RNA–Protein interactions for RNA: ENST00000558033.5

ALDH1A3-204, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 3

Gene ALDH1A3, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-204ENST00000558033 UBR3Q6ZT12 1888 aa26.53■■□□□ 1.84
ALDH1A3-204ENST00000558033 MTHFSDQ2M296 383 aaKnown RBP26.52■■□□□ 1.84
ALDH1A3-204ENST00000558033 VIRMAQ69YN4 1812 aaKnown RBP26.52■■□□□ 1.84
ALDH1A3-204ENST00000558033 SLC4A9Q96Q91 983 aa26.52■■□□□ 1.84
ALDH1A3-204ENST00000558033 ATP6V1AP38606 617 aa26.51■■□□□ 1.83
ALDH1A3-204ENST00000558033 NFATC2IPQ8NCF5 419 aa26.51■■□□□ 1.83
ALDH1A3-204ENST00000558033 SMIM5Q71RC9 77 aa26.5■■□□□ 1.83
ALDH1A3-204ENST00000558033 CFAP53Q96M91 514 aa26.5■■□□□ 1.83
ALDH1A3-204ENST00000558033 LGR6Q9HBX8 967 aa26.5■■□□□ 1.83
ALDH1A3-204ENST00000558033 MSH5O43196 834 aa26.49■■□□□ 1.83
ALDH1A3-204ENST00000558033 HMGB2P26583 209 aaKnown RBP26.49■■□□□ 1.83
ALDH1A3-204ENST00000558033 AK7Q96M32 723 aa26.49■■□□□ 1.83
ALDH1A3-204ENST00000558033 ARXQ96QS3 562 aa26.49■■□□□ 1.83
ALDH1A3-204ENST00000558033 FHDC1Q9C0D6 1143 aaPredicted RBP26.49■■□□□ 1.83
ALDH1A3-204ENST00000558033 ZNF831Q5JPB2 1677 aa26.49■■□□□ 1.83
ALDH1A3-204ENST00000558033 ADAMTS7Q9UKP4 1686 aa26.48■■□□□ 1.83
ALDH1A3-204ENST00000558033 RNMTO43148 476 aaKnown RBP26.47■■□□□ 1.83
ALDH1A3-204ENST00000558033 RBM42Q9BTD8 480 aaKnown RBP26.47■■□□□ 1.83
ALDH1A3-204ENST00000558033 MRC1P22897 1456 aa26.47■■□□□ 1.83
ALDH1A3-204ENST00000558033 UTRNP46939 3433 aa26.46■■□□□ 1.83
ALDH1A3-204ENST00000558033 COL5A3P25940 1745 aaPredicted RBP26.45■■□□□ 1.83
ALDH1A3-204ENST00000558033 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
ALDH1A3-204ENST00000558033 SYT17Q9BSW7 474 aa26.45■■□□□ 1.82
ALDH1A3-204ENST00000558033 SLC52A2Q9HAB3 445 aa26.45■■□□□ 1.82
ALDH1A3-204ENST00000558033 PHF14O94880 888 aa26.44■■□□□ 1.82
ALDH1A3-204ENST00000558033 FLAD1Q8NFF5 587 aa26.44■■□□□ 1.82
ALDH1A3-204ENST00000558033 RSPH6AQ9H0K4 717 aa26.44■■□□□ 1.82
ALDH1A3-204ENST00000558033 GOLGB1Q14789 3259 aaKnown RBP26.43■■□□□ 1.82
ALDH1A3-204ENST00000558033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.43■■□□□ 1.82
ALDH1A3-204ENST00000558033 PTCD1O75127 700 aaKnown RBP26.43■■□□□ 1.82
ALDH1A3-204ENST00000558033 POLD1P28340 1107 aa26.43■■□□□ 1.82
ALDH1A3-204ENST00000558033 GNPATO15228 680 aa26.42■■□□□ 1.82
ALDH1A3-204ENST00000558033 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
ALDH1A3-204ENST00000558033 PRKAR2BP31323 418 aa26.41■■□□□ 1.82
ALDH1A3-204ENST00000558033 NUDCQ9Y266 331 aa26.41■■□□□ 1.82
ALDH1A3-204ENST00000558033 MAP3K5Q99683 1374 aa26.41■■□□□ 1.82
ALDH1A3-204ENST00000558033 MYH14Q7Z406 1995 aaKnown RBP26.4■■□□□ 1.82
ALDH1A3-204ENST00000558033 TJP1Q07157 1748 aa26.4■■□□□ 1.82
ALDH1A3-204ENST00000558033 SSFA2P28290 1259 aa26.4■■□□□ 1.82
ALDH1A3-204ENST00000558033 U2AF1L5P0DN76 240 aaPredicted RBP26.39■■□□□ 1.82
ALDH1A3-204ENST00000558033 U2AF1Q01081 240 aaKnown RBP eCLIP26.39■■□□□ 1.82
ALDH1A3-204ENST00000558033 DDX10Q13206 875 aaKnown RBP26.39■■□□□ 1.82
ALDH1A3-204ENST00000558033 CICQ96RK0 1608 aaPredicted RBP26.39■■□□□ 1.81
ALDH1A3-204ENST00000558033 GAS2L2Q8NHY3 880 aa26.38■■□□□ 1.81
ALDH1A3-204ENST00000558033 SLC39A6Q13433 755 aa26.37■■□□□ 1.81
ALDH1A3-204ENST00000558033 CNTNAP4Q9C0A0 1308 aa26.37■■□□□ 1.81
ALDH1A3-204ENST00000558033 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
ALDH1A3-204ENST00000558033 GNAT3A8MTJ3 354 aa26.36■■□□□ 1.81
ALDH1A3-204ENST00000558033 RC3H1Q5TC82 1133 aaKnown RBP26.36■■□□□ 1.81
ALDH1A3-204ENST00000558033 IL17REQ8NFR9 667 aa26.36■■□□□ 1.81
ALDH1A3-204ENST00000558033 KLHL34Q8N239 644 aa26.35■■□□□ 1.81
ALDH1A3-204ENST00000558033 SIPA1L3O60292 1781 aaPredicted RBP26.34■■□□□ 1.81
ALDH1A3-204ENST00000558033 FCHSD2O94868 740 aa26.33■■□□□ 1.81
ALDH1A3-204ENST00000558033 RTCBQ9Y3I0 505 aaKnown RBP26.33■■□□□ 1.81
ALDH1A3-204ENST00000558033 UBR2Q8IWV8 1755 aa26.33■■□□□ 1.8
ALDH1A3-204ENST00000558033 CRKLP46109 303 aaKnown RBP26.32■■□□□ 1.8
ALDH1A3-204ENST00000558033 NLGN2Q8NFZ4 835 aa26.31■■□□□ 1.8
ALDH1A3-204ENST00000558033 RPS6KA4O75676 772 aa26.3■■□□□ 1.8
ALDH1A3-204ENST00000558033 DNAJC10Q8IXB1 793 aa26.3■■□□□ 1.8
ALDH1A3-204ENST00000558033 C4AP0C0L4 1744 aa26.3■■□□□ 1.8
ALDH1A3-204ENST00000558033 CEMIPQ8WUJ3 1361 aa26.3■■□□□ 1.8
ALDH1A3-204ENST00000558033 TRAPPC3LQ5T215 181 aa26.29■■□□□ 1.8
ALDH1A3-204ENST00000558033 ARHGEF1Q92888 912 aaKnown RBP26.29■■□□□ 1.8
ALDH1A3-204ENST00000558033 DCAF8L1A6NGE4 600 aa26.28■■□□□ 1.8
ALDH1A3-204ENST00000558033 TEFQ10587 303 aa26.28■■□□□ 1.8
ALDH1A3-204ENST00000558033 RALBP1Q15311 655 aa26.28■■□□□ 1.8
ALDH1A3-204ENST00000558033 ADRA2BP18089 450 aa26.27■■□□□ 1.8
ALDH1A3-204ENST00000558033 INTS5Q6P9B9 1019 aaKnown RBP26.27■■□□□ 1.8
ALDH1A3-204ENST00000558033 CYP19A1P11511 503 aaPredicted RBP26.24■■□□□ 1.79
ALDH1A3-204ENST00000558033 ZNF790Q6PG37 636 aa26.23■■□□□ 1.79
ALDH1A3-204ENST00000558033 MCM10Q7L590 875 aa26.23■■□□□ 1.79
ALDH1A3-204ENST00000558033 CCDC87Q9NVE4 849 aa26.23■■□□□ 1.79
ALDH1A3-204ENST00000558033 GYS1P13807 737 aa26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 RFC4P35249 363 aa26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 TTC5Q8N0Z6 440 aa26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 VSIG10Q8N0Z9 540 aa26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 ZNF496Q96IT1 587 aaPredicted RBP26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 PLEKHF1Q96S99 279 aa26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 DLG5Q8TDM6 1919 aa26.22■■□□□ 1.79
ALDH1A3-204ENST00000558033 MMP10P09238 476 aa26.21■■□□□ 1.79
ALDH1A3-204ENST00000558033 DCTN1Q14203 1278 aa26.21■■□□□ 1.79
ALDH1A3-204ENST00000558033 KCNQ3O43525 872 aa26.2■■□□□ 1.78
ALDH1A3-204ENST00000558033 ZEB1P37275 1124 aaPredicted RBP26.2■■□□□ 1.78
ALDH1A3-204ENST00000558033 SRP68Q9UHB9 627 aaKnown RBP26.2■■□□□ 1.78
ALDH1A3-204ENST00000558033 CD2APQ9Y5K6 639 aa26.2■■□□□ 1.78
ALDH1A3-204ENST00000558033 SOS1Q07889 1333 aaPredicted RBP26.19■■□□□ 1.78
ALDH1A3-204ENST00000558033 MYBBP1AQ9BQG0 1328 aaKnown RBP26.19■■□□□ 1.78
ALDH1A3-204ENST00000558033 ZBTB1Q9Y2K1 713 aa26.19■■□□□ 1.78
ALDH1A3-204ENST00000558033 HEG1Q9ULI3 1381 aa26.19■■□□□ 1.78
ALDH1A3-204ENST00000558033 NLGN1Q8N2Q7 840 aa26.18■■□□□ 1.78
ALDH1A3-204ENST00000558033 RTF1Q92541 710 aaKnown RBP26.18■■□□□ 1.78
ALDH1A3-204ENST00000558033 USP42Q9H9J4 1324 aaKnown RBP26.17■■□□□ 1.78
ALDH1A3-204ENST00000558033 BTBD11A6QL63 1104 aa26.17■■□□□ 1.78
ALDH1A3-204ENST00000558033 YY1P25490 414 aa26.17■■□□□ 1.78
ALDH1A3-204ENST00000558033 GPR162Q16538 588 aa26.17■■□□□ 1.78
ALDH1A3-204ENST00000558033 HTATSF1O43719 755 aaKnown RBP26.16■■□□□ 1.78
ALDH1A3-204ENST00000558033 PELP1Q8IZL8 1130 aaKnown RBP26.16■■□□□ 1.78
ALDH1A3-204ENST00000558033 FKBP8Q14318 412 aa26.14■■□□□ 1.78
ALDH1A3-204ENST00000558033 FMNL2Q96PY5 1086 aa26.14■■□□□ 1.78
ALDH1A3-204ENST00000558033 COL15A1P39059 1388 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms