RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 NNTQ13423 1086 aa9.81□□□□□ -0.84
LRRC28-209ENST00000558861 CC2D2BQ6DHV5 1058 aa9.81□□□□□ -0.84
LRRC28-209ENST00000558861 TRIM67Q6ZTA4 783 aa9.81□□□□□ -0.84
LRRC28-209ENST00000558861 ANKMY2Q8IV38 441 aa9.81□□□□□ -0.84
LRRC28-209ENST00000558861 SIRT1Q96EB6 747 aa9.81□□□□□ -0.84
LRRC28-209ENST00000558861 WASF2Q9Y6W5 498 aa9.81□□□□□ -0.84
LRRC28-209ENST00000558861 J3QL48 77 aa9.8□□□□□ -0.84
LRRC28-209ENST00000558861 ZBTB7BO15156 539 aaPredicted RBP9.8□□□□□ -0.84
LRRC28-209ENST00000558861 LILRA1O75019 489 aa9.8□□□□□ -0.84
LRRC28-209ENST00000558861 DPYDQ12882 1025 aa9.8□□□□□ -0.84
LRRC28-209ENST00000558861 KIAA0586Q9BVV6 1533 aa9.8□□□□□ -0.84
LRRC28-209ENST00000558861 TTC24A2A3L6 582 aaPredicted RBP9.79□□□□□ -0.84
LRRC28-209ENST00000558861 DKK1O94907 266 aa9.79□□□□□ -0.84
LRRC28-209ENST00000558861 CYP4X1Q8N118 509 aa9.79□□□□□ -0.84
LRRC28-209ENST00000558861 SIX5Q8N196 739 aa9.79□□□□□ -0.84
LRRC28-209ENST00000558861 LARGE2Q8N3Y3 721 aa9.79□□□□□ -0.84
LRRC28-209ENST00000558861 TPCN2Q8NHX9 752 aa9.79□□□□□ -0.84
LRRC28-209ENST00000558861 OSBPL3Q9H4L5 887 aa9.79□□□□□ -0.84
LRRC28-209ENST00000558861 STAU1O95793 577 aaKnown RBP9.78□□□□□ -0.84
LRRC28-209ENST00000558861 CCDC102BQ68D86 513 aa9.78□□□□□ -0.84
LRRC28-209ENST00000558861 FAM9AQ8IZU1 332 aaPredicted RBP9.78□□□□□ -0.84
LRRC28-209ENST00000558861 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
LRRC28-209ENST00000558861 TOR4AQ9NXH8 423 aa9.78□□□□□ -0.84
LRRC28-209ENST00000558861 KIF21BO75037 1637 aa9.78□□□□□ -0.84
LRRC28-209ENST00000558861 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
LRRC28-209ENST00000558861 MYT1Q01538 1121 aa9.77□□□□□ -0.85
LRRC28-209ENST00000558861 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
LRRC28-209ENST00000558861 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
LRRC28-209ENST00000558861 EMILIN1Q9Y6C2 1016 aa9.77□□□□□ -0.85
LRRC28-209ENST00000558861 SMPD1P17405 629 aa9.76□□□□□ -0.85
LRRC28-209ENST00000558861 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
LRRC28-209ENST00000558861 SFI1A8K8P3 1242 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 ADD1P35611 737 aaKnown RBP9.75□□□□□ -0.85
LRRC28-209ENST00000558861 PRR20EP86478 221 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 PRR20CP86479 221 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 PRR20DP86480 221 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 PRR20BP86481 221 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 PRR20AP86496 221 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 PDE4CQ08493 712 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 FAM69CQ0P6D2 419 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 ITPKCQ96DU7 683 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 ERCC6L2Q5T890 1561 aa9.75□□□□□ -0.85
LRRC28-209ENST00000558861 TRIM26Q12899 539 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-209ENST00000558861 CBLBQ13191 982 aa9.74□□□□□ -0.85
LRRC28-209ENST00000558861 KLF16Q9BXK1 252 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-209ENST00000558861 ZFAND3Q9H8U3 227 aa9.74□□□□□ -0.85
LRRC28-209ENST00000558861 SLAIN2Q9P270 581 aa9.74□□□□□ -0.85
LRRC28-209ENST00000558861 ZIC2O95409 532 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-209ENST00000558861 SCNN1DP51172 638 aa9.73□□□□□ -0.85
LRRC28-209ENST00000558861 SEC13P55735 322 aa9.73□□□□□ -0.85
LRRC28-209ENST00000558861 WDR4P57081 412 aaKnown RBP9.73□□□□□ -0.85
LRRC28-209ENST00000558861 CYP2U1Q7Z449 544 aa9.73□□□□□ -0.85
LRRC28-209ENST00000558861 RBM19Q9Y4C8 960 aaKnown RBP9.73□□□□□ -0.85
LRRC28-209ENST00000558861 UGGT2Q9NYU1 1516 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 IQGAP2Q13576 1575 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 TMEM229AB2RXF0 380 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 LGR5O75473 907 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 TIMP2P16035 220 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 AEBP1Q8IUX7 1158 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.72□□□□□ -0.85
LRRC28-209ENST00000558861 ZNF358Q9NW07 568 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 GOLGA3Q08378 1498 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
LRRC28-209ENST00000558861 RIMBP3CA6NJZ7 1639 aa9.71□□□□□ -0.85
LRRC28-209ENST00000558861 RIMBP3BA6NNM3 1639 aa9.71□□□□□ -0.85
LRRC28-209ENST00000558861 RIMBP3Q9UFD9 1639 aa9.71□□□□□ -0.85
LRRC28-209ENST00000558861 GDF10P55107 478 aa9.71□□□□□ -0.86
LRRC28-209ENST00000558861 TSEN2Q8NCE0 465 aaKnown RBP9.71□□□□□ -0.86
LRRC28-209ENST00000558861 HPS1Q92902 700 aa9.71□□□□□ -0.86
LRRC28-209ENST00000558861 ETNK1Q9HBU6 452 aa9.71□□□□□ -0.86
LRRC28-209ENST00000558861 RAB6BQ9NRW1 208 aa9.71□□□□□ -0.86
LRRC28-209ENST00000558861 PRG4Q92954 1404 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-209ENST00000558861 DISP1Q96F81 1524 aa9.71□□□□□ -0.86
LRRC28-209ENST00000558861 ADH1AP07327 375 aa9.7□□□□□ -0.86
LRRC28-209ENST00000558861 TRIM52Q96A61 297 aa9.7□□□□□ -0.86
LRRC28-209ENST00000558861 ARHGEF10LQ9HCE6 1279 aa9.7□□□□□ -0.86
LRRC28-209ENST00000558861 SWI5Q1ZZU3 235 aa9.69□□□□□ -0.86
LRRC28-209ENST00000558861 KCTD17Q8N5Z5 321 aa9.69□□□□□ -0.86
LRRC28-209ENST00000558861 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
LRRC28-209ENST00000558861 CLP1Q92989 425 aaKnown RBP9.69□□□□□ -0.86
LRRC28-209ENST00000558861 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
LRRC28-209ENST00000558861 RGS20O76081 388 aa9.68□□□□□ -0.86
LRRC28-209ENST00000558861 BRD1O95696 1058 aa9.68□□□□□ -0.86
LRRC28-209ENST00000558861 GNRH1P01148 92 aa9.68□□□□□ -0.86
LRRC28-209ENST00000558861 Q6ZVU0 165 aa9.68□□□□□ -0.86
LRRC28-209ENST00000558861 AGBL1Q96MI9 1066 aa9.68□□□□□ -0.86
LRRC28-209ENST00000558861 SERTAD1Q9UHV2 236 aa9.68□□□□□ -0.86
LRRC28-209ENST00000558861 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-209ENST00000558861 PRMT3O60678 531 aa9.67□□□□□ -0.86
LRRC28-209ENST00000558861 INHAP05111 366 aa9.67□□□□□ -0.86
LRRC28-209ENST00000558861 PHLDB3Q6NSJ2 640 aa9.67□□□□□ -0.86
LRRC28-209ENST00000558861 HINFPQ9BQA5 517 aa9.67□□□□□ -0.86
LRRC28-209ENST00000558861 CTTNBP2Q8WZ74 1663 aa9.67□□□□□ -0.86
LRRC28-209ENST00000558861 ATP2B4P23634 1241 aa9.66□□□□□ -0.86
LRRC28-209ENST00000558861 PRIMPOLQ96LW4 560 aa9.66□□□□□ -0.86
LRRC28-209ENST00000558861 TNIKQ9UKE5 1360 aa9.65□□□□□ -0.86
LRRC28-209ENST00000558861 M0R2N6 131 aa9.65□□□□□ -0.86
LRRC28-209ENST00000558861 IL2RAP01589 272 aa9.65□□□□□ -0.86
LRRC28-209ENST00000558861 RELBQ01201 579 aa9.65□□□□□ -0.86
LRRC28-209ENST00000558861 TNS4Q8IZW8 715 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms