RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 MLH3Q9UHC1 1453 aa18.62■□□□□ 0.57
AP4E1-202ENST00000558439 DNAJC2Q99543 621 aaKnown RBP18.61■□□□□ 0.57
AP4E1-202ENST00000558439 RNF20Q5VTR2 975 aa18.61■□□□□ 0.57
AP4E1-202ENST00000558439 RRAGDQ9NQL2 400 aaPredicted RBP18.61■□□□□ 0.57
AP4E1-202ENST00000558439 DNAAF4Q8WXU2 420 aa18.61■□□□□ 0.57
AP4E1-202ENST00000558439 METP08581 1390 aa18.6■□□□□ 0.57
AP4E1-202ENST00000558439 CASTP20810 708 aaKnown RBP18.6■□□□□ 0.57
AP4E1-202ENST00000558439 TSPY26PQ9H489 355 aa18.6■□□□□ 0.57
AP4E1-202ENST00000558439 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
AP4E1-202ENST00000558439 ABCC4O15439 1325 aa18.6■□□□□ 0.57
AP4E1-202ENST00000558439 WDR33Q9C0J8 1336 aaKnown RBP18.6■□□□□ 0.57
AP4E1-202ENST00000558439 KLHL40Q2TBA0 621 aa18.6■□□□□ 0.57
AP4E1-202ENST00000558439 BICD2Q8TD16 824 aa18.6■□□□□ 0.57
AP4E1-202ENST00000558439 DTNBO60941 627 aa18.59■□□□□ 0.57
AP4E1-202ENST00000558439 CCDC8Q9H0W5 538 aaPredicted RBP18.59■□□□□ 0.57
AP4E1-202ENST00000558439 LAMC1P11047 1609 aa18.59■□□□□ 0.57
AP4E1-202ENST00000558439 FERMT3Q86UX7 667 aa18.59■□□□□ 0.57
AP4E1-202ENST00000558439 PROSER2Q86WR7 435 aaPredicted RBP18.59■□□□□ 0.57
AP4E1-202ENST00000558439 PRPF40BQ6NWY9 871 aaKnown RBP18.59■□□□□ 0.57
AP4E1-202ENST00000558439 ESYT1Q9BSJ8 1104 aa18.58■□□□□ 0.57
AP4E1-202ENST00000558439 CHPF2Q9P2E5 772 aa18.58■□□□□ 0.57
AP4E1-202ENST00000558439 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.57
AP4E1-202ENST00000558439 CCDC83Q8IWF9 413 aa18.58■□□□□ 0.56
AP4E1-202ENST00000558439 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.56
AP4E1-202ENST00000558439 FBXW7Q969H0 707 aa18.58■□□□□ 0.56
AP4E1-202ENST00000558439 BOLA2Q9H3K6 86 aa18.57■□□□□ 0.56
AP4E1-202ENST00000558439 ATP8B2P98198 1209 aa18.57■□□□□ 0.56
AP4E1-202ENST00000558439 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
AP4E1-202ENST00000558439 ABCC3O15438 1527 aa18.57■□□□□ 0.56
AP4E1-202ENST00000558439 PNMA6EA0A0J9YXQ4 647 aa18.57■□□□□ 0.56
AP4E1-202ENST00000558439 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
AP4E1-202ENST00000558439 RBM10P98175 930 aaKnown RBP18.57■□□□□ 0.56
AP4E1-202ENST00000558439 ANKLE2Q86XL3 938 aa18.57■□□□□ 0.56
AP4E1-202ENST00000558439 RHPN1Q8TCX5 695 aa18.57■□□□□ 0.56
AP4E1-202ENST00000558439 LRRC59Q96AG4 307 aaKnown RBP18.57■□□□□ 0.56
AP4E1-202ENST00000558439 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.56■□□□□ 0.56
AP4E1-202ENST00000558439 VSIG10Q8N0Z9 540 aa18.56■□□□□ 0.56
AP4E1-202ENST00000558439 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
AP4E1-202ENST00000558439 LTKP29376 864 aa18.56■□□□□ 0.56
AP4E1-202ENST00000558439 PDRG1Q9NUG6 133 aa18.56■□□□□ 0.56
AP4E1-202ENST00000558439 CEBPZQ03701 1054 aaKnown RBP18.56■□□□□ 0.56
AP4E1-202ENST00000558439 ZSCAN23Q3MJ62 389 aa18.56■□□□□ 0.56
AP4E1-202ENST00000558439 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
AP4E1-202ENST00000558439 SF3A1Q15459 793 aaKnown RBP18.55■□□□□ 0.56
AP4E1-202ENST00000558439 PKP1Q13835 747 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 ZSCAN30Q86W11 494 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 MAP3K2Q9Y2U5 619 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 RAB11FIP3O75154 756 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 LARP1BQ659C4 914 aaKnown RBP18.54■□□□□ 0.56
AP4E1-202ENST00000558439 BCL11BQ9C0K0 894 aaPredicted RBP18.54■□□□□ 0.56
AP4E1-202ENST00000558439 NEO1Q92859 1461 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 KCNA6P17658 529 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 FLT4P35916 1363 aa18.54■□□□□ 0.56
AP4E1-202ENST00000558439 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
AP4E1-202ENST00000558439 CCDC39Q9UFE4 941 aa18.53■□□□□ 0.56
AP4E1-202ENST00000558439 PRR36Q9H6K5 1346 aa18.53■□□□□ 0.56
AP4E1-202ENST00000558439 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
AP4E1-202ENST00000558439 ARAP3Q8WWN8 1544 aa18.53■□□□□ 0.56
AP4E1-202ENST00000558439 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
AP4E1-202ENST00000558439 GOLGA6L6A8MZA4 724 aa18.52■□□□□ 0.56
AP4E1-202ENST00000558439 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
AP4E1-202ENST00000558439 ATF3P18847 181 aa18.52■□□□□ 0.56
AP4E1-202ENST00000558439 PSMA5P28066 241 aa18.52■□□□□ 0.56
AP4E1-202ENST00000558439 SPC24Q8NBT2 197 aa18.52■□□□□ 0.56
AP4E1-202ENST00000558439 PRIM1P49642 420 aaKnown RBP18.52■□□□□ 0.56
AP4E1-202ENST00000558439 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.56
AP4E1-202ENST00000558439 DBF4Q9UBU7 674 aaPredicted RBP18.52■□□□□ 0.56
AP4E1-202ENST00000558439 CHMLP26374 656 aa18.51■□□□□ 0.55
AP4E1-202ENST00000558439 TOMM22Q9NS69 142 aa18.51■□□□□ 0.55
AP4E1-202ENST00000558439 HOXC9P31274 260 aa18.51■□□□□ 0.55
AP4E1-202ENST00000558439 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
AP4E1-202ENST00000558439 CLASP1Q7Z460 1538 aa18.51■□□□□ 0.55
AP4E1-202ENST00000558439 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
AP4E1-202ENST00000558439 GAS2L3Q86XJ1 694 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 PIP4K2AP48426 406 aaPredicted RBP18.5■□□□□ 0.55
AP4E1-202ENST00000558439 CEP152O94986 1710 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 KDM4AO75164 1064 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 CPA1P15085 419 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 RTL1A6NKG5 1358 aa18.5■□□□□ 0.55
AP4E1-202ENST00000558439 GLI2P10070 1586 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 BECN2A8MW95 431 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 LGR6Q9HBX8 967 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 PPRC1Q5VV67 1664 aaKnown RBP18.49■□□□□ 0.55
AP4E1-202ENST00000558439 SLC39A6Q13433 755 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 GOLGA6L19H0YKK7 550 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 EVA1CP58658 441 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 WASHC4Q2M389 1173 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 CWF19L2Q2TBE0 894 aaKnown RBP18.49■□□□□ 0.55
AP4E1-202ENST00000558439 CCDC85AQ96PX6 553 aaPredicted RBP18.49■□□□□ 0.55
AP4E1-202ENST00000558439 LIMCH1Q9UPQ0 1083 aa18.49■□□□□ 0.55
AP4E1-202ENST00000558439 MYD88Q99836 296 aa18.48■□□□□ 0.55
AP4E1-202ENST00000558439 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
AP4E1-202ENST00000558439 CLCN1P35523 988 aa18.48■□□□□ 0.55
AP4E1-202ENST00000558439 KIF3AQ9Y496 699 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms