RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PER1O15534 1290 aaPredicted RBP18.57■□□□□ 0.56
VPS18-203ENST00000558855 PHF14O94880 888 aa18.57■□□□□ 0.56
VPS18-203ENST00000558855 POLD1P28340 1107 aa18.57■□□□□ 0.56
VPS18-203ENST00000558855 IL13P35225 146 aa18.57■□□□□ 0.56
VPS18-203ENST00000558855 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
VPS18-203ENST00000558855 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
VPS18-203ENST00000558855 ZNF530Q6P9A1 599 aaPredicted RBP18.56■□□□□ 0.56
VPS18-203ENST00000558855 COL3A1P02461 1466 aaPredicted RBP18.56■□□□□ 0.56
VPS18-203ENST00000558855 ADAMTS7Q9UKP4 1686 aa18.56■□□□□ 0.56
VPS18-203ENST00000558855 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.55■□□□□ 0.56
VPS18-203ENST00000558855 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
VPS18-203ENST00000558855 AK7Q96M32 723 aa18.55■□□□□ 0.56
VPS18-203ENST00000558855 KIF13BQ9NQT8 1826 aa18.54■□□□□ 0.56
VPS18-203ENST00000558855 YBX3P16989 372 aaKnown RBP eCLIP18.54■□□□□ 0.56
VPS18-203ENST00000558855 SULT6B1Q6IMI4 303 aa18.54■□□□□ 0.56
VPS18-203ENST00000558855 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
VPS18-203ENST00000558855 ATP6V1AP38606 617 aa18.52■□□□□ 0.56
VPS18-203ENST00000558855 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
VPS18-203ENST00000558855 N4BP2Q86UW6 1770 aaPredicted RBP18.52■□□□□ 0.55
VPS18-203ENST00000558855 GNPATO15228 680 aa18.51■□□□□ 0.55
VPS18-203ENST00000558855 MTHFSP49914 203 aa18.51■□□□□ 0.55
VPS18-203ENST00000558855 GPR162Q16538 588 aa18.51■□□□□ 0.55
VPS18-203ENST00000558855 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
VPS18-203ENST00000558855 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
VPS18-203ENST00000558855 DCAF5Q96JK2 942 aa18.51■□□□□ 0.55
VPS18-203ENST00000558855 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
VPS18-203ENST00000558855 MRC1P22897 1456 aa18.5■□□□□ 0.55
VPS18-203ENST00000558855 SSFA2P28290 1259 aa18.49■□□□□ 0.55
VPS18-203ENST00000558855 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
VPS18-203ENST00000558855 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
VPS18-203ENST00000558855 RBM42Q9BTD8 480 aaKnown RBP18.49■□□□□ 0.55
VPS18-203ENST00000558855 UBR2Q8IWV8 1755 aa18.49■□□□□ 0.55
VPS18-203ENST00000558855 SIPA1L3O60292 1781 aaPredicted RBP18.48■□□□□ 0.55
VPS18-203ENST00000558855 HMOX1P09601 288 aa18.48■□□□□ 0.55
VPS18-203ENST00000558855 AMOTQ4VCS5 1084 aa18.47■□□□□ 0.55
VPS18-203ENST00000558855 WWC3Q9ULE0 1092 aa18.47■□□□□ 0.55
VPS18-203ENST00000558855 BRCA1P38398 1863 aaKnown RBP18.47■□□□□ 0.55
VPS18-203ENST00000558855 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
VPS18-203ENST00000558855 CABP4P57796 275 aa18.46■□□□□ 0.55
VPS18-203ENST00000558855 NFATC2IPQ8NCF5 419 aa18.46■□□□□ 0.55
VPS18-203ENST00000558855 LGR6Q9HBX8 967 aa18.46■□□□□ 0.55
VPS18-203ENST00000558855 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
VPS18-203ENST00000558855 PTCD1O75127 700 aaKnown RBP18.44■□□□□ 0.54
VPS18-203ENST00000558855 C1orf141Q5JVX7 400 aa18.44■□□□□ 0.54
VPS18-203ENST00000558855 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
VPS18-203ENST00000558855 NPC1L1Q9UHC9 1359 aa18.43■□□□□ 0.54
VPS18-203ENST00000558855 CD2APQ9Y5K6 639 aa18.43■□□□□ 0.54
VPS18-203ENST00000558855 PXDNLA1KZ92 1463 aa18.42■□□□□ 0.54
VPS18-203ENST00000558855 MTHFSDQ2M296 383 aaKnown RBP18.42■□□□□ 0.54
VPS18-203ENST00000558855 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
VPS18-203ENST00000558855 MMP10P09238 476 aa18.41■□□□□ 0.54
VPS18-203ENST00000558855 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
VPS18-203ENST00000558855 RNMTO43148 476 aaKnown RBP18.4■□□□□ 0.54
VPS18-203ENST00000558855 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
VPS18-203ENST00000558855 SLC39A6Q13433 755 aa18.4■□□□□ 0.54
VPS18-203ENST00000558855 RC3H1Q5TC82 1133 aaKnown RBP18.4■□□□□ 0.54
VPS18-203ENST00000558855 RTCBQ9Y3I0 505 aaKnown RBP18.4■□□□□ 0.54
VPS18-203ENST00000558855 C10orf71Q711Q0 1435 aa18.4■□□□□ 0.54
VPS18-203ENST00000558855 AFDNP55196 1824 aaKnown RBP18.39■□□□□ 0.54
VPS18-203ENST00000558855 RPS6KA4O75676 772 aa18.39■□□□□ 0.53
VPS18-203ENST00000558855 GYS1P13807 737 aa18.39■□□□□ 0.53
VPS18-203ENST00000558855 CRKLP46109 303 aaKnown RBP18.39■□□□□ 0.53
VPS18-203ENST00000558855 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
VPS18-203ENST00000558855 SRP68Q9UHB9 627 aaKnown RBP18.39■□□□□ 0.53
VPS18-203ENST00000558855 INTS5Q6P9B9 1019 aaKnown RBP18.38■□□□□ 0.53
VPS18-203ENST00000558855 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
VPS18-203ENST00000558855 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
VPS18-203ENST00000558855 ADCY9O60503 1353 aa18.36■□□□□ 0.53
VPS18-203ENST00000558855 HMGB2P26583 209 aaKnown RBP18.35■□□□□ 0.53
VPS18-203ENST00000558855 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
VPS18-203ENST00000558855 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
VPS18-203ENST00000558855 ATP10DQ9P241 1426 aa18.34■□□□□ 0.53
VPS18-203ENST00000558855 USP42Q9H9J4 1324 aaKnown RBP18.33■□□□□ 0.53
VPS18-203ENST00000558855 U2SURPO15042 1029 aaKnown RBP18.33■□□□□ 0.52
VPS18-203ENST00000558855 GRIN3BO60391 1043 aa18.33■□□□□ 0.52
VPS18-203ENST00000558855 ADRA2BP18089 450 aa18.33■□□□□ 0.52
VPS18-203ENST00000558855 DDR1Q08345 913 aa18.33■□□□□ 0.52
VPS18-203ENST00000558855 FKBP8Q14318 412 aa18.33■□□□□ 0.52
VPS18-203ENST00000558855 DLG5Q8TDM6 1919 aa18.33■□□□□ 0.52
VPS18-203ENST00000558855 SCN7AQ01118 1682 aa18.32■□□□□ 0.52
VPS18-203ENST00000558855 CYP19A1P11511 503 aaPredicted RBP18.32■□□□□ 0.52
VPS18-203ENST00000558855 RFC4P35249 363 aa18.32■□□□□ 0.52
VPS18-203ENST00000558855 IL17REQ8NFR9 667 aa18.32■□□□□ 0.52
VPS18-203ENST00000558855 SOS1Q07889 1333 aaPredicted RBP18.31■□□□□ 0.52
VPS18-203ENST00000558855 A0A0G2JLW4 131 aa18.31■□□□□ 0.52
VPS18-203ENST00000558855 NLGN1Q8N2Q7 840 aa18.31■□□□□ 0.52
VPS18-203ENST00000558855 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
VPS18-203ENST00000558855 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
VPS18-203ENST00000558855 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
VPS18-203ENST00000558855 CCDC87Q9NVE4 849 aa18.3■□□□□ 0.52
VPS18-203ENST00000558855 ANKRD31Q8N7Z5 1873 aa18.29■□□□□ 0.52
VPS18-203ENST00000558855 PPP2R1AP30153 589 aa18.29■□□□□ 0.52
VPS18-203ENST00000558855 C1QTNF8P60827 252 aa18.29■□□□□ 0.52
VPS18-203ENST00000558855 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
VPS18-203ENST00000558855 BCORQ6W2J9 1755 aa18.28■□□□□ 0.52
VPS18-203ENST00000558855 DPEP1P16444 411 aa18.28■□□□□ 0.52
VPS18-203ENST00000558855 KCNA3P22001 575 aa18.28■□□□□ 0.52
VPS18-203ENST00000558855 BCL2L12Q9HB09 334 aa18.28■□□□□ 0.52
VPS18-203ENST00000558855 COL15A1P39059 1388 aa18.28■□□□□ 0.52
VPS18-203ENST00000558855 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms