RNA–Protein interactions for RNA: ENST00000559635.1

IPO4-210, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 492 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-210ENST00000559635 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
IPO4-210ENST00000559635 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
IPO4-210ENST00000559635 SMIM5Q71RC9 77 aa18.62■□□□□ 0.57
IPO4-210ENST00000559635 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
IPO4-210ENST00000559635 LRP5O75197 1615 aa18.62■□□□□ 0.57
IPO4-210ENST00000559635 C4BP0C0L5 1744 aa18.62■□□□□ 0.57
IPO4-210ENST00000559635 LOC102724428A0A0B4J2F2 783 aa18.61■□□□□ 0.57
IPO4-210ENST00000559635 FCHSD2O94868 740 aa18.61■□□□□ 0.57
IPO4-210ENST00000559635 ZBTB7AO95365 584 aa18.61■□□□□ 0.57
IPO4-210ENST00000559635 SIK1P57059 783 aa18.61■□□□□ 0.57
IPO4-210ENST00000559635 GNAT3A8MTJ3 354 aa18.6■□□□□ 0.57
IPO4-210ENST00000559635 PTCD1O75127 700 aaKnown RBP18.6■□□□□ 0.57
IPO4-210ENST00000559635 SLC39A6Q13433 755 aa18.6■□□□□ 0.57
IPO4-210ENST00000559635 ITPK1Q13572 414 aa18.6■□□□□ 0.57
IPO4-210ENST00000559635 LINC00116Q8NCU8 138 aa18.6■□□□□ 0.57
IPO4-210ENST00000559635 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
IPO4-210ENST00000559635 SIPA1L3O60292 1781 aaPredicted RBP18.6■□□□□ 0.57
IPO4-210ENST00000559635 QSER1Q2KHR3 1735 aa18.6■□□□□ 0.57
IPO4-210ENST00000559635 ATP6V1AP38606 617 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 TFCP2L1Q9NZI6 479 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 TJP1Q07157 1748 aa18.59■□□□□ 0.57
IPO4-210ENST00000559635 PNPLA7Q6ZV29 1317 aa18.58■□□□□ 0.57
IPO4-210ENST00000559635 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
IPO4-210ENST00000559635 MCM10Q7L590 875 aa18.58■□□□□ 0.56
IPO4-210ENST00000559635 ATF5Q9Y2D1 282 aaPredicted RBP18.58■□□□□ 0.56
IPO4-210ENST00000559635 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
IPO4-210ENST00000559635 UBR3Q6ZT12 1888 aa18.57■□□□□ 0.56
IPO4-210ENST00000559635 AMIGO3Q86WK7 504 aa18.57■□□□□ 0.56
IPO4-210ENST00000559635 PLEKHF1Q96S99 279 aa18.57■□□□□ 0.56
IPO4-210ENST00000559635 SRCAPQ6ZRS2 3230 aa18.57■□□□□ 0.56
IPO4-210ENST00000559635 PHF14O94880 888 aa18.56■□□□□ 0.56
IPO4-210ENST00000559635 MAPK8IP3Q9UPT6 1336 aa18.55■□□□□ 0.56
IPO4-210ENST00000559635 KCPQ6ZWJ8 1503 aa18.55■□□□□ 0.56
IPO4-210ENST00000559635 MSH5O43196 834 aa18.55■□□□□ 0.56
IPO4-210ENST00000559635 TEFQ10587 303 aa18.55■□□□□ 0.56
IPO4-210ENST00000559635 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
IPO4-210ENST00000559635 AK7Q96M32 723 aa18.55■□□□□ 0.56
IPO4-210ENST00000559635 UBR2Q8IWV8 1755 aa18.55■□□□□ 0.56
IPO4-210ENST00000559635 NEFMP07197 916 aa18.54■□□□□ 0.56
IPO4-210ENST00000559635 MYH14Q7Z406 1995 aaKnown RBP18.53■□□□□ 0.56
IPO4-210ENST00000559635 RTF1Q92541 710 aaKnown RBP18.53■□□□□ 0.56
IPO4-210ENST00000559635 THUMPD2Q9BTF0 503 aaKnown RBP18.53■□□□□ 0.56
IPO4-210ENST00000559635 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
IPO4-210ENST00000559635 ANP32CO43423 234 aa18.52■□□□□ 0.56
IPO4-210ENST00000559635 KCNQ3O43525 872 aa18.52■□□□□ 0.56
IPO4-210ENST00000559635 NFE2L2Q16236 605 aa18.52■□□□□ 0.56
IPO4-210ENST00000559635 COL23A1Q86Y22 540 aaPredicted RBP18.52■□□□□ 0.56
IPO4-210ENST00000559635 SPON1Q9HCB6 807 aa18.52■□□□□ 0.56
IPO4-210ENST00000559635 ZNF831Q5JPB2 1677 aa18.52■□□□□ 0.56
IPO4-210ENST00000559635 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.55
IPO4-210ENST00000559635 SENP3-EIF4A1A0A087X0R7 540 aa18.51■□□□□ 0.55
IPO4-210ENST00000559635 GNPATO15228 680 aa18.51■□□□□ 0.55
IPO4-210ENST00000559635 MSL1Q68DK7 614 aa18.51■□□□□ 0.55
IPO4-210ENST00000559635 ADAMTS8Q9UP79 889 aa18.51■□□□□ 0.55
IPO4-210ENST00000559635 DNAJC10Q8IXB1 793 aa18.5■□□□□ 0.55
IPO4-210ENST00000559635 NEUROD2Q15784 382 aa18.49■□□□□ 0.55
IPO4-210ENST00000559635 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
IPO4-210ENST00000559635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.48■□□□□ 0.55
IPO4-210ENST00000559635 TTC5Q8N0Z6 440 aa18.48■□□□□ 0.55
IPO4-210ENST00000559635 MTFR1LQ9H019 292 aa18.48■□□□□ 0.55
IPO4-210ENST00000559635 MIS18AQ9NYP9 233 aa18.48■□□□□ 0.55
IPO4-210ENST00000559635 PPP1R1BQ9UD71 204 aaPredicted RBP18.48■□□□□ 0.55
IPO4-210ENST00000559635 C4AP0C0L4 1744 aa18.47■□□□□ 0.55
IPO4-210ENST00000559635 BTBD11A6QL63 1104 aa18.47■□□□□ 0.55
IPO4-210ENST00000559635 PTGER2P43116 358 aa18.47■□□□□ 0.55
IPO4-210ENST00000559635 ZNF496Q96IT1 587 aaPredicted RBP18.47■□□□□ 0.55
IPO4-210ENST00000559635 PNNQ9H307 717 aaKnown RBP18.47■□□□□ 0.55
IPO4-210ENST00000559635 CRKLP46109 303 aaKnown RBP18.46■□□□□ 0.55
IPO4-210ENST00000559635 RIPK4P57078 832 aa18.46■□□□□ 0.55
IPO4-210ENST00000559635 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
IPO4-210ENST00000559635 TMPOP42166 694 aaKnown RBP18.45■□□□□ 0.54
IPO4-210ENST00000559635 ZNF790Q6PG37 636 aa18.45■□□□□ 0.54
IPO4-210ENST00000559635 CNTNAP4Q9C0A0 1308 aa18.45■□□□□ 0.54
IPO4-210ENST00000559635 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
IPO4-210ENST00000559635 RUNDC1Q96C34 613 aa18.44■□□□□ 0.54
IPO4-210ENST00000559635 HEG1Q9ULI3 1381 aa18.43■□□□□ 0.54
IPO4-210ENST00000559635 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
IPO4-210ENST00000559635 PRAMEF22A3QJZ6 481 aa18.43■□□□□ 0.54
IPO4-210ENST00000559635 HTATSF1O43719 755 aaKnown RBP18.43■□□□□ 0.54
IPO4-210ENST00000559635 KLHL34Q8N239 644 aa18.43■□□□□ 0.54
IPO4-210ENST00000559635 SGIP1Q9BQI5 828 aa18.43■□□□□ 0.54
IPO4-210ENST00000559635 SSFA2P28290 1259 aa18.42■□□□□ 0.54
IPO4-210ENST00000559635 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
IPO4-210ENST00000559635 RTCBQ9Y3I0 505 aaKnown RBP18.42■□□□□ 0.54
IPO4-210ENST00000559635 CYP19A1P11511 503 aaPredicted RBP18.41■□□□□ 0.54
IPO4-210ENST00000559635 CCDC87Q9NVE4 849 aa18.41■□□□□ 0.54
IPO4-210ENST00000559635 ZBTB1Q9Y2K1 713 aa18.41■□□□□ 0.54
IPO4-210ENST00000559635 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
IPO4-210ENST00000559635 PIP4K2AP48426 406 aaPredicted RBP18.4■□□□□ 0.54
IPO4-210ENST00000559635 TAF7Q15545 349 aaPredicted RBP18.4■□□□□ 0.54
IPO4-210ENST00000559635 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
IPO4-210ENST00000559635 FLAD1Q8NFF5 587 aa18.4■□□□□ 0.54
IPO4-210ENST00000559635 ARHGEF1Q92888 912 aaKnown RBP18.4■□□□□ 0.54
IPO4-210ENST00000559635 FMNL2Q96PY5 1086 aa18.4■□□□□ 0.54
IPO4-210ENST00000559635 SRP68Q9UHB9 627 aaKnown RBP18.4■□□□□ 0.54
IPO4-210ENST00000559635 APAF1O14727 1248 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms