RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 AK7Q96M32 723 aa15.38■□□□□ 0.05
HERC1-204ENST00000559715 ATP10DQ9P241 1426 aa15.37■□□□□ 0.05
HERC1-204ENST00000559715 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
HERC1-204ENST00000559715 KDM6AO15550 1401 aaPredicted RBP15.36■□□□□ 0.05
HERC1-204ENST00000559715 BRCA1P38398 1863 aaKnown RBP15.36■□□□□ 0.05
HERC1-204ENST00000559715 PHF14O94880 888 aa15.36■□□□□ 0.05
HERC1-204ENST00000559715 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
HERC1-204ENST00000559715 TMOD3Q9NYL9 352 aa15.36■□□□□ 0.05
HERC1-204ENST00000559715 N4BP2Q86UW6 1770 aaPredicted RBP15.36■□□□□ 0.05
HERC1-204ENST00000559715 CICQ96RK0 1608 aaPredicted RBP15.35■□□□□ 0.05
HERC1-204ENST00000559715 CLSPNQ9HAW4 1339 aa15.35■□□□□ 0.05
HERC1-204ENST00000559715 C4AP0C0L4 1744 aa15.34■□□□□ 0.05
HERC1-204ENST00000559715 ATP6V1AP38606 617 aa15.34■□□□□ 0.05
HERC1-204ENST00000559715 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
HERC1-204ENST00000559715 ADAMTS7Q9UKP4 1686 aa15.33■□□□□ 0.04
HERC1-204ENST00000559715 ERVV-2B6SEH9 535 aa15.33■□□□□ 0.04
HERC1-204ENST00000559715 GNPATO15228 680 aa15.33■□□□□ 0.04
HERC1-204ENST00000559715 PANK3Q9H999 370 aa15.33■□□□□ 0.04
HERC1-204ENST00000559715 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.04
HERC1-204ENST00000559715 AEBP1Q8IUX7 1158 aa15.32■□□□□ 0.04
HERC1-204ENST00000559715 PCNTO95613 3336 aa15.32■□□□□ 0.04
HERC1-204ENST00000559715 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
HERC1-204ENST00000559715 HSPA5P11021 654 aaKnown RBP15.31■□□□□ 0.04
HERC1-204ENST00000559715 WWC3Q9ULE0 1092 aa15.31■□□□□ 0.04
HERC1-204ENST00000559715 TJP1Q07157 1748 aa15.31■□□□□ 0.04
HERC1-204ENST00000559715 MMP10P09238 476 aa15.3■□□□□ 0.04
HERC1-204ENST00000559715 RC3H1Q5TC82 1133 aaKnown RBP15.3■□□□□ 0.04
HERC1-204ENST00000559715 VIRMAQ69YN4 1812 aaKnown RBP15.3■□□□□ 0.04
HERC1-204ENST00000559715 ARHGEF1Q92888 912 aaKnown RBP15.3■□□□□ 0.04
HERC1-204ENST00000559715 DCAF5Q96JK2 942 aa15.3■□□□□ 0.04
HERC1-204ENST00000559715 C10orf71Q711Q0 1435 aa15.29■□□□□ 0.04
HERC1-204ENST00000559715 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
HERC1-204ENST00000559715 GYS1P13807 737 aa15.28■□□□□ 0.04
HERC1-204ENST00000559715 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
HERC1-204ENST00000559715 KCNA3P22001 575 aa15.27■□□□□ 0.04
HERC1-204ENST00000559715 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.04
HERC1-204ENST00000559715 PLEKHO1Q53GL0 409 aaPredicted RBP15.27■□□□□ 0.04
HERC1-204ENST00000559715 TRAPPC3LQ5T215 181 aa15.27■□□□□ 0.04
HERC1-204ENST00000559715 POLR3GLQ9BT43 218 aa15.27■□□□□ 0.04
HERC1-204ENST00000559715 RTCBQ9Y3I0 505 aaKnown RBP15.27■□□□□ 0.04
HERC1-204ENST00000559715 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.03
HERC1-204ENST00000559715 KIF3CO14782 793 aa15.26■□□□□ 0.03
HERC1-204ENST00000559715 IL13P35225 146 aa15.26■□□□□ 0.03
HERC1-204ENST00000559715 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
HERC1-204ENST00000559715 NLGN1Q8N2Q7 840 aa15.26■□□□□ 0.03
HERC1-204ENST00000559715 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
HERC1-204ENST00000559715 GPBP1L1Q9HC44 474 aaPredicted RBP15.26■□□□□ 0.03
HERC1-204ENST00000559715 A0A0G2JLW4 131 aa15.25■□□□□ 0.03
HERC1-204ENST00000559715 HSP90AB1P08238 724 aaKnown RBP15.25■□□□□ 0.03
HERC1-204ENST00000559715 TGFB2P61812 414 aa15.25■□□□□ 0.03
HERC1-204ENST00000559715 AMOTQ4VCS5 1084 aa15.25■□□□□ 0.03
HERC1-204ENST00000559715 NFATC2IPQ8NCF5 419 aa15.25■□□□□ 0.03
HERC1-204ENST00000559715 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
HERC1-204ENST00000559715 AMER1Q5JTC6 1135 aaPredicted RBP15.24■□□□□ 0.03
HERC1-204ENST00000559715 ZNF526Q8TF50 670 aaPredicted RBP15.24■□□□□ 0.03
HERC1-204ENST00000559715 SBF1O95248 1867 aa15.23■□□□□ 0.03
HERC1-204ENST00000559715 DPEP1P16444 411 aa15.23■□□□□ 0.03
HERC1-204ENST00000559715 MTHFSP49914 203 aa15.23■□□□□ 0.03
HERC1-204ENST00000559715 SULT6B1Q6IMI4 303 aa15.23■□□□□ 0.03
HERC1-204ENST00000559715 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
HERC1-204ENST00000559715 HSPA6P17066 643 aa15.22■□□□□ 0.03
HERC1-204ENST00000559715 CRKLP46109 303 aaKnown RBP15.22■□□□□ 0.03
HERC1-204ENST00000559715 CABP4P57796 275 aa15.22■□□□□ 0.03
HERC1-204ENST00000559715 DDR1Q08345 913 aa15.22■□□□□ 0.03
HERC1-204ENST00000559715 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
HERC1-204ENST00000559715 MORC1Q86VD1 984 aa15.22■□□□□ 0.03
HERC1-204ENST00000559715 AFDNP55196 1824 aaKnown RBP15.22■□□□□ 0.03
HERC1-204ENST00000559715 FKBP8Q14318 412 aa15.21■□□□□ 0.03
HERC1-204ENST00000559715 LGR6Q9HBX8 967 aa15.21■□□□□ 0.03
HERC1-204ENST00000559715 SRP68Q9UHB9 627 aaKnown RBP15.21■□□□□ 0.03
HERC1-204ENST00000559715 MRC1P22897 1456 aa15.2■□□□□ 0.02
HERC1-204ENST00000559715 USP42Q9H9J4 1324 aaKnown RBP15.2■□□□□ 0.02
HERC1-204ENST00000559715 PER1O15534 1290 aaPredicted RBP15.2■□□□□ 0.02
HERC1-204ENST00000559715 RFC4P35249 363 aa15.2■□□□□ 0.02
HERC1-204ENST00000559715 NRXN2Q9P2S2 1712 aa15.2■□□□□ 0.02
HERC1-204ENST00000559715 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
HERC1-204ENST00000559715 KCPQ6ZWJ8 1503 aa15.19■□□□□ 0.02
HERC1-204ENST00000559715 TM4SF1P30408 202 aa15.19■□□□□ 0.02
HERC1-204ENST00000559715 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
HERC1-204ENST00000559715 CCDC87Q9NVE4 849 aa15.18■□□□□ 0.02
HERC1-204ENST00000559715 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
HERC1-204ENST00000559715 DNAJC10Q8IXB1 793 aa15.17■□□□□ 0.02
HERC1-204ENST00000559715 SLC52A2Q9HAB3 445 aa15.17■□□□□ 0.02
HERC1-204ENST00000559715 KIF7Q2M1P5 1343 aa15.17■□□□□ 0.02
HERC1-204ENST00000559715 POLRMTO00411 1230 aaKnown RBP15.16■□□□□ 0.02
HERC1-204ENST00000559715 AKAP4Q5JQC9 854 aa15.16■□□□□ 0.02
HERC1-204ENST00000559715 IFFO2Q5TF58 517 aa15.16■□□□□ 0.02
HERC1-204ENST00000559715 DNAJC5GQ8N7S2 189 aa15.16■□□□□ 0.02
HERC1-204ENST00000559715 KNSTRNQ9Y448 316 aa15.16■□□□□ 0.02
HERC1-204ENST00000559715 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
HERC1-204ENST00000559715 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
HERC1-204ENST00000559715 RNMTO43148 476 aaKnown RBP15.15■□□□□ 0.02
HERC1-204ENST00000559715 FCHSD2O94868 740 aa15.15■□□□□ 0.02
HERC1-204ENST00000559715 CYP19A1P11511 503 aaPredicted RBP15.15■□□□□ 0.02
HERC1-204ENST00000559715 SLC39A6Q13433 755 aa15.15■□□□□ 0.02
HERC1-204ENST00000559715 ARHGAP27Q6ZUM4 889 aa15.15■□□□□ 0.02
HERC1-204ENST00000559715 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
HERC1-204ENST00000559715 NMRK2Q9NPI5 230 aa15.15■□□□□ 0.02
HERC1-204ENST00000559715 SIPA1L3O60292 1781 aaPredicted RBP15.15■□□□□ 0.02
HERC1-204ENST00000559715 DLEC1Q9Y238 1755 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms