RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 ZNF530Q6P9A1 599 aaPredicted RBP17.48■□□□□ 0.39
RDH11-211ENST00000557726 ATG3Q9NT62 314 aa17.48■□□□□ 0.39
RDH11-211ENST00000557726 KNSTRNQ9Y448 316 aa17.48■□□□□ 0.39
RDH11-211ENST00000557726 DCAF5Q96JK2 942 aa17.47■□□□□ 0.39
RDH11-211ENST00000557726 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
RDH11-211ENST00000557726 PLEKHG2Q9H7P9 1386 aa17.47■□□□□ 0.39
RDH11-211ENST00000557726 ERVV-2B6SEH9 535 aa17.46■□□□□ 0.39
RDH11-211ENST00000557726 C1QTNF8P60827 252 aa17.46■□□□□ 0.39
RDH11-211ENST00000557726 AMOTQ4VCS5 1084 aa17.46■□□□□ 0.39
RDH11-211ENST00000557726 UTRNP46939 3433 aa17.45■□□□□ 0.38
RDH11-211ENST00000557726 GIGYF1O75420 1035 aaPredicted RBP17.45■□□□□ 0.38
RDH11-211ENST00000557726 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
RDH11-211ENST00000557726 CABP4P57796 275 aa17.44■□□□□ 0.38
RDH11-211ENST00000557726 C1orf141Q5JVX7 400 aa17.44■□□□□ 0.38
RDH11-211ENST00000557726 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
RDH11-211ENST00000557726 AEBP1Q8IUX7 1158 aa17.43■□□□□ 0.38
RDH11-211ENST00000557726 RTCBQ9Y3I0 505 aaKnown RBP17.43■□□□□ 0.38
RDH11-211ENST00000557726 MTHFSP49914 203 aa17.42■□□□□ 0.38
RDH11-211ENST00000557726 TRAPPC3LQ5T215 181 aa17.42■□□□□ 0.38
RDH11-211ENST00000557726 SULT6B1Q6IMI4 303 aa17.42■□□□□ 0.38
RDH11-211ENST00000557726 KDRP35968 1356 aa17.4■□□□□ 0.38
RDH11-211ENST00000557726 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
RDH11-211ENST00000557726 MMP10P09238 476 aa17.4■□□□□ 0.38
RDH11-211ENST00000557726 SLC4A9Q96Q91 983 aa17.4■□□□□ 0.38
RDH11-211ENST00000557726 PTCD1O75127 700 aaKnown RBP17.39■□□□□ 0.37
RDH11-211ENST00000557726 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
RDH11-211ENST00000557726 ZNF831Q5JPB2 1677 aa17.39■□□□□ 0.37
RDH11-211ENST00000557726 NLGN1Q8N2Q7 840 aa17.38■□□□□ 0.37
RDH11-211ENST00000557726 NFATC2IPQ8NCF5 419 aa17.38■□□□□ 0.37
RDH11-211ENST00000557726 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
RDH11-211ENST00000557726 ADRA2BP18089 450 aa17.37■□□□□ 0.37
RDH11-211ENST00000557726 IL13P35225 146 aa17.37■□□□□ 0.37
RDH11-211ENST00000557726 RFC4P35249 363 aa17.37■□□□□ 0.37
RDH11-211ENST00000557726 ARHGEF1Q92888 912 aaKnown RBP17.37■□□□□ 0.37
RDH11-211ENST00000557726 COL5A3P25940 1745 aaPredicted RBP17.37■□□□□ 0.37
RDH11-211ENST00000557726 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
RDH11-211ENST00000557726 RPS6KA4O75676 772 aa17.36■□□□□ 0.37
RDH11-211ENST00000557726 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
RDH11-211ENST00000557726 MYH14Q7Z406 1995 aaKnown RBP17.36■□□□□ 0.37
RDH11-211ENST00000557726 KIF7Q2M1P5 1343 aa17.36■□□□□ 0.37
RDH11-211ENST00000557726 GPBP1L1Q9HC44 474 aaPredicted RBP17.35■□□□□ 0.37
RDH11-211ENST00000557726 CICQ96RK0 1608 aaPredicted RBP17.35■□□□□ 0.37
RDH11-211ENST00000557726 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
RDH11-211ENST00000557726 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
RDH11-211ENST00000557726 PARP3Q9Y6F1 533 aa17.34■□□□□ 0.37
RDH11-211ENST00000557726 N4BP2Q86UW6 1770 aaPredicted RBP17.33■□□□□ 0.37
RDH11-211ENST00000557726 GYS1P13807 737 aa17.33■□□□□ 0.36
RDH11-211ENST00000557726 CRKLP46109 303 aaKnown RBP17.33■□□□□ 0.36
RDH11-211ENST00000557726 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
RDH11-211ENST00000557726 CCDC87Q9NVE4 849 aa17.33■□□□□ 0.36
RDH11-211ENST00000557726 KIF13BQ9NQT8 1826 aa17.33■□□□□ 0.36
RDH11-211ENST00000557726 GOLGB1Q14789 3259 aaKnown RBP17.32■□□□□ 0.36
RDH11-211ENST00000557726 HMOX1P09601 288 aa17.32■□□□□ 0.36
RDH11-211ENST00000557726 TGFB2P61812 414 aa17.32■□□□□ 0.36
RDH11-211ENST00000557726 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
RDH11-211ENST00000557726 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
RDH11-211ENST00000557726 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
RDH11-211ENST00000557726 BCS1LQ9Y276 419 aa17.31■□□□□ 0.36
RDH11-211ENST00000557726 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
RDH11-211ENST00000557726 VIRMAQ69YN4 1812 aaKnown RBP17.31■□□□□ 0.36
RDH11-211ENST00000557726 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
RDH11-211ENST00000557726 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
RDH11-211ENST00000557726 ADCY9O60503 1353 aa17.29■□□□□ 0.36
RDH11-211ENST00000557726 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
RDH11-211ENST00000557726 SLC52A2Q9HAB3 445 aa17.29■□□□□ 0.36
RDH11-211ENST00000557726 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
RDH11-211ENST00000557726 TJP1Q07157 1748 aa17.29■□□□□ 0.36
RDH11-211ENST00000557726 C10orf71Q711Q0 1435 aa17.29■□□□□ 0.36
RDH11-211ENST00000557726 RNMTO43148 476 aaKnown RBP17.28■□□□□ 0.36
RDH11-211ENST00000557726 DPEP1P16444 411 aa17.28■□□□□ 0.36
RDH11-211ENST00000557726 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
RDH11-211ENST00000557726 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
RDH11-211ENST00000557726 FCHSD2O94868 740 aa17.27■□□□□ 0.36
RDH11-211ENST00000557726 DNAJC10Q8IXB1 793 aa17.27■□□□□ 0.36
RDH11-211ENST00000557726 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
RDH11-211ENST00000557726 ZPR1O75312 459 aa17.26■□□□□ 0.35
RDH11-211ENST00000557726 SLC39A6Q13433 755 aa17.26■□□□□ 0.35
RDH11-211ENST00000557726 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
RDH11-211ENST00000557726 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
RDH11-211ENST00000557726 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
RDH11-211ENST00000557726 FKBP8Q14318 412 aa17.25■□□□□ 0.35
RDH11-211ENST00000557726 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
RDH11-211ENST00000557726 BRCA1P38398 1863 aaKnown RBP17.23■□□□□ 0.35
RDH11-211ENST00000557726 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
RDH11-211ENST00000557726 MRC1P22897 1456 aa17.23■□□□□ 0.35
RDH11-211ENST00000557726 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
RDH11-211ENST00000557726 DDR1Q08345 913 aa17.22■□□□□ 0.35
RDH11-211ENST00000557726 USPL1Q5W0Q7 1092 aa17.22■□□□□ 0.35
RDH11-211ENST00000557726 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.35
RDH11-211ENST00000557726 TTC5Q8N0Z6 440 aa17.21■□□□□ 0.35
RDH11-211ENST00000557726 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
RDH11-211ENST00000557726 KCNA3P22001 575 aa17.2■□□□□ 0.34
RDH11-211ENST00000557726 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
RDH11-211ENST00000557726 KCPQ6ZWJ8 1503 aa17.2■□□□□ 0.34
RDH11-211ENST00000557726 COL15A1P39059 1388 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 POLRMTO00411 1230 aaKnown RBP17.19■□□□□ 0.34
RDH11-211ENST00000557726 HSPA6P17066 643 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 CANXP27824 592 aaKnown RBP17.19■□□□□ 0.34
RDH11-211ENST00000557726 TM4SF1P30408 202 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms