RNA–Protein interactions for RNA: ENST00000558808.5

LRRC49-213, Transcript of leucine rich repeat containing 49, humanhuman

TSL 3

Gene LRRC49, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-213ENST00000558808 CDC14CA4D256 554 aa6.56□□□□□ -1.36
LRRC49-213ENST00000558808 TMEM229AB2RXF0 380 aa6.56□□□□□ -1.36
LRRC49-213ENST00000558808 GNASQ5JWF2 1037 aa6.56□□□□□ -1.36
LRRC49-213ENST00000558808 VWA5B2Q8N398 1253 aa6.56□□□□□ -1.36
LRRC49-213ENST00000558808 TIMMDC1Q9NPL8 285 aa6.56□□□□□ -1.36
LRRC49-213ENST00000558808 CUEDC1Q9NWM3 386 aaPredicted RBP6.56□□□□□ -1.36
LRRC49-213ENST00000558808 GTF2E1P29083 439 aaPredicted RBP6.55□□□□□ -1.36
LRRC49-213ENST00000558808 C4orf17Q53FE4 359 aa6.55□□□□□ -1.36
LRRC49-213ENST00000558808 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
LRRC49-213ENST00000558808 SV2AQ7L0J3 742 aa6.55□□□□□ -1.36
LRRC49-213ENST00000558808 RHBDD1Q8TEB9 315 aa6.55□□□□□ -1.36
LRRC49-213ENST00000558808 CALR3Q96L12 384 aaKnown RBP6.55□□□□□ -1.36
LRRC49-213ENST00000558808 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
LRRC49-213ENST00000558808 SMTNP53814 917 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 KRT76Q01546 638 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 PSME1Q06323 249 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 TRIM50Q86XT4 487 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 PPARGC1BQ86YN6 1023 aaKnown RBP6.54□□□□□ -1.36
LRRC49-213ENST00000558808 TRIM22Q8IYM9 498 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 ZNF837Q96EG3 531 aaPredicted RBP6.54□□□□□ -1.36
LRRC49-213ENST00000558808 GMCL1Q96IK5 515 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 SLC4A9Q96Q91 983 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 GAS2L1Q99501 681 aaPredicted RBP6.54□□□□□ -1.36
LRRC49-213ENST00000558808 SERTAD1Q9UHV2 236 aa6.54□□□□□ -1.36
LRRC49-213ENST00000558808 A0A1B0GTH6 734 aa6.53□□□□□ -1.36
LRRC49-213ENST00000558808 PHKA2P46019 1235 aa6.53□□□□□ -1.36
LRRC49-213ENST00000558808 RIPOR1Q6ZS17 1223 aa6.53□□□□□ -1.36
LRRC49-213ENST00000558808 COL25A1Q9BXS0 654 aaPredicted RBP6.53□□□□□ -1.36
LRRC49-213ENST00000558808 TFIP11Q9UBB9 837 aaKnown RBP6.53□□□□□ -1.36
LRRC49-213ENST00000558808 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
LRRC49-213ENST00000558808 MAFBQ9Y5Q3 323 aaPredicted RBP6.53□□□□□ -1.36
LRRC49-213ENST00000558808 PALM3A6NDB9 673 aaPredicted RBP6.52□□□□□ -1.37
LRRC49-213ENST00000558808 A6NJY4 79 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 H7C1W4 665 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 BACH1O14867 736 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 F11P03951 625 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 ATP1A2P50993 1020 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 CLDN10P78369 228 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 MTFR1Q15390 333 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 DBN1Q16643 649 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 RNFT1Q5M7Z0 435 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 PPP1R12CQ9BZL4 782 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 ZNF358Q9NW07 568 aa6.52□□□□□ -1.37
LRRC49-213ENST00000558808 MKRN1Q9UHC7 482 aaKnown RBP6.52□□□□□ -1.37
LRRC49-213ENST00000558808 IQSEC3Q9UPP2 1182 aaPredicted RBP6.52□□□□□ -1.37
LRRC49-213ENST00000558808 PLA2G4AP47712 749 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 ZNF295-AS1Q8N0V1 137 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
LRRC49-213ENST00000558808 TPCN2Q8NHX9 752 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 CNTNAP3BQ96NU0 1288 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 CNTNAP3Q9BZ76 1288 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 GPAMQ9HCL2 828 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 DNAAF2Q9NVR5 837 aaKnown RBP6.51□□□□□ -1.37
LRRC49-213ENST00000558808 ZNF777Q9ULD5 760 aaPredicted RBP6.51□□□□□ -1.37
LRRC49-213ENST00000558808 USP3Q9Y6I4 520 aa6.51□□□□□ -1.37
LRRC49-213ENST00000558808 FAM181BA6NEQ2 426 aa6.5□□□□□ -1.37
LRRC49-213ENST00000558808 CDK2AP1O14519 115 aa6.5□□□□□ -1.37
LRRC49-213ENST00000558808 ZBTB7BO15156 539 aaPredicted RBP6.5□□□□□ -1.37
LRRC49-213ENST00000558808 CCDC102BQ68D86 513 aa6.5□□□□□ -1.37
LRRC49-213ENST00000558808 LARGE2Q8N3Y3 721 aa6.5□□□□□ -1.37
LRRC49-213ENST00000558808 OGFOD1Q8N543 542 aa6.5□□□□□ -1.37
LRRC49-213ENST00000558808 NIFKQ9BYG3 293 aaKnown RBP6.5□□□□□ -1.37
LRRC49-213ENST00000558808 NUCKS1Q9H1E3 243 aaKnown RBP6.5□□□□□ -1.37
LRRC49-213ENST00000558808 GTF3C3Q9Y5Q9 886 aa6.5□□□□□ -1.37
LRRC49-213ENST00000558808 THBS1P07996 1170 aa6.49□□□□□ -1.37
LRRC49-213ENST00000558808 MSX1P28360 303 aa6.49□□□□□ -1.37
LRRC49-213ENST00000558808 EPHA4P54764 986 aa6.49□□□□□ -1.37
LRRC49-213ENST00000558808 GAS6Q14393 721 aa6.49□□□□□ -1.37
LRRC49-213ENST00000558808 SIX5Q8N196 739 aa6.49□□□□□ -1.37
LRRC49-213ENST00000558808 GTPBP3Q969Y2 492 aaKnown RBP6.49□□□□□ -1.37
LRRC49-213ENST00000558808 SCHIP1Q9P0W5 487 aaPredicted RBP6.49□□□□□ -1.37
LRRC49-213ENST00000558808 GPR25O00155 361 aa6.48□□□□□ -1.37
LRRC49-213ENST00000558808 FOXK2Q01167 660 aa6.48□□□□□ -1.37
LRRC49-213ENST00000558808 FOXR1Q6PIV2 292 aa6.48□□□□□ -1.37
LRRC49-213ENST00000558808 ZNF594Q96JF6 807 aaPredicted RBP6.48□□□□□ -1.37
LRRC49-213ENST00000558808 ZMYND15Q9H091 742 aa6.48□□□□□ -1.37
LRRC49-213ENST00000558808 RUBCNLQ9H714 662 aa6.48□□□□□ -1.37
LRRC49-213ENST00000558808 LOC100996750A0A140TA64 210 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 DKK1O94907 266 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 CSB-PGBD3P0DP91 1061 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 ATP4AP20648 1035 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 RASA1P20936 1047 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 LMOD1P29536 600 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-213ENST00000558808 LBRQ14739 615 aaKnown RBP6.47□□□□□ -1.37
LRRC49-213ENST00000558808 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 KANK4Q5T7N3 995 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-213ENST00000558808 SLC9A9Q8IVB4 645 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 TNS4Q8IZW8 715 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 PGBD3Q8N328 593 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 C1orf216Q8TAB5 229 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 TRERF1Q96PN7 1200 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 KRTAP4-6Q9BYQ5 205 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 CABP1Q9NZU7 370 aa6.47□□□□□ -1.37
LRRC49-213ENST00000558808 M0R2N6 131 aa6.46□□□□□ -1.38
LRRC49-213ENST00000558808 SLURP2P0DP57 97 aa6.46□□□□□ -1.38
LRRC49-213ENST00000558808 UBAP2LQ14157 1087 aaKnown RBP6.46□□□□□ -1.38
LRRC49-213ENST00000558808 NBPF1Q3BBV0 1214 aa6.46□□□□□ -1.38
LRRC49-213ENST00000558808 CRISPLD1Q9H336 500 aa6.46□□□□□ -1.38
LRRC49-213ENST00000558808 SFI1A8K8P3 1242 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms