RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 RBM42Q9BTD8 480 aaKnown RBP23.17■■□□□ 1.3
AC105339.3-201ENST00000560043 RNMTO43148 476 aaKnown RBP23.16■■□□□ 1.3
AC105339.3-201ENST00000560043 U2AF1L5P0DN76 240 aaPredicted RBP23.16■■□□□ 1.3
AC105339.3-201ENST00000560043 U2AF1Q01081 240 aaKnown RBP eCLIP23.16■■□□□ 1.3
AC105339.3-201ENST00000560043 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
AC105339.3-201ENST00000560043 GAS2L2Q8NHY3 880 aa23.16■■□□□ 1.3
AC105339.3-201ENST00000560043 LGR6Q9HBX8 967 aa23.16■■□□□ 1.3
AC105339.3-201ENST00000560043 ITPK1Q13572 414 aa23.15■■□□□ 1.3
AC105339.3-201ENST00000560043 COL23A1Q86Y22 540 aaPredicted RBP23.15■■□□□ 1.3
AC105339.3-201ENST00000560043 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
AC105339.3-201ENST00000560043 SGIP1Q9BQI5 828 aa23.15■■□□□ 1.3
AC105339.3-201ENST00000560043 RSPH6AQ9H0K4 717 aa23.15■■□□□ 1.3
AC105339.3-201ENST00000560043 TAF1LQ8IZX4 1826 aa23.15■■□□□ 1.3
AC105339.3-201ENST00000560043 PRKAR2BP31323 418 aa23.14■■□□□ 1.29
AC105339.3-201ENST00000560043 SLC52A2Q9HAB3 445 aa23.14■■□□□ 1.29
AC105339.3-201ENST00000560043 TUBGCP6Q96RT7 1819 aa23.13■■□□□ 1.29
AC105339.3-201ENST00000560043 RALBP1Q15311 655 aa23.13■■□□□ 1.29
AC105339.3-201ENST00000560043 C4BP0C0L5 1744 aa23.13■■□□□ 1.29
AC105339.3-201ENST00000560043 SCN11AQ9UI33 1791 aa23.12■■□□□ 1.29
AC105339.3-201ENST00000560043 FCHSD2O94868 740 aa23.12■■□□□ 1.29
AC105339.3-201ENST00000560043 GNAT3A8MTJ3 354 aa23.11■■□□□ 1.29
AC105339.3-201ENST00000560043 POLD1P28340 1107 aa23.11■■□□□ 1.29
AC105339.3-201ENST00000560043 SLC4A9Q96Q91 983 aa23.11■■□□□ 1.29
AC105339.3-201ENST00000560043 ARXQ96QS3 562 aa23.11■■□□□ 1.29
AC105339.3-201ENST00000560043 PTCD1O75127 700 aaKnown RBP23.1■■□□□ 1.29
AC105339.3-201ENST00000560043 PHACTR3Q96KR7 559 aa23.1■■□□□ 1.29
AC105339.3-201ENST00000560043 MAP3K5Q99683 1374 aa23.1■■□□□ 1.29
AC105339.3-201ENST00000560043 GNPATO15228 680 aa23.08■■□□□ 1.29
AC105339.3-201ENST00000560043 SSFA2P28290 1259 aa23.08■■□□□ 1.29
AC105339.3-201ENST00000560043 MRC1P22897 1456 aa23.07■■□□□ 1.28
AC105339.3-201ENST00000560043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.07■■□□□ 1.28
AC105339.3-201ENST00000560043 PHF14O94880 888 aa23.07■■□□□ 1.28
AC105339.3-201ENST00000560043 RC3H1Q5TC82 1133 aaKnown RBP23.07■■□□□ 1.28
AC105339.3-201ENST00000560043 ZNF831Q5JPB2 1677 aa23.06■■□□□ 1.28
AC105339.3-201ENST00000560043 AMIGO3Q86WK7 504 aa23.06■■□□□ 1.28
AC105339.3-201ENST00000560043 IL17REQ8NFR9 667 aa23.06■■□□□ 1.28
AC105339.3-201ENST00000560043 FHDC1Q9C0D6 1143 aaPredicted RBP23.06■■□□□ 1.28
AC105339.3-201ENST00000560043 TEFQ10587 303 aa23.05■■□□□ 1.28
AC105339.3-201ENST00000560043 ADAMTS7Q9UKP4 1686 aa23.05■■□□□ 1.28
AC105339.3-201ENST00000560043 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
AC105339.3-201ENST00000560043 MSL1Q68DK7 614 aa23.04■■□□□ 1.28
AC105339.3-201ENST00000560043 SMIM5Q71RC9 77 aa23.04■■□□□ 1.28
AC105339.3-201ENST00000560043 SYT17Q9BSW7 474 aa23.04■■□□□ 1.28
AC105339.3-201ENST00000560043 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
AC105339.3-201ENST00000560043 CNTNAP4Q9C0A0 1308 aa23.04■■□□□ 1.28
AC105339.3-201ENST00000560043 UBR3Q6ZT12 1888 aa23.03■■□□□ 1.28
AC105339.3-201ENST00000560043 DCAF8L1A6NGE4 600 aa23.03■■□□□ 1.28
AC105339.3-201ENST00000560043 NEFMP07197 916 aa23.03■■□□□ 1.28
AC105339.3-201ENST00000560043 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
AC105339.3-201ENST00000560043 COL24A1Q17RW2 1714 aa23.02■■□□□ 1.28
AC105339.3-201ENST00000560043 RPS6KA4O75676 772 aa23.01■■□□□ 1.27
AC105339.3-201ENST00000560043 TRAPPC3LQ5T215 181 aa23.01■■□□□ 1.27
AC105339.3-201ENST00000560043 RTF1Q92541 710 aaKnown RBP23.01■■□□□ 1.27
AC105339.3-201ENST00000560043 VIRMAQ69YN4 1812 aaKnown RBP23.01■■□□□ 1.27
AC105339.3-201ENST00000560043 ADRA2BP18089 450 aa23■■□□□ 1.27
AC105339.3-201ENST00000560043 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
AC105339.3-201ENST00000560043 TTC5Q8N0Z6 440 aa23■■□□□ 1.27
AC105339.3-201ENST00000560043 PNNQ9H307 717 aaKnown RBP23■■□□□ 1.27
AC105339.3-201ENST00000560043 CEMIPQ8WUJ3 1361 aa23■■□□□ 1.27
AC105339.3-201ENST00000560043 HTATSF1O43719 755 aaKnown RBP22.98■■□□□ 1.27
AC105339.3-201ENST00000560043 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
AC105339.3-201ENST00000560043 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
AC105339.3-201ENST00000560043 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
AC105339.3-201ENST00000560043 COL5A3P25940 1745 aaPredicted RBP22.98■■□□□ 1.27
AC105339.3-201ENST00000560043 ARHGEF1Q92888 912 aaKnown RBP22.96■■□□□ 1.27
AC105339.3-201ENST00000560043 PLEKHF1Q96S99 279 aa22.96■■□□□ 1.27
AC105339.3-201ENST00000560043 KCPQ6ZWJ8 1503 aa22.96■■□□□ 1.27
AC105339.3-201ENST00000560043 RFC4P35249 363 aa22.95■■□□□ 1.26
AC105339.3-201ENST00000560043 ZNF790Q6PG37 636 aa22.95■■□□□ 1.26
AC105339.3-201ENST00000560043 MCM10Q7L590 875 aa22.95■■□□□ 1.26
AC105339.3-201ENST00000560043 CICQ96RK0 1608 aaPredicted RBP22.95■■□□□ 1.26
AC105339.3-201ENST00000560043 CCDC87Q9NVE4 849 aa22.95■■□□□ 1.26
AC105339.3-201ENST00000560043 TJP1Q07157 1748 aa22.94■■□□□ 1.26
AC105339.3-201ENST00000560043 BTBD11A6QL63 1104 aa22.94■■□□□ 1.26
AC105339.3-201ENST00000560043 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
AC105339.3-201ENST00000560043 INTS5Q6P9B9 1019 aaKnown RBP22.94■■□□□ 1.26
AC105339.3-201ENST00000560043 PRKRIP1Q9H875 184 aaPredicted RBP22.94■■□□□ 1.26
AC105339.3-201ENST00000560043 MAPK8IP3Q9UPT6 1336 aa22.93■■□□□ 1.26
AC105339.3-201ENST00000560043 MYH14Q7Z406 1995 aaKnown RBP22.92■■□□□ 1.26
AC105339.3-201ENST00000560043 NFE2L2Q16236 605 aa22.92■■□□□ 1.26
AC105339.3-201ENST00000560043 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
AC105339.3-201ENST00000560043 ZNF496Q96IT1 587 aaPredicted RBP22.92■■□□□ 1.26
AC105339.3-201ENST00000560043 ZNF316A6NFI3 1004 aaPredicted RBP22.91■■□□□ 1.26
AC105339.3-201ENST00000560043 DCTN1Q14203 1278 aa22.91■■□□□ 1.26
AC105339.3-201ENST00000560043 FMNL2Q96PY5 1086 aa22.91■■□□□ 1.26
AC105339.3-201ENST00000560043 TEX13AQ9BXU3 409 aaPredicted RBP22.91■■□□□ 1.26
AC105339.3-201ENST00000560043 STARD3NLO95772 234 aa22.9■■□□□ 1.26
AC105339.3-201ENST00000560043 SIPA1L3O60292 1781 aaPredicted RBP22.9■■□□□ 1.26
AC105339.3-201ENST00000560043 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
AC105339.3-201ENST00000560043 UBR2Q8IWV8 1755 aa22.89■■□□□ 1.26
AC105339.3-201ENST00000560043 CD2APQ9Y5K6 639 aa22.89■■□□□ 1.25
AC105339.3-201ENST00000560043 MMP10P09238 476 aa22.88■■□□□ 1.25
AC105339.3-201ENST00000560043 GYS1P13807 737 aa22.88■■□□□ 1.25
AC105339.3-201ENST00000560043 TAF7Q15545 349 aaPredicted RBP22.88■■□□□ 1.25
AC105339.3-201ENST00000560043 NLGN2Q8NFZ4 835 aa22.88■■□□□ 1.25
AC105339.3-201ENST00000560043 SOS1Q07889 1333 aaPredicted RBP22.87■■□□□ 1.25
AC105339.3-201ENST00000560043 KCNQ3O43525 872 aa22.87■■□□□ 1.25
AC105339.3-201ENST00000560043 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
AC105339.3-201ENST00000560043 ZBTB1Q9Y2K1 713 aa22.87■■□□□ 1.25
AC105339.3-201ENST00000560043 SRP68Q9UHB9 627 aaKnown RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms