RNA–Protein interactions for RNA: ENST00000559840.1

CYCSP38-201, Transcript of cytochrome c, somatic pseudogene 38, humanhuman

BASIC

Gene CYCSP38, Length 322 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP38-201ENST00000559840 SSFA2P28290 1259 aa8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 TNNT2P45379 298 aaPredicted RBP8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 ITPK1Q13572 414 aa8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 POLR3GLQ9BT43 218 aa8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 ASAP1Q9ULH1 1129 aa8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 CD2APQ9Y5K6 639 aa8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.06
CYCSP38-201ENST00000559840 CICQ96RK0 1608 aaPredicted RBP8.45□□□□□ -1.06
CYCSP38-201ENST00000559840 GNPATO15228 680 aa8.45□□□□□ -1.06
CYCSP38-201ENST00000559840 TPRNQ4KMQ1 711 aa8.45□□□□□ -1.06
CYCSP38-201ENST00000559840 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
CYCSP38-201ENST00000559840 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
CYCSP38-201ENST00000559840 ZNF831Q5JPB2 1677 aa8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 COL5A3P25940 1745 aaPredicted RBP8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 PLCB2Q00722 1185 aa8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 WWC3Q9ULE0 1092 aa8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 PXDNLA1KZ92 1463 aa8.44□□□□□ -1.06
CYCSP38-201ENST00000559840 KIAA1551Q9HCM1 1747 aa8.43□□□□□ -1.06
CYCSP38-201ENST00000559840 HSPA5P11021 654 aaKnown RBP8.43□□□□□ -1.06
CYCSP38-201ENST00000559840 ATP6V1AP38606 617 aa8.43□□□□□ -1.06
CYCSP38-201ENST00000559840 SLC4A9Q96Q91 983 aa8.43□□□□□ -1.06
CYCSP38-201ENST00000559840 PCGF6Q9BYE7 350 aa8.43□□□□□ -1.06
CYCSP38-201ENST00000559840 C10orf71Q711Q0 1435 aa8.43□□□□□ -1.06
CYCSP38-201ENST00000559840 MMP10P09238 476 aa8.42□□□□□ -1.06
CYCSP38-201ENST00000559840 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
CYCSP38-201ENST00000559840 AEBP1Q8IUX7 1158 aa8.42□□□□□ -1.06
CYCSP38-201ENST00000559840 PANK3Q9H999 370 aa8.42□□□□□ -1.06
CYCSP38-201ENST00000559840 C4AP0C0L4 1744 aa8.42□□□□□ -1.06
CYCSP38-201ENST00000559840 PCNTO95613 3336 aa8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 KIF13BQ9NQT8 1826 aa8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 CNTNAP4Q9C0A0 1308 aa8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 ZBTB22O15209 634 aa8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 ZNF530Q6P9A1 599 aaPredicted RBP8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
CYCSP38-201ENST00000559840 TJP1Q07157 1748 aa8.4□□□□□ -1.06
CYCSP38-201ENST00000559840 HSP90AB1P08238 724 aaKnown RBP8.4□□□□□ -1.06
CYCSP38-201ENST00000559840 HOMEZQ8IX15 550 aa8.4□□□□□ -1.06
CYCSP38-201ENST00000559840 ZNF526Q8TF50 670 aaPredicted RBP8.4□□□□□ -1.06
CYCSP38-201ENST00000559840 MRC1P22897 1456 aa8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 AMOTQ4VCS5 1084 aa8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 PLEKHO1Q53GL0 409 aaPredicted RBP8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 MORC1Q86VD1 984 aa8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 RBM42Q9BTD8 480 aaKnown RBP8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 GPBP1L1Q9HC44 474 aaPredicted RBP8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 RTCBQ9Y3I0 505 aaKnown RBP8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
CYCSP38-201ENST00000559840 N4BP2Q86UW6 1770 aaPredicted RBP8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 GYS1P13807 737 aa8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 IL13P35225 146 aa8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 CABP4P57796 275 aa8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 TRAPPC3LQ5T215 181 aa8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 RC3H1Q5TC82 1133 aaKnown RBP8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 SULT6B1Q6IMI4 303 aa8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 ARHGEF1Q92888 912 aaKnown RBP8.38□□□□□ -1.07
CYCSP38-201ENST00000559840 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 BRCA1P38398 1863 aaKnown RBP8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 RPS6KA4O75676 772 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 MTHFSP49914 203 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 C1orf141Q5JVX7 400 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 NLGN1Q8N2Q7 840 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 KCPQ6ZWJ8 1503 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 SCN11AQ9UI33 1791 aa8.37□□□□□ -1.07
CYCSP38-201ENST00000559840 KIF7Q2M1P5 1343 aa8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 USP42Q9H9J4 1324 aaKnown RBP8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 A0A0G2JLW4 131 aa8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 RFC4P35249 363 aa8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 CRKLP46109 303 aaKnown RBP8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 TGFB2P61812 414 aa8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 NFATC2IPQ8NCF5 419 aa8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 KNSTRNQ9Y448 316 aa8.36□□□□□ -1.07
CYCSP38-201ENST00000559840 COL3A1P02461 1466 aaPredicted RBP8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 KIF3CO14782 793 aa8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 DPEP1P16444 411 aa8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 DDR1Q08345 913 aa8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 FKBP8Q14318 412 aa8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 CCDC87Q9NVE4 849 aa8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 BCS1LQ9Y276 419 aa8.35□□□□□ -1.07
CYCSP38-201ENST00000559840 HSPA6P17066 643 aa8.34□□□□□ -1.07
CYCSP38-201ENST00000559840 AKAP4Q5JQC9 854 aa8.34□□□□□ -1.07
CYCSP38-201ENST00000559840 INTS5Q6P9B9 1019 aaKnown RBP8.34□□□□□ -1.07
CYCSP38-201ENST00000559840 SLC52A2Q9HAB3 445 aa8.34□□□□□ -1.07
CYCSP38-201ENST00000559840 PARP3Q9Y6F1 533 aa8.34□□□□□ -1.07
CYCSP38-201ENST00000559840 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 SOS1Q07889 1333 aaPredicted RBP8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 UBR2Q8IWV8 1755 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 FCHSD2O94868 740 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 HMOX1P09601 288 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 KCNA3P22001 575 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 DNAJC10Q8IXB1 793 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 COL15A1P39059 1388 aa8.33□□□□□ -1.08
CYCSP38-201ENST00000559840 POLRMTO00411 1230 aaKnown RBP8.32□□□□□ -1.08
CYCSP38-201ENST00000559840 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
CYCSP38-201ENST00000559840 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
CYCSP38-201ENST00000559840 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms