RNA–Protein interactions for RNA: ENST00000559499.1

PCSK6-210, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 2

Gene PCSK6, Length 3,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-210ENST00000559499 PTPRCP08575 1304 aa19.25■□□□□ 0.67
PCSK6-210ENST00000559499 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
PCSK6-210ENST00000559499 NFATC2IPQ8NCF5 419 aa19.25■□□□□ 0.67
PCSK6-210ENST00000559499 KDM4FA0A1W2PPD8 638 aa19.24■□□□□ 0.67
PCSK6-210ENST00000559499 AKAP4Q5JQC9 854 aa19.24■□□□□ 0.67
PCSK6-210ENST00000559499 FOXD4L1Q9NU39 408 aa19.24■□□□□ 0.67
PCSK6-210ENST00000559499 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
PCSK6-210ENST00000559499 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
PCSK6-210ENST00000559499 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
PCSK6-210ENST00000559499 ERBB3P21860 1342 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 PNMA6EA0A0J9YXQ4 647 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 JARID2Q92833 1246 aaPredicted RBP19.22■□□□□ 0.67
PCSK6-210ENST00000559499 NPHP3Q7Z494 1330 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 ANKRD44Q8N8A2 993 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
PCSK6-210ENST00000559499 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
PCSK6-210ENST00000559499 GNAI2P04899 355 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 RTL1A6NKG5 1358 aa19.22■□□□□ 0.67
PCSK6-210ENST00000559499 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
PCSK6-210ENST00000559499 TATP17735 454 aaPredicted RBP19.21■□□□□ 0.67
PCSK6-210ENST00000559499 BRINP3Q76B58 766 aa19.21■□□□□ 0.67
PCSK6-210ENST00000559499 ZNF330Q9Y3S2 320 aaPredicted RBP19.21■□□□□ 0.67
PCSK6-210ENST00000559499 RGS12O14924 1447 aa19.2■□□□□ 0.66
PCSK6-210ENST00000559499 PXDNQ92626 1479 aa19.2■□□□□ 0.66
PCSK6-210ENST00000559499 UBTFL1P0CB47 393 aaPredicted RBP19.2■□□□□ 0.66
PCSK6-210ENST00000559499 ARXQ96QS3 562 aa19.2■□□□□ 0.66
PCSK6-210ENST00000559499 TBC1D32Q96NH3 1257 aa19.2■□□□□ 0.66
PCSK6-210ENST00000559499 LTN1O94822 1766 aa19.19■□□□□ 0.66
PCSK6-210ENST00000559499 AMOTQ4VCS5 1084 aa19.19■□□□□ 0.66
PCSK6-210ENST00000559499 DCTPP1Q9H773 170 aa19.19■□□□□ 0.66
PCSK6-210ENST00000559499 KAT6BQ8WYB5 2073 aa19.19■□□□□ 0.66
PCSK6-210ENST00000559499 SLAIN2Q9P270 581 aa19.19■□□□□ 0.66
PCSK6-210ENST00000559499 NBPF7P0C2Y1 421 aaPredicted RBP19.18■□□□□ 0.66
PCSK6-210ENST00000559499 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
PCSK6-210ENST00000559499 BECN1Q14457 450 aa19.18■□□□□ 0.66
PCSK6-210ENST00000559499 CWF19L2Q2TBE0 894 aaKnown RBP19.18■□□□□ 0.66
PCSK6-210ENST00000559499 TBC1D9Q6ZT07 1266 aa19.18■□□□□ 0.66
PCSK6-210ENST00000559499 RGPD1P0DJD0 1748 aa19.18■□□□□ 0.66
PCSK6-210ENST00000559499 MAP4K4O95819 1239 aaPredicted RBP19.18■□□□□ 0.66
PCSK6-210ENST00000559499 PLEKHM2Q8IWE5 1019 aa19.18■□□□□ 0.66
PCSK6-210ENST00000559499 RGPD2P0DJD1 1756 aa19.17■□□□□ 0.66
PCSK6-210ENST00000559499 GSPT1P15170 499 aaKnown RBP19.17■□□□□ 0.66
PCSK6-210ENST00000559499 RPAP2Q8IXW5 612 aaPredicted RBP19.17■□□□□ 0.66
PCSK6-210ENST00000559499 HMMRO75330 724 aa19.17■□□□□ 0.66
PCSK6-210ENST00000559499 ZNF142P52746 1687 aaPredicted RBP19.17■□□□□ 0.66
PCSK6-210ENST00000559499 NFAT5O94916 1531 aa19.17■□□□□ 0.66
PCSK6-210ENST00000559499 EVA1CP58658 441 aa19.17■□□□□ 0.66
PCSK6-210ENST00000559499 RBM42Q9BTD8 480 aaKnown RBP19.17■□□□□ 0.66
PCSK6-210ENST00000559499 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
PCSK6-210ENST00000559499 MST1RQ04912 1400 aa19.16■□□□□ 0.66
PCSK6-210ENST00000559499 KIF24Q5T7B8 1368 aa19.16■□□□□ 0.66
PCSK6-210ENST00000559499 OS9Q13438 667 aaPredicted RBP19.16■□□□□ 0.66
PCSK6-210ENST00000559499 TBC1D2Q9BYX2 928 aa19.16■□□□□ 0.66
PCSK6-210ENST00000559499 USP44Q9H0E7 712 aa19.16■□□□□ 0.66
PCSK6-210ENST00000559499 MAP3K2Q9Y2U5 619 aa19.15■□□□□ 0.66
PCSK6-210ENST00000559499 TRIM6-TRIM34B2RNG4 842 aa19.15■□□□□ 0.66
PCSK6-210ENST00000559499 PTCD1O75127 700 aaKnown RBP19.15■□□□□ 0.66
PCSK6-210ENST00000559499 SURF6O75683 361 aaKnown RBP19.15■□□□□ 0.66
PCSK6-210ENST00000559499 RILPL2Q969X0 211 aa19.15■□□□□ 0.66
PCSK6-210ENST00000559499 C9orf78Q9NZ63 289 aaPredicted RBP19.15■□□□□ 0.66
PCSK6-210ENST00000559499 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
PCSK6-210ENST00000559499 NUTM1Q86Y26 1132 aa19.15■□□□□ 0.66
PCSK6-210ENST00000559499 SRGAP3O43295 1099 aa19.14■□□□□ 0.65
PCSK6-210ENST00000559499 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
PCSK6-210ENST00000559499 NFKBIBQ15653 356 aa19.14■□□□□ 0.65
PCSK6-210ENST00000559499 DNAAF4Q8WXU2 420 aa19.14■□□□□ 0.65
PCSK6-210ENST00000559499 GNAI3P08754 354 aa19.13■□□□□ 0.65
PCSK6-210ENST00000559499 BMP2KLQ5H9B9 411 aa19.13■□□□□ 0.65
PCSK6-210ENST00000559499 TTC5Q8N0Z6 440 aa19.13■□□□□ 0.65
PCSK6-210ENST00000559499 GIGYF1O75420 1035 aaPredicted RBP19.13■□□□□ 0.65
PCSK6-210ENST00000559499 PPP1R42Q7Z4L9 355 aa19.13■□□□□ 0.65
PCSK6-210ENST00000559499 MARF1Q9Y4F3 1742 aaKnown RBP19.13■□□□□ 0.65
PCSK6-210ENST00000559499 ZNF496Q96IT1 587 aaPredicted RBP19.12■□□□□ 0.65
PCSK6-210ENST00000559499 SPG7Q9UQ90 795 aa19.12■□□□□ 0.65
PCSK6-210ENST00000559499 ATP10DQ9P241 1426 aa19.12■□□□□ 0.65
PCSK6-210ENST00000559499 CYP27B1O15528 508 aa19.12■□□□□ 0.65
PCSK6-210ENST00000559499 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
PCSK6-210ENST00000559499 SPATA31A3Q5VYP0 1347 aa19.11■□□□□ 0.65
PCSK6-210ENST00000559499 CABP4P57796 275 aa19.11■□□□□ 0.65
PCSK6-210ENST00000559499 RIC3Q7Z5B4 369 aa19.11■□□□□ 0.65
PCSK6-210ENST00000559499 CCDC9Q9Y3X0 531 aaKnown RBP19.11■□□□□ 0.65
PCSK6-210ENST00000559499 PHKG2P15735 406 aa19.1■□□□□ 0.65
PCSK6-210ENST00000559499 SDSP20132 328 aa19.1■□□□□ 0.65
PCSK6-210ENST00000559499 ZNF790Q6PG37 636 aa19.1■□□□□ 0.65
PCSK6-210ENST00000559499 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
PCSK6-210ENST00000559499 USP16Q9Y5T5 823 aa19.1■□□□□ 0.65
PCSK6-210ENST00000559499 CEMIPQ8WUJ3 1361 aa19.1■□□□□ 0.65
PCSK6-210ENST00000559499 SIL1Q9H173 461 aa19.1■□□□□ 0.65
PCSK6-210ENST00000559499 PA2G4Q9UQ80 394 aaKnown RBP19.1■□□□□ 0.65
PCSK6-210ENST00000559499 IFNL2Q8IZJ0 200 aa19.09■□□□□ 0.65
PCSK6-210ENST00000559499 TTC22Q5TAA0 569 aa19.09■□□□□ 0.65
PCSK6-210ENST00000559499 LRRCC1Q9C099 1032 aa19.09■□□□□ 0.65
PCSK6-210ENST00000559499 CDC45O75419 566 aa19.08■□□□□ 0.65
PCSK6-210ENST00000559499 LARP1Q6PKG0 1096 aaKnown RBP19.08■□□□□ 0.65
PCSK6-210ENST00000559499 ATP5J2-PTCD1G3V325 749 aa19.08■□□□□ 0.65
PCSK6-210ENST00000559499 SYTL4Q96C24 671 aaPredicted RBP19.07■□□□□ 0.64
PCSK6-210ENST00000559499 SLC52A2Q9HAB3 445 aa19.07■□□□□ 0.64
PCSK6-210ENST00000559499 NOL8Q76FK4 1167 aaKnown RBP19.07■□□□□ 0.64
PCSK6-210ENST00000559499 HSCBQ8IWL3 235 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms