RNA–Protein interactions for RNA: ENST00000559065.1

AC048382.4-201, humanhuman

TSL 4 BASIC

Gene AC048382.4, Length 546 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048382.4-201ENST00000559065 U2AF1Q01081 240 aaKnown RBP eCLIP17.08■□□□□ 0.32
AC048382.4-201ENST00000559065 MTHFSDQ2M296 383 aaKnown RBP17.08■□□□□ 0.32
AC048382.4-201ENST00000559065 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
AC048382.4-201ENST00000559065 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
AC048382.4-201ENST00000559065 RALBP1Q15311 655 aa17.07■□□□□ 0.32
AC048382.4-201ENST00000559065 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
AC048382.4-201ENST00000559065 QSER1Q2KHR3 1735 aa17.07■□□□□ 0.32
AC048382.4-201ENST00000559065 NEFMP07197 916 aa17.06■□□□□ 0.32
AC048382.4-201ENST00000559065 PTGER2P43116 358 aa17.06■□□□□ 0.32
AC048382.4-201ENST00000559065 SLC52A2Q9HAB3 445 aa17.06■□□□□ 0.32
AC048382.4-201ENST00000559065 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
AC048382.4-201ENST00000559065 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
AC048382.4-201ENST00000559065 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
AC048382.4-201ENST00000559065 MAP3K5Q99683 1374 aa17.04■□□□□ 0.32
AC048382.4-201ENST00000559065 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
AC048382.4-201ENST00000559065 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
AC048382.4-201ENST00000559065 ARXQ96QS3 562 aa17.04■□□□□ 0.32
AC048382.4-201ENST00000559065 GNPATO15228 680 aa17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 FCHSD2O94868 740 aa17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 PHF14O94880 888 aa17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 SSFA2P28290 1259 aa17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 COL23A1Q86Y22 540 aaPredicted RBP17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
AC048382.4-201ENST00000559065 TEFQ10587 303 aa17.02■□□□□ 0.32
AC048382.4-201ENST00000559065 ITPK1Q13572 414 aa17.02■□□□□ 0.32
AC048382.4-201ENST00000559065 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
AC048382.4-201ENST00000559065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
AC048382.4-201ENST00000559065 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
AC048382.4-201ENST00000559065 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
AC048382.4-201ENST00000559065 TAF1LQ8IZX4 1826 aa17■□□□□ 0.31
AC048382.4-201ENST00000559065 MRC1P22897 1456 aa17■□□□□ 0.31
AC048382.4-201ENST00000559065 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
AC048382.4-201ENST00000559065 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
AC048382.4-201ENST00000559065 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
AC048382.4-201ENST00000559065 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
AC048382.4-201ENST00000559065 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
AC048382.4-201ENST00000559065 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
AC048382.4-201ENST00000559065 RC3H1Q5TC82 1133 aaKnown RBP16.99■□□□□ 0.31
AC048382.4-201ENST00000559065 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
AC048382.4-201ENST00000559065 CNTNAP4Q9C0A0 1308 aa16.98■□□□□ 0.31
AC048382.4-201ENST00000559065 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
AC048382.4-201ENST00000559065 PHACTR3Q96KR7 559 aa16.98■□□□□ 0.31
AC048382.4-201ENST00000559065 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
AC048382.4-201ENST00000559065 ADRA2BP18089 450 aa16.97■□□□□ 0.31
AC048382.4-201ENST00000559065 TRAPPC3LQ5T215 181 aa16.97■□□□□ 0.31
AC048382.4-201ENST00000559065 MSL1Q68DK7 614 aa16.97■□□□□ 0.31
AC048382.4-201ENST00000559065 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
AC048382.4-201ENST00000559065 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
AC048382.4-201ENST00000559065 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
AC048382.4-201ENST00000559065 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
AC048382.4-201ENST00000559065 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 RFC4P35249 363 aa16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 IL17REQ8NFR9 667 aa16.94■□□□□ 0.3
AC048382.4-201ENST00000559065 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
AC048382.4-201ENST00000559065 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
AC048382.4-201ENST00000559065 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
AC048382.4-201ENST00000559065 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
AC048382.4-201ENST00000559065 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
AC048382.4-201ENST00000559065 DNAJC10Q8IXB1 793 aa16.92■□□□□ 0.3
AC048382.4-201ENST00000559065 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 STARD3NLO95772 234 aa16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 SMIM5Q71RC9 77 aa16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 TEX13AQ9BXU3 409 aaPredicted RBP16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 KCPQ6ZWJ8 1503 aa16.91■□□□□ 0.3
AC048382.4-201ENST00000559065 COL24A1Q17RW2 1714 aa16.9■□□□□ 0.3
AC048382.4-201ENST00000559065 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
AC048382.4-201ENST00000559065 MCM10Q7L590 875 aa16.9■□□□□ 0.3
AC048382.4-201ENST00000559065 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
AC048382.4-201ENST00000559065 ARHGEF1Q92888 912 aaKnown RBP16.9■□□□□ 0.3
AC048382.4-201ENST00000559065 FMNL2Q96PY5 1086 aa16.9■□□□□ 0.3
AC048382.4-201ENST00000559065 NPM2Q86SE8 214 aaKnown RBP16.89■□□□□ 0.29
AC048382.4-201ENST00000559065 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
AC048382.4-201ENST00000559065 TJP1Q07157 1748 aa16.88■□□□□ 0.29
AC048382.4-201ENST00000559065 CYP19A1P11511 503 aaPredicted RBP16.88■□□□□ 0.29
AC048382.4-201ENST00000559065 NFE2L2Q16236 605 aa16.88■□□□□ 0.29
AC048382.4-201ENST00000559065 CD2APQ9Y5K6 639 aa16.88■□□□□ 0.29
AC048382.4-201ENST00000559065 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
AC048382.4-201ENST00000559065 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
AC048382.4-201ENST00000559065 ZNF316A6NFI3 1004 aaPredicted RBP16.87■□□□□ 0.29
AC048382.4-201ENST00000559065 ZPR1O75312 459 aa16.87■□□□□ 0.29
AC048382.4-201ENST00000559065 GPR162Q16538 588 aa16.87■□□□□ 0.29
AC048382.4-201ENST00000559065 INTS5Q6P9B9 1019 aaKnown RBP16.87■□□□□ 0.29
AC048382.4-201ENST00000559065 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
AC048382.4-201ENST00000559065 PLEKHF1Q96S99 279 aa16.87■□□□□ 0.29
AC048382.4-201ENST00000559065 MMP10P09238 476 aa16.86■□□□□ 0.29
AC048382.4-201ENST00000559065 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
AC048382.4-201ENST00000559065 DCTN1Q14203 1278 aa16.86■□□□□ 0.29
AC048382.4-201ENST00000559065 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
AC048382.4-201ENST00000559065 PNISRQ8TF01 805 aaKnown RBP16.86■□□□□ 0.29
AC048382.4-201ENST00000559065 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
AC048382.4-201ENST00000559065 PARP3Q9Y6F1 533 aa16.85■□□□□ 0.29
AC048382.4-201ENST00000559065 SOS1Q07889 1333 aaPredicted RBP16.85■□□□□ 0.29
AC048382.4-201ENST00000559065 USP42Q9H9J4 1324 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms