RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 MYO3AQ8NEV4 1616 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L15C9J2P7 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L10C9JJH3 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L13C9JLJ4 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L12C9JPN9 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L11C9JVI0 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L21D6R901 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L18D6R9N7 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L22D6RA61 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L17D6RBQ6 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L19D6RCP7 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L20D6RJB6 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 FMNL1O95466 1100 aaPredicted RBP14.71□□□□□ -0.05
MARK3-213ENST00000558611 USP17L24Q0WX57 530 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 GGT6Q6P531 493 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 PPARGC1BQ86YN6 1023 aaKnown RBP14.71□□□□□ -0.05
MARK3-213ENST00000558611 MAP10Q9P2G4 905 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 MKRN1Q9UHC7 482 aaKnown RBP14.71□□□□□ -0.05
MARK3-213ENST00000558611 ERBINQ96RT1 1412 aa14.71□□□□□ -0.05
MARK3-213ENST00000558611 PRDM15P57071 1507 aaPredicted RBP14.71□□□□□ -0.06
MARK3-213ENST00000558611 CAMSAP1Q5T5Y3 1602 aa14.7□□□□□ -0.06
MARK3-213ENST00000558611 KIF3BO15066 747 aa14.7□□□□□ -0.06
MARK3-213ENST00000558611 CEBPAP49715 358 aaPredicted RBP14.7□□□□□ -0.06
MARK3-213ENST00000558611 FAM50AQ14320 339 aaKnown RBP14.7□□□□□ -0.06
MARK3-213ENST00000558611 PHLDB3Q6NSJ2 640 aa14.7□□□□□ -0.06
MARK3-213ENST00000558611 ZNF687Q8N1G0 1237 aa14.7□□□□□ -0.06
MARK3-213ENST00000558611 GPKOWQ92917 476 aaPredicted RBP eCLIP14.7□□□□□ -0.06
MARK3-213ENST00000558611 THAP11Q96EK4 314 aa14.7□□□□□ -0.06
MARK3-213ENST00000558611 ATP5J2-PTCD1G3V325 749 aa14.69□□□□□ -0.06
MARK3-213ENST00000558611 LARP1Q6PKG0 1096 aaKnown RBP14.69□□□□□ -0.06
MARK3-213ENST00000558611 ARMC2Q8NEN0 867 aa14.69□□□□□ -0.06
MARK3-213ENST00000558611 CEP126Q9P2H0 1117 aa14.69□□□□□ -0.06
MARK3-213ENST00000558611 ANKRD30AQ9BXX3 1397 aa14.69□□□□□ -0.06
MARK3-213ENST00000558611 NPATQ14207 1427 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 NCOA1Q15788 1441 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 ABCC3O15438 1527 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 SSFA2P28290 1259 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 ARID4AP29374 1257 aaPredicted RBP14.68□□□□□ -0.06
MARK3-213ENST00000558611 PTK2Q05397 1052 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 SLFNL1Q499Z3 407 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 PDXDC2PQ6P474 469 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 SCUBE3Q8IX30 993 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 ZMYM3Q14202 1370 aa14.68□□□□□ -0.06
MARK3-213ENST00000558611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.68□□□□□ -0.06
MARK3-213ENST00000558611 NR1I2O75469 434 aa14.67□□□□□ -0.06
MARK3-213ENST00000558611 PTK7Q13308 1070 aa14.67□□□□□ -0.06
MARK3-213ENST00000558611 CRTC2Q53ET0 693 aaPredicted RBP14.67□□□□□ -0.06
MARK3-213ENST00000558611 CLP1Q92989 425 aaKnown RBP14.67□□□□□ -0.06
MARK3-213ENST00000558611 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
MARK3-213ENST00000558611 DEPDC4Q8N2C3 294 aa14.66□□□□□ -0.06
MARK3-213ENST00000558611 CDCA7Q9BWT1 371 aaPredicted RBP14.66□□□□□ -0.06
MARK3-213ENST00000558611 RRBP1Q9P2E9 1410 aaKnown RBP14.66□□□□□ -0.06
MARK3-213ENST00000558611 STRCQ7RTU9 1775 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 PZPP20742 1482 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 CTHP32929 405 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 PHTF2Q8N3S3 785 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 FAM200AQ8TCP9 573 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 CHIC2Q9UKJ5 165 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 PTPRKQ15262 1439 aa14.65□□□□□ -0.06
MARK3-213ENST00000558611 RASA1P20936 1047 aa14.64□□□□□ -0.07
MARK3-213ENST00000558611 NCOA4Q13772 614 aa14.64□□□□□ -0.07
MARK3-213ENST00000558611 RNF135Q8IUD6 432 aa14.64□□□□□ -0.07
MARK3-213ENST00000558611 VWDEQ8N2E2 1590 aa14.64□□□□□ -0.07
MARK3-213ENST00000558611 GCC2Q8IWJ2 1684 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 ERCC3P19447 782 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 PPP4CP60510 307 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 MSS51Q4VC12 460 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 PLPP7Q8NBV4 271 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 EVA1BQ9NVM1 165 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 UNC13BO14795 1591 aa14.63□□□□□ -0.07
MARK3-213ENST00000558611 CEP170BQ9Y4F5 1589 aaPredicted RBP14.63□□□□□ -0.07
MARK3-213ENST00000558611 CCNYL3P0C7X3 344 aa14.62□□□□□ -0.07
MARK3-213ENST00000558611 MAP7D1Q3KQU3 841 aa14.62□□□□□ -0.07
MARK3-213ENST00000558611 PCDHB3Q9Y5E6 796 aa14.62□□□□□ -0.07
MARK3-213ENST00000558611 WASHC2CQ9Y4E1 1318 aa14.62□□□□□ -0.07
MARK3-213ENST00000558611 ROCK1Q13464 1354 aa14.61□□□□□ -0.07
MARK3-213ENST00000558611 NBPF14Q5TI25 921 aa14.61□□□□□ -0.07
MARK3-213ENST00000558611 ANKMY2Q8IV38 441 aa14.61□□□□□ -0.07
MARK3-213ENST00000558611 SPATA31D1Q6ZQQ2 1576 aa14.6□□□□□ -0.07
MARK3-213ENST00000558611 APLP1P51693 650 aa14.6□□□□□ -0.07
MARK3-213ENST00000558611 KCNH2Q12809 1159 aa14.6□□□□□ -0.07
MARK3-213ENST00000558611 OCSTAMPQ9BR26 566 aa14.6□□□□□ -0.07
MARK3-213ENST00000558611 SLAIN2Q9P270 581 aa14.6□□□□□ -0.07
MARK3-213ENST00000558611 PCDHB9Q9Y5E1 797 aa14.6□□□□□ -0.07
MARK3-213ENST00000558611 POLR1AO95602 1720 aaPredicted RBP14.6□□□□□ -0.07
MARK3-213ENST00000558611 ANKRD50Q9ULJ7 1429 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 RBM47A0AV96 593 aaKnown RBP14.59□□□□□ -0.07
MARK3-213ENST00000558611 HSPA2P54652 639 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 SWI5Q1ZZU3 235 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 EML3Q32P44 896 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 LHX8Q68G74 356 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 ANKK1Q8NFD2 765 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 LMTK2Q8IWU2 1503 aa14.59□□□□□ -0.07
MARK3-213ENST00000558611 TET3O43151 1660 aa14.58□□□□□ -0.07
MARK3-213ENST00000558611 EFCAB6Q5THR3 1501 aa14.58□□□□□ -0.08
MARK3-213ENST00000558611 SOWAHBA6NEL2 793 aa14.58□□□□□ -0.08
MARK3-213ENST00000558611 DXOO77932 396 aaKnown RBP14.58□□□□□ -0.08
MARK3-213ENST00000558611 IQGAP3Q86VI3 1631 aa14.57□□□□□ -0.08
MARK3-213ENST00000558611 EMP3P54852 163 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms