RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ZNF211Q13398 564 aaPredicted RBP19.01■□□□□ 0.63
CASC4-208ENST00000559151 SCG3Q8WXD2 468 aaKnown RBP19.01■□□□□ 0.63
CASC4-208ENST00000559151 PKD2L1Q9P0L9 805 aa19.01■□□□□ 0.63
CASC4-208ENST00000559151 ANO2Q9NQ90 1003 aa19■□□□□ 0.63
CASC4-208ENST00000559151 TSPAN10Q9H1Z9 355 aaPredicted RBP18.99■□□□□ 0.63
CASC4-208ENST00000559151 ARHGEF10LQ9HCE6 1279 aa18.99■□□□□ 0.63
CASC4-208ENST00000559151 WASF2Q9Y6W5 498 aa18.99■□□□□ 0.63
CASC4-208ENST00000559151 A0A0G2JS52 829 aa18.98■□□□□ 0.63
CASC4-208ENST00000559151 SLC4A9Q96Q91 983 aa18.98■□□□□ 0.63
CASC4-208ENST00000559151 EGFL7Q9UHF1 273 aa18.98■□□□□ 0.63
CASC4-208ENST00000559151 ESCO1Q5FWF5 840 aa18.97■□□□□ 0.63
CASC4-208ENST00000559151 GTF3C2Q8WUA4 911 aaPredicted RBP18.97■□□□□ 0.63
CASC4-208ENST00000559151 BIN2Q9UBW5 565 aaPredicted RBP18.97■□□□□ 0.63
CASC4-208ENST00000559151 C21orf2O43822 256 aa18.96■□□□□ 0.63
CASC4-208ENST00000559151 PLA2G2EQ9NZK7 142 aa18.96■□□□□ 0.63
CASC4-208ENST00000559151 H3BRB1 525 aa18.95■□□□□ 0.62
CASC4-208ENST00000559151 FOXO3O43524 673 aa18.95■□□□□ 0.62
CASC4-208ENST00000559151 PRKD2Q9BZL6 878 aa18.95■□□□□ 0.62
CASC4-208ENST00000559151 TUT1Q9H6E5 874 aaKnown RBP18.95■□□□□ 0.62
CASC4-208ENST00000559151 ATAD2Q6PL18 1390 aa18.94■□□□□ 0.62
CASC4-208ENST00000559151 PTCD1O75127 700 aaKnown RBP18.94■□□□□ 0.62
CASC4-208ENST00000559151 IL2RAP01589 272 aa18.94■□□□□ 0.62
CASC4-208ENST00000559151 ADH1AP07327 375 aa18.94■□□□□ 0.62
CASC4-208ENST00000559151 CBLBQ13191 982 aa18.94■□□□□ 0.62
CASC4-208ENST00000559151 TBCELQ5QJ74 424 aa18.94■□□□□ 0.62
CASC4-208ENST00000559151 SNIP1Q8TAD8 396 aaKnown RBP18.94■□□□□ 0.62
CASC4-208ENST00000559151 ZNF428Q96B54 188 aa18.94■□□□□ 0.62
CASC4-208ENST00000559151 DNMT3AQ9Y6K1 912 aaPredicted RBP18.94■□□□□ 0.62
CASC4-208ENST00000559151 CHMP7Q8WUX9 453 aaPredicted RBP18.93■□□□□ 0.62
CASC4-208ENST00000559151 ICMTO60725 284 aa18.92■□□□□ 0.62
CASC4-208ENST00000559151 NAA30Q147X3 362 aaPredicted RBP18.92■□□□□ 0.62
CASC4-208ENST00000559151 A6NJY4 79 aa18.91■□□□□ 0.62
CASC4-208ENST00000559151 SMTNP53814 917 aa18.91■□□□□ 0.62
CASC4-208ENST00000559151 FOXK2Q01167 660 aa18.91■□□□□ 0.62
CASC4-208ENST00000559151 KDF1Q8NAX2 398 aaPredicted RBP18.91■□□□□ 0.62
CASC4-208ENST00000559151 COL26A1Q96A83 441 aa18.91■□□□□ 0.62
CASC4-208ENST00000559151 ITPKCQ96DU7 683 aa18.91■□□□□ 0.62
CASC4-208ENST00000559151 XAGE2Q96GT9 111 aa18.91■□□□□ 0.62
CASC4-208ENST00000559151 MTMR3Q13615 1198 aa18.9■□□□□ 0.62
CASC4-208ENST00000559151 SLC9A9Q8IVB4 645 aa18.9■□□□□ 0.62
CASC4-208ENST00000559151 SCHIP1Q9P0W5 487 aaPredicted RBP18.9■□□□□ 0.62
CASC4-208ENST00000559151 J3QL48 77 aa18.89■□□□□ 0.61
CASC4-208ENST00000559151 MTFR1Q15390 333 aa18.89■□□□□ 0.61
CASC4-208ENST00000559151 GLYCTKQ8IVS8 523 aa18.89■□□□□ 0.61
CASC4-208ENST00000559151 A0A1W2PRU2 124 aa18.88■□□□□ 0.61
CASC4-208ENST00000559151 PPP1R12BO60237 982 aaPredicted RBP18.88■□□□□ 0.61
CASC4-208ENST00000559151 V9GY48 417 aaPredicted RBP18.88■□□□□ 0.61
CASC4-208ENST00000559151 ZIC2O95409 532 aaPredicted RBP18.87■□□□□ 0.61
CASC4-208ENST00000559151 RBM25P49756 843 aaKnown RBP18.87■□□□□ 0.61
CASC4-208ENST00000559151 DNAJC14Q6Y2X3 702 aaPredicted RBP18.87■□□□□ 0.61
CASC4-208ENST00000559151 CNKSR1Q969H4 720 aa18.87■□□□□ 0.61
CASC4-208ENST00000559151 KLF16Q9BXK1 252 aaPredicted RBP18.87■□□□□ 0.61
CASC4-208ENST00000559151 USP3Q9Y6I4 520 aa18.87■□□□□ 0.61
CASC4-208ENST00000559151 TLR1Q15399 786 aa18.86■□□□□ 0.61
CASC4-208ENST00000559151 VTI1AQ96AJ9 217 aa18.86■□□□□ 0.61
CASC4-208ENST00000559151 ZFAND3Q9H8U3 227 aa18.86■□□□□ 0.61
CASC4-208ENST00000559151 TTC24A2A3L6 582 aaPredicted RBP18.85■□□□□ 0.61
CASC4-208ENST00000559151 GDF9O60383 454 aa18.85■□□□□ 0.61
CASC4-208ENST00000559151 MARSP56192 900 aaKnown RBP18.85■□□□□ 0.61
CASC4-208ENST00000559151 WDR4P57081 412 aaKnown RBP18.85■□□□□ 0.61
CASC4-208ENST00000559151 Q6ZVU0 165 aa18.85■□□□□ 0.61
CASC4-208ENST00000559151 AGBL1Q96MI9 1066 aa18.85■□□□□ 0.61
CASC4-208ENST00000559151 ESYT1Q9BSJ8 1104 aa18.85■□□□□ 0.61
CASC4-208ENST00000559151 HRH3Q9Y5N1 445 aa18.85■□□□□ 0.61
CASC4-208ENST00000559151 TNFRSF10AO00220 468 aa18.84■□□□□ 0.61
CASC4-208ENST00000559151 FKBP4Q02790 459 aaKnown RBP eCLIP18.83■□□□□ 0.6
CASC4-208ENST00000559151 NOM1Q5C9Z4 860 aaKnown RBP18.83■□□□□ 0.6
CASC4-208ENST00000559151 CYP4X1Q8N118 509 aa18.83■□□□□ 0.6
CASC4-208ENST00000559151 CLN3Q13286 438 aa18.82■□□□□ 0.6
CASC4-208ENST00000559151 SF3B2Q13435 895 aaKnown RBP18.82■□□□□ 0.6
CASC4-208ENST00000559151 ECM1Q16610 540 aa18.82■□□□□ 0.6
CASC4-208ENST00000559151 HELQQ8TDG4 1101 aa18.82■□□□□ 0.6
CASC4-208ENST00000559151 AMOTL2Q9Y2J4 779 aa18.82■□□□□ 0.6
CASC4-208ENST00000559151 TIMP2P16035 220 aa18.81■□□□□ 0.6
CASC4-208ENST00000559151 PTGIRP43119 386 aa18.81■□□□□ 0.6
CASC4-208ENST00000559151 C2orf49Q9BVC5 232 aaPredicted RBP18.81■□□□□ 0.6
CASC4-208ENST00000559151 IQSEC3Q9UPP2 1182 aaPredicted RBP18.8■□□□□ 0.6
CASC4-208ENST00000559151 CDK2AP1O14519 115 aa18.79■□□□□ 0.6
CASC4-208ENST00000559151 PSMA6P60900 246 aaKnown RBP18.79■□□□□ 0.6
CASC4-208ENST00000559151 RELBQ01201 579 aa18.79■□□□□ 0.6
CASC4-208ENST00000559151 SAP130Q9H0E3 1048 aa18.79■□□□□ 0.6
CASC4-208ENST00000559151 TOR4AQ9NXH8 423 aa18.79■□□□□ 0.6
CASC4-208ENST00000559151 MEN1O00255 615 aa18.78■□□□□ 0.6
CASC4-208ENST00000559151 STAG2Q8N3U4 1231 aa18.78■□□□□ 0.6
CASC4-208ENST00000559151 FHDC1Q9C0D6 1143 aaPredicted RBP18.78■□□□□ 0.6
CASC4-208ENST00000559151 SMPD1P17405 629 aa18.77■□□□□ 0.6
CASC4-208ENST00000559151 CENPCQ03188 943 aa18.76■□□□□ 0.59
CASC4-208ENST00000559151 C16orf46Q6P387 395 aa18.76■□□□□ 0.59
CASC4-208ENST00000559151 ARHGAP4P98171 946 aa18.75■□□□□ 0.59
CASC4-208ENST00000559151 ZNF395Q9H8N7 513 aaPredicted RBP18.75■□□□□ 0.59
CASC4-208ENST00000559151 NLRP3Q96P20 1036 aa18.74■□□□□ 0.59
CASC4-208ENST00000559151 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.74■□□□□ 0.59
CASC4-208ENST00000559151 ERCC3P19447 782 aa18.73■□□□□ 0.59
CASC4-208ENST00000559151 TRIM67Q6ZTA4 783 aa18.73■□□□□ 0.59
CASC4-208ENST00000559151 NBPF15Q8N660 670 aa18.73■□□□□ 0.59
CASC4-208ENST00000559151 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
CASC4-208ENST00000559151 MAPK1P28482 360 aa18.72■□□□□ 0.59
CASC4-208ENST00000559151 SH3PXD2AQ5TCZ1 1133 aa18.72■□□□□ 0.59
CASC4-208ENST00000559151 QTRT2Q9H974 415 aaKnown RBP18.72■□□□□ 0.59
CASC4-208ENST00000559151 MPSTP25325 297 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms