RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 RTEL1-TNFRSF6BF6WH68 1400 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 TNIP1Q15025 636 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 CCDC83Q8IWF9 413 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 KIF21BO75037 1637 aa13.19□□□□□ -0.3
INO80-205ENST00000558357 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 TOP1P11387 765 aaKnown RBP13.18□□□□□ -0.3
INO80-205ENST00000558357 MX1P20591 662 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 KIF4BQ2VIQ3 1234 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 KIAA1107Q9UPP5 1409 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 FGFR1OPO95684 399 aaKnown RBP13.18□□□□□ -0.3
INO80-205ENST00000558357 UNC13AQ9UPW8 1703 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 FERMT3Q86UX7 667 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
INO80-205ENST00000558357 CTAGE5O15320 804 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 AFAP1Q8N556 730 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 TMEM57Q8N5G2 664 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 CCDC113Q9H0I3 377 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 URI1O94763 535 aaPredicted RBP13.17□□□□□ -0.3
INO80-205ENST00000558357 GOLGA6L10A0A0M3HER8 536 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 PRPF40BQ6NWY9 871 aaKnown RBP13.17□□□□□ -0.3
INO80-205ENST00000558357 CGNQ9P2M7 1197 aaKnown RBP13.17□□□□□ -0.3
INO80-205ENST00000558357 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
INO80-205ENST00000558357 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
INO80-205ENST00000558357 ANAPC15P60006 121 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 IFFO1Q0D2I5 559 aa13.17□□□□□ -0.3
INO80-205ENST00000558357 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
INO80-205ENST00000558357 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
INO80-205ENST00000558357 MYZAPP0CAP1 466 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 TMOD2Q9NZR1 351 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 STAMBPO95630 424 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 SMC1AQ14683 1233 aaKnown RBP13.16□□□□□ -0.3
INO80-205ENST00000558357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.16□□□□□ -0.3
INO80-205ENST00000558357 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 NEMFO60524 1076 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 SLFN5Q08AF3 891 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 AEBP2Q6ZN18 517 aaPredicted RBP13.16□□□□□ -0.3
INO80-205ENST00000558357 RAB34Q9BZG1 259 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 EXOC6BQ9Y2D4 811 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 KIF20AO95235 890 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
INO80-205ENST00000558357 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
INO80-205ENST00000558357 GNAT3A8MTJ3 354 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 KLHL10Q6JEL2 608 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 C8orf76Q96K31 380 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 CCDC178Q5BJE1 867 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 SPINK5Q9NQ38 1064 aaPredicted RBP13.15□□□□□ -0.3
INO80-205ENST00000558357 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
INO80-205ENST00000558357 CCDC97Q96F63 343 aaPredicted RBP13.15□□□□□ -0.3
INO80-205ENST00000558357 ABCF2Q9UG63 623 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 FAM107BQ9H098 131 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 SLC52A1Q9NWF4 448 aa13.15□□□□□ -0.3
INO80-205ENST00000558357 YEATS4O95619 227 aa13.14□□□□□ -0.31
INO80-205ENST00000558357 PPP4R3AQ6IN85 833 aa13.14□□□□□ -0.31
INO80-205ENST00000558357 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
INO80-205ENST00000558357 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
INO80-205ENST00000558357 STARD3NLO95772 234 aa13.14□□□□□ -0.31
INO80-205ENST00000558357 RRS1Q15050 365 aaKnown RBP13.14□□□□□ -0.31
INO80-205ENST00000558357 HMGB2P26583 209 aaKnown RBP13.14□□□□□ -0.31
INO80-205ENST00000558357 TMEM266Q2M3C6 531 aa13.14□□□□□ -0.31
INO80-205ENST00000558357 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 NUP88Q99567 741 aaPredicted RBP13.13□□□□□ -0.31
INO80-205ENST00000558357 NAPBQ9H115 298 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 PLEKHH2Q8IVE3 1493 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
INO80-205ENST00000558357 GSDMDP57764 484 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 CAVIN4Q5BKX8 364 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
INO80-205ENST00000558357 HOOK3Q86VS8 718 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 PRDM11Q9NQV5 511 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 POLA1P09884 1462 aaPredicted RBP13.13□□□□□ -0.31
INO80-205ENST00000558357 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 DDX19AQ9NUU7 478 aaKnown RBP13.13□□□□□ -0.31
INO80-205ENST00000558357 CALCOCO1Q9P1Z2 691 aa13.13□□□□□ -0.31
INO80-205ENST00000558357 NBPF8Q3BBV2 869 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 DUSP27Q5VZP5 1158 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
INO80-205ENST00000558357 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
INO80-205ENST00000558357 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 RAD54L2Q9Y4B4 1467 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 TNNT1P13805 278 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 TAOK3Q9H2K8 898 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 CBX1P83916 185 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 ALS2CR12Q96Q35 445 aa13.12□□□□□ -0.31
INO80-205ENST00000558357 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms