RNA–Protein interactions for RNA: ENST00000558056.1

TNFAIP2-202, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-202ENST00000558056 FHDC1Q9C0D6 1143 aaPredicted RBP22.19■■□□□ 1.14
TNFAIP2-202ENST00000558056 ATG3Q9NT62 314 aa22.19■■□□□ 1.14
TNFAIP2-202ENST00000558056 ATP6V1AP38606 617 aa22.18■■□□□ 1.14
TNFAIP2-202ENST00000558056 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
TNFAIP2-202ENST00000558056 PHF14O94880 888 aa22.17■■□□□ 1.14
TNFAIP2-202ENST00000558056 RBM42Q9BTD8 480 aaKnown RBP22.17■■□□□ 1.14
TNFAIP2-202ENST00000558056 VIRMAQ69YN4 1812 aaKnown RBP22.17■■□□□ 1.14
TNFAIP2-202ENST00000558056 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
TNFAIP2-202ENST00000558056 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
TNFAIP2-202ENST00000558056 UBR3Q6ZT12 1888 aa22.16■■□□□ 1.14
TNFAIP2-202ENST00000558056 LINC00116Q8NCU8 138 aa22.16■■□□□ 1.14
TNFAIP2-202ENST00000558056 ITPK1Q13572 414 aa22.15■■□□□ 1.14
TNFAIP2-202ENST00000558056 AKAP4Q5JQC9 854 aa22.15■■□□□ 1.14
TNFAIP2-202ENST00000558056 MSL1Q68DK7 614 aa22.15■■□□□ 1.14
TNFAIP2-202ENST00000558056 FLAD1Q8NFF5 587 aa22.15■■□□□ 1.14
TNFAIP2-202ENST00000558056 CFAP53Q96M91 514 aa22.15■■□□□ 1.14
TNFAIP2-202ENST00000558056 SYT17Q9BSW7 474 aa22.15■■□□□ 1.14
TNFAIP2-202ENST00000558056 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.14
TNFAIP2-202ENST00000558056 SMIM5Q71RC9 77 aa22.13■■□□□ 1.13
TNFAIP2-202ENST00000558056 NFATC2IPQ8NCF5 419 aa22.13■■□□□ 1.13
TNFAIP2-202ENST00000558056 GNPATO15228 680 aa22.12■■□□□ 1.13
TNFAIP2-202ENST00000558056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.11■■□□□ 1.13
TNFAIP2-202ENST00000558056 RALBP1Q15311 655 aa22.11■■□□□ 1.13
TNFAIP2-202ENST00000558056 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
TNFAIP2-202ENST00000558056 AMIGO3Q86WK7 504 aa22.11■■□□□ 1.13
TNFAIP2-202ENST00000558056 PTCD1O75127 700 aaKnown RBP22.1■■□□□ 1.13
TNFAIP2-202ENST00000558056 PPP2R1AP30153 589 aa22.1■■□□□ 1.13
TNFAIP2-202ENST00000558056 LGR6Q9HBX8 967 aa22.09■■□□□ 1.13
TNFAIP2-202ENST00000558056 ZNF831Q5JPB2 1677 aa22.08■■□□□ 1.13
TNFAIP2-202ENST00000558056 SSFA2P28290 1259 aa22.08■■□□□ 1.13
TNFAIP2-202ENST00000558056 SLC4A9Q96Q91 983 aa22.08■■□□□ 1.13
TNFAIP2-202ENST00000558056 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
TNFAIP2-202ENST00000558056 COL5A3P25940 1745 aaPredicted RBP22.08■■□□□ 1.12
TNFAIP2-202ENST00000558056 RNMTO43148 476 aaKnown RBP22.07■■□□□ 1.12
TNFAIP2-202ENST00000558056 SLC52A2Q9HAB3 445 aa22.07■■□□□ 1.12
TNFAIP2-202ENST00000558056 NUDCQ9Y266 331 aa22.07■■□□□ 1.12
TNFAIP2-202ENST00000558056 MAP3K5Q99683 1374 aa22.06■■□□□ 1.12
TNFAIP2-202ENST00000558056 U2AF1L5P0DN76 240 aaPredicted RBP22.04■■□□□ 1.12
TNFAIP2-202ENST00000558056 PRKAR2BP31323 418 aa22.04■■□□□ 1.12
TNFAIP2-202ENST00000558056 U2AF1Q01081 240 aaKnown RBP eCLIP22.04■■□□□ 1.12
TNFAIP2-202ENST00000558056 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
TNFAIP2-202ENST00000558056 RTCBQ9Y3I0 505 aaKnown RBP22.04■■□□□ 1.12
TNFAIP2-202ENST00000558056 MRC1P22897 1456 aa22.03■■□□□ 1.12
TNFAIP2-202ENST00000558056 TJP1Q07157 1748 aa22.03■■□□□ 1.12
TNFAIP2-202ENST00000558056 MYH14Q7Z406 1995 aaKnown RBP22.02■■□□□ 1.12
TNFAIP2-202ENST00000558056 YY1P25490 414 aa22.02■■□□□ 1.12
TNFAIP2-202ENST00000558056 SLC39A6Q13433 755 aa22.02■■□□□ 1.12
TNFAIP2-202ENST00000558056 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
TNFAIP2-202ENST00000558056 CNTNAP4Q9C0A0 1308 aa22.02■■□□□ 1.12
TNFAIP2-202ENST00000558056 ADAMTS7Q9UKP4 1686 aa22.01■■□□□ 1.11
TNFAIP2-202ENST00000558056 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
TNFAIP2-202ENST00000558056 ANP32CO43423 234 aa22.01■■□□□ 1.11
TNFAIP2-202ENST00000558056 TRAPPC3LQ5T215 181 aa22.01■■□□□ 1.11
TNFAIP2-202ENST00000558056 NLGN2Q8NFZ4 835 aa22.01■■□□□ 1.11
TNFAIP2-202ENST00000558056 RSPH6AQ9H0K4 717 aa22.01■■□□□ 1.11
TNFAIP2-202ENST00000558056 UTRNP46939 3433 aa22■■□□□ 1.11
TNFAIP2-202ENST00000558056 RC3H1Q5TC82 1133 aaKnown RBP22■■□□□ 1.11
TNFAIP2-202ENST00000558056 CRKLP46109 303 aaKnown RBP21.99■■□□□ 1.11
TNFAIP2-202ENST00000558056 GPR162Q16538 588 aa21.99■■□□□ 1.11
TNFAIP2-202ENST00000558056 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
TNFAIP2-202ENST00000558056 MYBBP1AQ9BQG0 1328 aaKnown RBP21.99■■□□□ 1.11
TNFAIP2-202ENST00000558056 TEFQ10587 303 aa21.98■■□□□ 1.11
TNFAIP2-202ENST00000558056 RPS6KA4O75676 772 aa21.97■■□□□ 1.11
TNFAIP2-202ENST00000558056 RFC4P35249 363 aa21.97■■□□□ 1.11
TNFAIP2-202ENST00000558056 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
TNFAIP2-202ENST00000558056 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
TNFAIP2-202ENST00000558056 CICQ96RK0 1608 aaPredicted RBP21.97■■□□□ 1.11
TNFAIP2-202ENST00000558056 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
TNFAIP2-202ENST00000558056 ADRA2BP18089 450 aa21.96■■□□□ 1.11
TNFAIP2-202ENST00000558056 DNAJC10Q8IXB1 793 aa21.96■■□□□ 1.11
TNFAIP2-202ENST00000558056 TTC5Q8N0Z6 440 aa21.96■■□□□ 1.11
TNFAIP2-202ENST00000558056 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
TNFAIP2-202ENST00000558056 IL17REQ8NFR9 667 aa21.95■■□□□ 1.1
TNFAIP2-202ENST00000558056 GOLGB1Q14789 3259 aaKnown RBP21.95■■□□□ 1.1
TNFAIP2-202ENST00000558056 CHD4Q14839 1912 aa21.94■■□□□ 1.1
TNFAIP2-202ENST00000558056 FCHSD2O94868 740 aa21.94■■□□□ 1.1
TNFAIP2-202ENST00000558056 SIPA1L3O60292 1781 aaPredicted RBP21.94■■□□□ 1.1
TNFAIP2-202ENST00000558056 UBR2Q8IWV8 1755 aa21.94■■□□□ 1.1
TNFAIP2-202ENST00000558056 MMP10P09238 476 aa21.93■■□□□ 1.1
TNFAIP2-202ENST00000558056 CD2APQ9Y5K6 639 aa21.93■■□□□ 1.1
TNFAIP2-202ENST00000558056 CCDC87Q9NVE4 849 aa21.92■■□□□ 1.1
TNFAIP2-202ENST00000558056 NEFMP07197 916 aa21.91■■□□□ 1.1
TNFAIP2-202ENST00000558056 INTS5Q6P9B9 1019 aaKnown RBP21.91■■□□□ 1.1
TNFAIP2-202ENST00000558056 NLGN1Q8N2Q7 840 aa21.91■■□□□ 1.1
TNFAIP2-202ENST00000558056 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
TNFAIP2-202ENST00000558056 CYP19A1P11511 503 aaPredicted RBP21.9■■□□□ 1.1
TNFAIP2-202ENST00000558056 GYS1P13807 737 aa21.9■■□□□ 1.1
TNFAIP2-202ENST00000558056 SRP68Q9UHB9 627 aaKnown RBP21.9■■□□□ 1.1
TNFAIP2-202ENST00000558056 ZNF790Q6PG37 636 aa21.89■■□□□ 1.09
TNFAIP2-202ENST00000558056 CEMIPQ8WUJ3 1361 aa21.88■■□□□ 1.09
TNFAIP2-202ENST00000558056 MCM10Q7L590 875 aa21.88■■□□□ 1.09
TNFAIP2-202ENST00000558056 VSIG10Q8N0Z9 540 aa21.88■■□□□ 1.09
TNFAIP2-202ENST00000558056 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
TNFAIP2-202ENST00000558056 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
TNFAIP2-202ENST00000558056 WWC3Q9ULE0 1092 aa21.87■■□□□ 1.09
TNFAIP2-202ENST00000558056 USP42Q9H9J4 1324 aaKnown RBP21.86■■□□□ 1.09
TNFAIP2-202ENST00000558056 YBX3P16989 372 aaKnown RBP eCLIP21.86■■□□□ 1.09
TNFAIP2-202ENST00000558056 DCTN1Q14203 1278 aa21.86■■□□□ 1.09
TNFAIP2-202ENST00000558056 CCDC184Q52MB2 194 aa21.86■■□□□ 1.09
TNFAIP2-202ENST00000558056 ZBTB1Q9Y2K1 713 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms