RNA–Protein interactions for RNA: ENST00000558216.1

CHRNB4-203, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 578 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-203ENST00000558216 MSL1Q68DK7 614 aa17.91■□□□□ 0.46
CHRNB4-203ENST00000558216 CCNL1Q9UK58 526 aaPredicted RBP17.91■□□□□ 0.46
CHRNB4-203ENST00000558216 PKD1L3Q7Z443 1732 aa17.9■□□□□ 0.46
CHRNB4-203ENST00000558216 TOGARAM1Q9Y4F4 1720 aa17.9■□□□□ 0.46
CHRNB4-203ENST00000558216 PHKG2P15735 406 aa17.9■□□□□ 0.46
CHRNB4-203ENST00000558216 HMGB2P26583 209 aaKnown RBP17.9■□□□□ 0.46
CHRNB4-203ENST00000558216 PPP2R1AP30153 589 aa17.89■□□□□ 0.45
CHRNB4-203ENST00000558216 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
CHRNB4-203ENST00000558216 UBR3Q6ZT12 1888 aa17.87■□□□□ 0.45
CHRNB4-203ENST00000558216 DDX10Q13206 875 aaKnown RBP17.87■□□□□ 0.45
CHRNB4-203ENST00000558216 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
CHRNB4-203ENST00000558216 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
CHRNB4-203ENST00000558216 GPBP1L1Q9HC44 474 aaPredicted RBP17.87■□□□□ 0.45
CHRNB4-203ENST00000558216 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
CHRNB4-203ENST00000558216 ITGB4P16144 1822 aa17.86■□□□□ 0.45
CHRNB4-203ENST00000558216 HSPA6P17066 643 aa17.86■□□□□ 0.45
CHRNB4-203ENST00000558216 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
CHRNB4-203ENST00000558216 ZNF526Q8TF50 670 aaPredicted RBP17.86■□□□□ 0.45
CHRNB4-203ENST00000558216 SMARCC1Q92922 1105 aaPredicted RBP17.86■□□□□ 0.45
CHRNB4-203ENST00000558216 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
CHRNB4-203ENST00000558216 U2SURPO15042 1029 aaKnown RBP17.85■□□□□ 0.45
CHRNB4-203ENST00000558216 COL3A1P02461 1466 aaPredicted RBP17.85■□□□□ 0.45
CHRNB4-203ENST00000558216 C4BP0C0L5 1744 aa17.85■□□□□ 0.45
CHRNB4-203ENST00000558216 RALBP1Q15311 655 aa17.85■□□□□ 0.45
CHRNB4-203ENST00000558216 ERVV-2B6SEH9 535 aa17.84■□□□□ 0.45
CHRNB4-203ENST00000558216 HMOX1P09601 288 aa17.84■□□□□ 0.45
CHRNB4-203ENST00000558216 TMOD3Q9NYL9 352 aa17.84■□□□□ 0.45
CHRNB4-203ENST00000558216 CD2APQ9Y5K6 639 aa17.84■□□□□ 0.45
CHRNB4-203ENST00000558216 PIGBQ92521 554 aa17.82■□□□□ 0.44
CHRNB4-203ENST00000558216 AKAP4Q5JQC9 854 aa17.81■□□□□ 0.44
CHRNB4-203ENST00000558216 WWC3Q9ULE0 1092 aa17.81■□□□□ 0.44
CHRNB4-203ENST00000558216 PALLDQ8WX93 1383 aa17.8■□□□□ 0.44
CHRNB4-203ENST00000558216 AMIGO3Q86WK7 504 aa17.8■□□□□ 0.44
CHRNB4-203ENST00000558216 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
CHRNB4-203ENST00000558216 KIAA1551Q9HCM1 1747 aa17.78■□□□□ 0.44
CHRNB4-203ENST00000558216 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
CHRNB4-203ENST00000558216 CABP4P57796 275 aa17.78■□□□□ 0.44
CHRNB4-203ENST00000558216 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
CHRNB4-203ENST00000558216 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
CHRNB4-203ENST00000558216 FCHSD2O94868 740 aa17.77■□□□□ 0.44
CHRNB4-203ENST00000558216 KDM6AO15550 1401 aaPredicted RBP17.76■□□□□ 0.43
CHRNB4-203ENST00000558216 KIF3CO14782 793 aa17.76■□□□□ 0.43
CHRNB4-203ENST00000558216 MTHFSDQ2M296 383 aaKnown RBP17.76■□□□□ 0.43
CHRNB4-203ENST00000558216 SMIM5Q71RC9 77 aa17.76■□□□□ 0.43
CHRNB4-203ENST00000558216 KIF13BQ9NQT8 1826 aa17.76■□□□□ 0.43
CHRNB4-203ENST00000558216 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
CHRNB4-203ENST00000558216 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
CHRNB4-203ENST00000558216 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
CHRNB4-203ENST00000558216 MYBBP1AQ9BQG0 1328 aaKnown RBP17.74■□□□□ 0.43
CHRNB4-203ENST00000558216 ZNF316A6NFI3 1004 aaPredicted RBP17.74■□□□□ 0.43
CHRNB4-203ENST00000558216 PRKAR2BP31323 418 aa17.74■□□□□ 0.43
CHRNB4-203ENST00000558216 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
CHRNB4-203ENST00000558216 NEFMP07197 916 aa17.73■□□□□ 0.43
CHRNB4-203ENST00000558216 SIK1P57059 783 aa17.73■□□□□ 0.43
CHRNB4-203ENST00000558216 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
CHRNB4-203ENST00000558216 ATG3Q9NT62 314 aa17.73■□□□□ 0.43
CHRNB4-203ENST00000558216 ASAP1Q9ULH1 1129 aa17.73■□□□□ 0.43
CHRNB4-203ENST00000558216 RNMTO43148 476 aaKnown RBP17.72■□□□□ 0.43
CHRNB4-203ENST00000558216 PHF14O94880 888 aa17.72■□□□□ 0.43
CHRNB4-203ENST00000558216 NFATC2IPQ8NCF5 419 aa17.72■□□□□ 0.43
CHRNB4-203ENST00000558216 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
CHRNB4-203ENST00000558216 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
CHRNB4-203ENST00000558216 AK7Q96M32 723 aa17.71■□□□□ 0.43
CHRNB4-203ENST00000558216 SLC52A2Q9HAB3 445 aa17.71■□□□□ 0.43
CHRNB4-203ENST00000558216 BRCA1P38398 1863 aaKnown RBP17.71■□□□□ 0.43
CHRNB4-203ENST00000558216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.7■□□□□ 0.42
CHRNB4-203ENST00000558216 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
CHRNB4-203ENST00000558216 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
CHRNB4-203ENST00000558216 PRKRIP1Q9H875 184 aaPredicted RBP17.69■□□□□ 0.42
CHRNB4-203ENST00000558216 LGR6Q9HBX8 967 aa17.69■□□□□ 0.42
CHRNB4-203ENST00000558216 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
CHRNB4-203ENST00000558216 APLP1P51693 650 aa17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 TEFQ10587 303 aa17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 DNAJC5GQ8N7S2 189 aa17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 RTF1Q92541 710 aaKnown RBP17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 RBM42Q9BTD8 480 aaKnown RBP17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 MRC1P22897 1456 aa17.67■□□□□ 0.42
CHRNB4-203ENST00000558216 HTATSF1O43719 755 aaKnown RBP17.66■□□□□ 0.42
CHRNB4-203ENST00000558216 SSFA2P28290 1259 aa17.66■□□□□ 0.42
CHRNB4-203ENST00000558216 PCNTO95613 3336 aa17.65■□□□□ 0.42
CHRNB4-203ENST00000558216 ARFGEF1Q9Y6D6 1849 aa17.64■□□□□ 0.41
CHRNB4-203ENST00000558216 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
CHRNB4-203ENST00000558216 ITPK1Q13572 414 aa17.64■□□□□ 0.41
CHRNB4-203ENST00000558216 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
CHRNB4-203ENST00000558216 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
CHRNB4-203ENST00000558216 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
CHRNB4-203ENST00000558216 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
CHRNB4-203ENST00000558216 ADAMTS7Q9UKP4 1686 aa17.63■□□□□ 0.41
CHRNB4-203ENST00000558216 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
CHRNB4-203ENST00000558216 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
CHRNB4-203ENST00000558216 C4AP0C0L4 1744 aa17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 GNPATO15228 680 aa17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 TOMM70O94826 608 aa17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 MMP10P09238 476 aa17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 WDR43Q15061 677 aaKnown RBP eCLIP17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 NMRK2Q9NPI5 230 aa17.62■□□□□ 0.41
CHRNB4-203ENST00000558216 C10orf71Q711Q0 1435 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms