PSMA4-218ENST00000560099 NEK4P51957 841 aa25.17■■□□□ 1.62
PSMA4-218ENST00000560099 SETD1BQ9UPS6 1966 aaKnown RBP25.17■■□□□ 1.62
PSMA4-218ENST00000560099 PHAXQ9H814 394 aaKnown RBP25.16■■□□□ 1.62
PSMA4-218ENST00000560099 PALD1Q9ULE6 856 aa25.16■■□□□ 1.62
PSMA4-218ENST00000560099 CHMLP26374 656 aa25.16■■□□□ 1.62
PSMA4-218ENST00000560099 UNC5CLQ8IV45 518 aa25.16■■□□□ 1.62
PSMA4-218ENST00000560099 RILPL2Q969X0 211 aa25.16■■□□□ 1.62
PSMA4-218ENST00000560099 CHAMP1Q96JM3 812 aa25.16■■□□□ 1.62
PSMA4-218ENST00000560099 THEMISQ8N1K5 641 aaPredicted RBP25.15■■□□□ 1.62
PSMA4-218ENST00000560099 TRIM6-TRIM34B2RNG4 842 aa25.15■■□□□ 1.62
PSMA4-218ENST00000560099 ANKARQ7Z5J8 1434 aa25.15■■□□□ 1.62
PSMA4-218ENST00000560099 STAP2Q9UGK3 403 aa25.14■■□□□ 1.62
PSMA4-218ENST00000560099 N4BP2Q86UW6 1770 aaPredicted RBP25.14■■□□□ 1.61
PSMA4-218ENST00000560099 TMX3Q96JJ7 454 aa25.14■■□□□ 1.61
PSMA4-218ENST00000560099 NCLP19338 710 aaKnown RBP25.13■■□□□ 1.61
PSMA4-218ENST00000560099 HDGFL1Q5TGJ6 251 aa25.13■■□□□ 1.61
PSMA4-218ENST00000560099 CAVIN1Q6NZI2 390 aaKnown RBP25.13■■□□□ 1.61
PSMA4-218ENST00000560099 ESPNB1AK53 854 aa25.13■■□□□ 1.61
PSMA4-218ENST00000560099 IL1RAPL2Q9NP60 686 aa25.13■■□□□ 1.61
PSMA4-218ENST00000560099 SOS1Q07889 1333 aaPredicted RBP25.12■■□□□ 1.61
PSMA4-218ENST00000560099 UBTFL1P0CB47 393 aaPredicted RBP25.12■■□□□ 1.61
PSMA4-218ENST00000560099 BABAM1Q9NWV8 329 aa25.12■■□□□ 1.61
PSMA4-218ENST00000560099 C14orf37Q86TY3 774 aa25.12■■□□□ 1.61
PSMA4-218ENST00000560099 PRPF40AO75400 957 aaKnown RBP25.11■■□□□ 1.61
PSMA4-218ENST00000560099 ANO2Q9NQ90 1003 aa25.11■■□□□ 1.61
PSMA4-218ENST00000560099 NASPP49321 788 aaPredicted RBP25.1■■□□□ 1.61
PSMA4-218ENST00000560099 SSH3Q8TE77 659 aa25.1■■□□□ 1.61
PSMA4-218ENST00000560099 IL25Q9H293 177 aa25.1■■□□□ 1.61
PSMA4-218ENST00000560099 PXDNLA1KZ92 1463 aa25.1■■□□□ 1.61
PSMA4-218ENST00000560099 USP54Q70EL1 1684 aa25.1■■□□□ 1.61
PSMA4-218ENST00000560099 ZNF445P59923 1031 aa25.09■■□□□ 1.61
PSMA4-218ENST00000560099 ZSCAN23Q3MJ62 389 aa25.09■■□□□ 1.61
PSMA4-218ENST00000560099 GPT2Q8TD30 523 aa25.09■■□□□ 1.61
PSMA4-218ENST00000560099 FOXD4L5Q5VV16 416 aaPredicted RBP25.09■■□□□ 1.61
PSMA4-218ENST00000560099 FOXD4L4Q8WXT5 416 aaPredicted RBP25.09■■□□□ 1.61
PSMA4-218ENST00000560099 TRIM44Q96DX7 344 aaPredicted RBP25.09■■□□□ 1.61
PSMA4-218ENST00000560099 EIF2S2P20042 333 aaKnown RBP25.08■■□□□ 1.61
PSMA4-218ENST00000560099 NUTM1Q86Y26 1132 aa25.08■■□□□ 1.61
PSMA4-218ENST00000560099 SRCIN1Q9C0H9 1055 aa25.08■■□□□ 1.61
PSMA4-218ENST00000560099 PPP1R42Q7Z4L9 355 aa25.08■■□□□ 1.61
PSMA4-218ENST00000560099 LGR6Q9HBX8 967 aa25.08■■□□□ 1.61
PSMA4-218ENST00000560099 LTN1O94822 1766 aa25.08■■□□□ 1.61
PSMA4-218ENST00000560099 NOL8Q76FK4 1167 aaKnown RBP25.07■■□□□ 1.6
PSMA4-218ENST00000560099 CEMIPQ8WUJ3 1361 aa25.07■■□□□ 1.6
PSMA4-218ENST00000560099 MCCP23508 829 aa25.06■■□□□ 1.6
PSMA4-218ENST00000560099 NBPF6Q5VWK0 638 aa25.06■■□□□ 1.6
PSMA4-218ENST00000560099 NBPF4Q96M43 638 aa25.06■■□□□ 1.6
PSMA4-218ENST00000560099 RBM27Q9P2N5 1060 aaKnown RBP25.06■■□□□ 1.6
PSMA4-218ENST00000560099 FER1L4A9Z1Z3 1794 aa25.06■■□□□ 1.6
PSMA4-218ENST00000560099 CUL4AQ13619 759 aa25.06■■□□□ 1.6
PSMA4-218ENST00000560099 SURF6O75683 361 aaKnown RBP25.05■■□□□ 1.6
PSMA4-218ENST00000560099 ANAPC15P60006 121 aa25.05■■□□□ 1.6
PSMA4-218ENST00000560099 PPP1R9BQ96SB3 815 aa25.05■■□□□ 1.6
PSMA4-218ENST00000560099 EIF4A1P60842 406 aaKnown RBP25.05■■□□□ 1.6
PSMA4-218ENST00000560099 KCNQ3O43525 872 aa25.04■■□□□ 1.6
PSMA4-218ENST00000560099 MAP4K4O95819 1239 aaPredicted RBP25.04■■□□□ 1.6
PSMA4-218ENST00000560099 NBPF7P0C2Y1 421 aaPredicted RBP25.04■■□□□ 1.6
PSMA4-218ENST00000560099 MCM2P49736 904 aa25.04■■□□□ 1.6
PSMA4-218ENST00000560099 CCDC173Q0VFZ6 552 aa25.04■■□□□ 1.6
PSMA4-218ENST00000560099 POLA2Q14181 598 aa25.04■■□□□ 1.6
PSMA4-218ENST00000560099 UPF3BQ9BZI7 483 aaKnown RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms