RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
PSEN1-224ENST00000559361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.83■■□□□ 1.256e-6■□□□□ 8.9
PSEN1-224ENST00000559361 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
PSEN1-224ENST00000559361 ITPK1Q13572 414 aa22.82■■□□□ 1.24
PSEN1-224ENST00000559361 EMILIN1Q9Y6C2 1016 aa22.82■■□□□ 1.24
PSEN1-224ENST00000559361 KIAA1551Q9HCM1 1747 aa22.82■■□□□ 1.24
PSEN1-224ENST00000559361 NPC1L1Q9UHC9 1359 aa22.81■■□□□ 1.24
PSEN1-224ENST00000559361 PER1O15534 1290 aaPredicted RBP22.81■■□□□ 1.24
PSEN1-224ENST00000559361 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
PSEN1-224ENST00000559361 SPG7Q9UQ90 795 aa22.81■■□□□ 1.24
PSEN1-224ENST00000559361 PXDNLA1KZ92 1463 aa22.79■■□□□ 1.24
PSEN1-224ENST00000559361 GNPATO15228 680 aa22.79■■□□□ 1.24
PSEN1-224ENST00000559361 ANKRD26Q9UPS8 1709 aa22.79■■□□□ 1.24
PSEN1-224ENST00000559361 MMP10P09238 476 aa22.78■■□□□ 1.24
PSEN1-224ENST00000559361 APLP1P51693 650 aa22.78■■□□□ 1.24
PSEN1-224ENST00000559361 TGFB2P61812 414 aa22.78■■□□□ 1.24
PSEN1-224ENST00000559361 DNAJC5GQ8N7S2 189 aa22.78■■□□□ 1.24
PSEN1-224ENST00000559361 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
PSEN1-224ENST00000559361 N4BP2Q86UW6 1770 aaPredicted RBP22.77■■□□□ 1.24
PSEN1-224ENST00000559361 ATP6V1AP38606 617 aa22.77■■□□□ 1.24
PSEN1-224ENST00000559361 ATG3Q9NT62 314 aa22.77■■□□□ 1.24
PSEN1-224ENST00000559361 TOMM70O94826 608 aa22.76■■□□□ 1.23
PSEN1-224ENST00000559361 EYA1Q99502 592 aa22.76■■□□□ 1.23
PSEN1-224ENST00000559361 PHKG2P15735 406 aa22.75■■□□□ 1.23
PSEN1-224ENST00000559361 AMER1Q5JTC6 1135 aaPredicted RBP22.75■■□□□ 1.23
PSEN1-224ENST00000559361 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
PSEN1-224ENST00000559361 NLGN1Q8N2Q7 840 aa22.74■■□□□ 1.23
PSEN1-224ENST00000559361 BRCA1P38398 1863 aaKnown RBP22.74■■□□□ 1.23
PSEN1-224ENST00000559361 ZNF831Q5JPB2 1677 aa22.74■■□□□ 1.23
PSEN1-224ENST00000559361 KDRP35968 1356 aa22.73■■□□□ 1.23
PSEN1-224ENST00000559361 C10orf71Q711Q0 1435 aa22.73■■□□□ 1.23
PSEN1-224ENST00000559361 A0A0G2JLW4 131 aa22.72■■□□□ 1.23
PSEN1-224ENST00000559361 TRAPPC3LQ5T215 181 aa22.72■■□□□ 1.23
PSEN1-224ENST00000559361 SLC4A9Q96Q91 983 aa22.72■■□□□ 1.23
PSEN1-224ENST00000559361 RC3H1Q5TC82 1133 aaKnown RBP22.71■■□□□ 1.23
PSEN1-224ENST00000559361 BCS1LQ9Y276 419 aa22.71■■□□□ 1.23
PSEN1-224ENST00000559361 RTCBQ9Y3I0 505 aaKnown RBP22.71■■□□□ 1.23
PSEN1-224ENST00000559361 PLEKHG2Q9H7P9 1386 aa22.71■■□□□ 1.23
PSEN1-224ENST00000559361 PPM1GO15355 546 aaPredicted RBP22.7■■□□□ 1.22
PSEN1-224ENST00000559361 MYH14Q7Z406 1995 aaKnown RBP22.7■■□□□ 1.22
PSEN1-224ENST00000559361 ADRA2BP18089 450 aa22.69■■□□□ 1.22
PSEN1-224ENST00000559361 ARHGEF1Q92888 912 aaKnown RBP22.69■■□□□ 1.22
PSEN1-224ENST00000559361 POLKQ9UBT6 870 aa22.69■■□□□ 1.22
PSEN1-224ENST00000559361 GYS1P13807 737 aa22.68■■□□□ 1.22
PSEN1-224ENST00000559361 NMRK2Q9NPI5 230 aa22.68■■□□□ 1.22
PSEN1-224ENST00000559361 ARFGEF1Q9Y6D6 1849 aa22.68■■□□□ 1.22
PSEN1-224ENST00000559361 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
PSEN1-224ENST00000559361 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
PSEN1-224ENST00000559361 ERVV-2B6SEH9 535 aa22.67■■□□□ 1.22
PSEN1-224ENST00000559361 DPEP1P16444 411 aa22.67■■□□□ 1.22
PSEN1-224ENST00000559361 KCNA3P22001 575 aa22.67■■□□□ 1.22
PSEN1-224ENST00000559361 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
PSEN1-224ENST00000559361 CCDC87Q9NVE4 849 aa22.67■■□□□ 1.22
PSEN1-224ENST00000559361 CNTNAP4Q9C0A0 1308 aa22.66■■□□□ 1.22
PSEN1-224ENST00000559361 RPS6KA4O75676 772 aa22.65■■□□□ 1.22
PSEN1-224ENST00000559361 MORC1Q86VD1 984 aa22.65■■□□□ 1.22
PSEN1-224ENST00000559361 RBM46Q8TBY0 533 aaKnown RBP22.65■■□□□ 1.22
PSEN1-224ENST00000559361 FCHSD2O94868 740 aa22.64■■□□□ 1.21
PSEN1-224ENST00000559361 EIF4A2Q14240 407 aaKnown RBP22.64■■□□□ 1.21
PSEN1-224ENST00000559361 WDR90Q96KV7 1748 aa22.64■■□□□ 1.21
PSEN1-224ENST00000559361 CC2D1BQ5T0F9 858 aaKnown RBP22.63■■□□□ 1.21
PSEN1-224ENST00000559361 RFC4P35249 363 aa22.62■■□□□ 1.21
PSEN1-224ENST00000559361 RALBP1Q15311 655 aa22.62■■□□□ 1.21
PSEN1-224ENST00000559361 DCAF5Q96JK2 942 aa22.62■■□□□ 1.21
PSEN1-224ENST00000559361 RBM42Q9BTD8 480 aaKnown RBP22.62■■□□□ 1.21
PSEN1-224ENST00000559361 PARP3Q9Y6F1 533 aa22.62■■□□□ 1.21
PSEN1-224ENST00000559361 PCNTO95613 3336 aa22.62■■□□□ 1.21
PSEN1-224ENST00000559361 C9orf131Q5VYM1 1079 aa22.61■■□□□ 1.21
PSEN1-224ENST00000559361 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
PSEN1-224ENST00000559361 SBF1O95248 1867 aa22.6■■□□□ 1.21
PSEN1-224ENST00000559361 JMYQ8N9B5 988 aa22.59■■□□□ 1.21
PSEN1-224ENST00000559361 PIM2Q9P1W9 311 aa22.59■■□□□ 1.21
PSEN1-224ENST00000559361 KDM6AO15550 1401 aaPredicted RBP22.58■■□□□ 1.21
PSEN1-224ENST00000559361 FSTL1Q12841 308 aa22.58■■□□□ 1.21
PSEN1-224ENST00000559361 KLRG1Q96E93 195 aa22.58■■□□□ 1.21
PSEN1-224ENST00000559361 ANP32CO43423 234 aa22.57■■□□□ 1.2
PSEN1-224ENST00000559361 PLEKHO1Q53GL0 409 aaPredicted RBP22.56■■□□□ 1.2
PSEN1-224ENST00000559361 PRKRIP1Q9H875 184 aaPredicted RBP22.56■■□□□ 1.2
PSEN1-224ENST00000559361 HTRA3P83110 453 aa22.55■■□□□ 1.2
PSEN1-224ENST00000559361 DALRD3Q5D0E6 543 aaKnown RBP22.55■■□□□ 1.2
PSEN1-224ENST00000559361 KCPQ6ZWJ8 1503 aa22.54■■□□□ 1.2
PSEN1-224ENST00000559361 CABP4P57796 275 aa22.54■■□□□ 1.2
PSEN1-224ENST00000559361 DDR1Q08345 913 aa22.54■■□□□ 1.2
PSEN1-224ENST00000559361 FKBP8Q14318 412 aa22.54■■□□□ 1.2
PSEN1-224ENST00000559361 DIEXFQ68CQ4 756 aaKnown RBP22.54■■□□□ 1.2
PSEN1-224ENST00000559361 C16orf71Q8IYS4 520 aaPredicted RBP22.54■■□□□ 1.2
PSEN1-224ENST00000559361 KDM2BQ8NHM5 1336 aa22.54■■□□□ 1.2
PSEN1-224ENST00000559361 USP42Q9H9J4 1324 aaKnown RBP22.54■■□□□ 1.2
PSEN1-224ENST00000559361 CRKLP46109 303 aaKnown RBP22.53■■□□□ 1.2
PSEN1-224ENST00000559361 AMOTQ4VCS5 1084 aa22.53■■□□□ 1.2
PSEN1-224ENST00000559361 SRP68Q9UHB9 627 aaKnown RBP22.53■■□□□ 1.2
PSEN1-224ENST00000559361 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
PSEN1-224ENST00000559361 COL13A1Q5TAT6 717 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-224ENST00000559361 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
PSEN1-224ENST00000559361 PTCD1O75127 700 aaKnown RBP22.51■■□□□ 1.19
PSEN1-224ENST00000559361 TM4SF1P30408 202 aa22.51■■□□□ 1.19
PSEN1-224ENST00000559361 RNF181Q9P0P0 153 aa22.51■■□□□ 1.19
PSEN1-224ENST00000559361 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
PSEN1-224ENST00000559361 TNRC6CQ9HCJ0 1690 aaKnown RBP22.5■■□□□ 1.19
PSEN1-224ENST00000559361 TNNT2P45379 298 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms