RNA–Protein interactions for RNA: ENST00000559680.1

NTRK3-215, Transcript of neurotrophic receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene NTRK3, Length 441 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK3-215ENST00000559680 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
NTRK3-215ENST00000559680 RGPD3A6NKT7 1758 aaPredicted RBP14.04□□□□□ -0.16
NTRK3-215ENST00000559680 RGPD4Q7Z3J3 1758 aa14.04□□□□□ -0.16
NTRK3-215ENST00000559680 PIGBQ92521 554 aa14.03□□□□□ -0.16
NTRK3-215ENST00000559680 UPF1Q92900 1129 aaKnown RBP eCLIP14.03□□□□□ -0.16
NTRK3-215ENST00000559680 SIPA1L3O60292 1781 aaPredicted RBP14.03□□□□□ -0.16
NTRK3-215ENST00000559680 PLSCR1O15162 318 aa14.02□□□□□ -0.17
NTRK3-215ENST00000559680 DCTN1Q14203 1278 aa14.02□□□□□ -0.17
NTRK3-215ENST00000559680 TAF7Q15545 349 aaPredicted RBP14.02□□□□□ -0.17
NTRK3-215ENST00000559680 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
NTRK3-215ENST00000559680 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.17
NTRK3-215ENST00000559680 BTBD11A6QL63 1104 aa14.01□□□□□ -0.17
NTRK3-215ENST00000559680 BABAM1Q9NWV8 329 aa14.01□□□□□ -0.17
NTRK3-215ENST00000559680 PAPPAQ13219 1627 aa14□□□□□ -0.17
NTRK3-215ENST00000559680 PALLDQ8WX93 1383 aa13.99□□□□□ -0.17
NTRK3-215ENST00000559680 LY75O60449 1722 aa13.99□□□□□ -0.17
NTRK3-215ENST00000559680 WDR63Q8IWG1 891 aa13.99□□□□□ -0.17
NTRK3-215ENST00000559680 WWC1Q8IX03 1113 aa13.99□□□□□ -0.17
NTRK3-215ENST00000559680 SALL2Q9Y467 1007 aaPredicted RBP13.99□□□□□ -0.17
NTRK3-215ENST00000559680 IL16Q14005 1332 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 GNAI1P63096 354 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 SLC27A3Q5K4L6 730 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 ZNF790Q6PG37 636 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 THUMPD2Q9BTF0 503 aaKnown RBP13.98□□□□□ -0.17
NTRK3-215ENST00000559680 ATG3Q9NT62 314 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 IFT57Q9NWB7 429 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 TSPYL4Q9UJ04 414 aa13.98□□□□□ -0.17
NTRK3-215ENST00000559680 EP400Q96L91 3159 aa13.97□□□□□ -0.17
NTRK3-215ENST00000559680 KDM3BQ7LBC6 1761 aa13.97□□□□□ -0.17
NTRK3-215ENST00000559680 SOCS7O14512 581 aa13.97□□□□□ -0.17
NTRK3-215ENST00000559680 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
NTRK3-215ENST00000559680 PTF1AQ7RTS3 328 aa13.97□□□□□ -0.17
NTRK3-215ENST00000559680 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
NTRK3-215ENST00000559680 ASAP1Q9ULH1 1129 aa13.97□□□□□ -0.17
NTRK3-215ENST00000559680 LAS1LQ9Y4W2 734 aaKnown RBP13.97□□□□□ -0.17
NTRK3-215ENST00000559680 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.17
NTRK3-215ENST00000559680 ZNF831Q5JPB2 1677 aa13.96□□□□□ -0.17
NTRK3-215ENST00000559680 EN1Q05925 392 aaPredicted RBP13.96□□□□□ -0.17
NTRK3-215ENST00000559680 FMNL2Q96PY5 1086 aa13.96□□□□□ -0.17
NTRK3-215ENST00000559680 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
NTRK3-215ENST00000559680 LOC102724428A0A0B4J2F2 783 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 SIK1P57059 783 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 SLC39A6Q13433 755 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 TXNRD1Q16881 649 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 VSIG10Q8N0Z9 540 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 CAMKK2Q96RR4 588 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 CCNL1Q9UK58 526 aaPredicted RBP13.95□□□□□ -0.18
NTRK3-215ENST00000559680 RREB1Q92766 1687 aa13.95□□□□□ -0.18
NTRK3-215ENST00000559680 SENP3-EIF4A1A0A087X0R7 540 aa13.94□□□□□ -0.18
NTRK3-215ENST00000559680 CHL1O00533 1208 aa13.94□□□□□ -0.18
NTRK3-215ENST00000559680 PTCD1O75127 700 aaKnown RBP13.94□□□□□ -0.18
NTRK3-215ENST00000559680 ATP6V1AP38606 617 aa13.94□□□□□ -0.18
NTRK3-215ENST00000559680 EZH2Q15910 746 aaKnown RBP13.94□□□□□ -0.18
NTRK3-215ENST00000559680 DEFB132Q7Z7B7 95 aa13.94□□□□□ -0.18
NTRK3-215ENST00000559680 TEX13AQ9BXU3 409 aaPredicted RBP13.94□□□□□ -0.18
NTRK3-215ENST00000559680 MYH16Q9H6N6 1097 aa13.94□□□□□ -0.18
NTRK3-215ENST00000559680 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
NTRK3-215ENST00000559680 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
NTRK3-215ENST00000559680 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
NTRK3-215ENST00000559680 CICQ96RK0 1608 aaPredicted RBP13.93□□□□□ -0.18
NTRK3-215ENST00000559680 ZNF521Q96K83 1311 aa13.92□□□□□ -0.18
NTRK3-215ENST00000559680 C5P01031 1676 aa13.92□□□□□ -0.18
NTRK3-215ENST00000559680 ZNF853P0CG23 659 aa13.92□□□□□ -0.18
NTRK3-215ENST00000559680 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
NTRK3-215ENST00000559680 MIS18AQ9NYP9 233 aa13.92□□□□□ -0.18
NTRK3-215ENST00000559680 ZBED9Q6R2W3 1325 aa13.91□□□□□ -0.18
NTRK3-215ENST00000559680 E9PSI1 815 aa13.91□□□□□ -0.18
NTRK3-215ENST00000559680 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
NTRK3-215ENST00000559680 NBPF14Q5TI25 921 aa13.91□□□□□ -0.18
NTRK3-215ENST00000559680 ZNF496Q96IT1 587 aaPredicted RBP13.91□□□□□ -0.18
NTRK3-215ENST00000559680 MBIPQ9NS73 344 aa13.91□□□□□ -0.18
NTRK3-215ENST00000559680 NUP188Q5SRE5 1749 aa13.9□□□□□ -0.18
NTRK3-215ENST00000559680 TAF1LQ8IZX4 1826 aa13.9□□□□□ -0.18
NTRK3-215ENST00000559680 STARD3NLO95772 234 aa13.9□□□□□ -0.18
NTRK3-215ENST00000559680 EIF4A1P60842 406 aaKnown RBP13.9□□□□□ -0.18
NTRK3-215ENST00000559680 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.19
NTRK3-215ENST00000559680 KCNQ3O43525 872 aa13.89□□□□□ -0.19
NTRK3-215ENST00000559680 HOXB7P09629 217 aa13.89□□□□□ -0.19
NTRK3-215ENST00000559680 PROM2Q8N271 834 aa13.89□□□□□ -0.19
NTRK3-215ENST00000559680 COL5A3P25940 1745 aaPredicted RBP13.89□□□□□ -0.19
NTRK3-215ENST00000559680 TJP1Q07157 1748 aa13.89□□□□□ -0.19
NTRK3-215ENST00000559680 LAMB4A4D0S4 1761 aa13.88□□□□□ -0.19
NTRK3-215ENST00000559680 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
NTRK3-215ENST00000559680 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
NTRK3-215ENST00000559680 FANCIQ9NVI1 1328 aa13.88□□□□□ -0.19
NTRK3-215ENST00000559680 C4BP0C0L5 1744 aa13.87□□□□□ -0.19
NTRK3-215ENST00000559680 GIGYF1O75420 1035 aaPredicted RBP13.87□□□□□ -0.19
NTRK3-215ENST00000559680 RC3H1Q5TC82 1133 aaKnown RBP13.87□□□□□ -0.19
NTRK3-215ENST00000559680 AK7Q96M32 723 aa13.87□□□□□ -0.19
NTRK3-215ENST00000559680 CNTNAP4Q9C0A0 1308 aa13.87□□□□□ -0.19
NTRK3-215ENST00000559680 SLFN5Q08AF3 891 aa13.86□□□□□ -0.19
NTRK3-215ENST00000559680 ITPK1Q13572 414 aa13.86□□□□□ -0.19
NTRK3-215ENST00000559680 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
NTRK3-215ENST00000559680 DNAJC10Q8IXB1 793 aa13.86□□□□□ -0.19
NTRK3-215ENST00000559680 TSR2Q969E8 191 aaKnown RBP13.86□□□□□ -0.19
NTRK3-215ENST00000559680 SLC4A9Q96Q91 983 aa13.86□□□□□ -0.19
NTRK3-215ENST00000559680 CYP19A1P11511 503 aaPredicted RBP13.85□□□□□ -0.19
NTRK3-215ENST00000559680 LINC00116Q8NCU8 138 aa13.85□□□□□ -0.19
NTRK3-215ENST00000559680 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
NTRK3-215ENST00000559680 KCNQ4P56696 695 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms