RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 HOXC9P31274 260 aa13.48□□□□□ -0.25
PABPN1-208ENST00000557702 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
PABPN1-208ENST00000557702 HDGFL2Q7Z4V5 671 aaPredicted RBP13.48□□□□□ -0.25
PABPN1-208ENST00000557702 PARP3Q9Y6F1 533 aa13.48□□□□□ -0.25
PABPN1-208ENST00000557702 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
PABPN1-208ENST00000557702 NBPF6Q5VWK0 638 aa13.47□□□□□ -0.25
PABPN1-208ENST00000557702 PIGBQ92521 554 aa13.47□□□□□ -0.25
PABPN1-208ENST00000557702 NBPF4Q96M43 638 aa13.47□□□□□ -0.25
PABPN1-208ENST00000557702 MAP3K19Q56UN5 1328 aa13.46□□□□□ -0.25
PABPN1-208ENST00000557702 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
PABPN1-208ENST00000557702 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
PABPN1-208ENST00000557702 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
PABPN1-208ENST00000557702 MON2Q7Z3U7 1717 aa13.45□□□□□ -0.26
PABPN1-208ENST00000557702 USHBP1Q8N6Y0 703 aa13.45□□□□□ -0.26
PABPN1-208ENST00000557702 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
PABPN1-208ENST00000557702 RGS19P49795 217 aa13.44□□□□□ -0.26
PABPN1-208ENST00000557702 LBX1P52954 281 aa13.44□□□□□ -0.26
PABPN1-208ENST00000557702 ITPK1Q13572 414 aa13.44□□□□□ -0.26
PABPN1-208ENST00000557702 EDC4Q6P2E9 1401 aaKnown RBP13.44□□□□□ -0.26
PABPN1-208ENST00000557702 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
PABPN1-208ENST00000557702 CD163L1Q9NR16 1453 aa13.43□□□□□ -0.26
PABPN1-208ENST00000557702 CYP27B1O15528 508 aa13.43□□□□□ -0.26
PABPN1-208ENST00000557702 GYS1P13807 737 aa13.43□□□□□ -0.26
PABPN1-208ENST00000557702 LMNB1P20700 586 aa13.43□□□□□ -0.26
PABPN1-208ENST00000557702 SBF1O95248 1867 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 CCDC85CA6NKD9 419 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 FBLN1P23142 703 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 RFC4P35249 363 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 RASSF7Q02833 373 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 ARHGEF1Q92888 912 aaKnown RBP13.42□□□□□ -0.26
PABPN1-208ENST00000557702 COG3Q96JB2 828 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 TERF2IPQ9NYB0 399 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 CNTNAP1P78357 1384 aa13.42□□□□□ -0.26
PABPN1-208ENST00000557702 ADRA2BP18089 450 aa13.41□□□□□ -0.26
PABPN1-208ENST00000557702 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
PABPN1-208ENST00000557702 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
PABPN1-208ENST00000557702 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
PABPN1-208ENST00000557702 RGPD2P0DJD1 1756 aa13.4□□□□□ -0.26
PABPN1-208ENST00000557702 POTECB2RU33 542 aa13.4□□□□□ -0.26
PABPN1-208ENST00000557702 CHRNA5P30532 468 aa13.4□□□□□ -0.26
PABPN1-208ENST00000557702 CHADLQ6NUI6 762 aa13.4□□□□□ -0.26
PABPN1-208ENST00000557702 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
PABPN1-208ENST00000557702 C4AP0C0L4 1744 aa13.39□□□□□ -0.27
PABPN1-208ENST00000557702 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
PABPN1-208ENST00000557702 ITGB4P16144 1822 aa13.39□□□□□ -0.27
PABPN1-208ENST00000557702 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
PABPN1-208ENST00000557702 SMG6Q86US8 1419 aaKnown RBP13.39□□□□□ -0.27
PABPN1-208ENST00000557702 VEGFBP49765 207 aa13.38□□□□□ -0.27
PABPN1-208ENST00000557702 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
PABPN1-208ENST00000557702 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
PABPN1-208ENST00000557702 HSPA8P11142 646 aaKnown RBP13.37□□□□□ -0.27
PABPN1-208ENST00000557702 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
PABPN1-208ENST00000557702 A0A1W2PP64 1363 aa13.36□□□□□ -0.27
PABPN1-208ENST00000557702 RPS6KA4O75676 772 aa13.36□□□□□ -0.27
PABPN1-208ENST00000557702 RRS1Q15050 365 aaKnown RBP13.36□□□□□ -0.27
PABPN1-208ENST00000557702 ATG3Q9NT62 314 aa13.36□□□□□ -0.27
PABPN1-208ENST00000557702 ROCK2O75116 1388 aaKnown RBP13.35□□□□□ -0.27
PABPN1-208ENST00000557702 MAP2K1Q02750 393 aaPredicted RBP13.35□□□□□ -0.27
PABPN1-208ENST00000557702 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
PABPN1-208ENST00000557702 TMEM88BA6NKF7 163 aa13.34□□□□□ -0.27
PABPN1-208ENST00000557702 CNTNAP4Q9C0A0 1308 aa13.34□□□□□ -0.27
PABPN1-208ENST00000557702 POTEIP0CG38 1075 aa13.33□□□□□ -0.28
PABPN1-208ENST00000557702 POTEJP0CG39 1038 aa13.33□□□□□ -0.28
PABPN1-208ENST00000557702 DDR1Q08345 913 aa13.33□□□□□ -0.28
PABPN1-208ENST00000557702 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
PABPN1-208ENST00000557702 PASKQ96RG2 1323 aa13.33□□□□□ -0.28
PABPN1-208ENST00000557702 FKBP8Q14318 412 aa13.32□□□□□ -0.28
PABPN1-208ENST00000557702 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
PABPN1-208ENST00000557702 CFAP44Q96MT7 982 aa13.32□□□□□ -0.28
PABPN1-208ENST00000557702 PDE4DIPQ5VU43 2346 aa13.31□□□□□ -0.28
PABPN1-208ENST00000557702 TTLL6Q8N841 843 aa13.31□□□□□ -0.28
PABPN1-208ENST00000557702 L3MBTL2Q969R5 705 aa13.31□□□□□ -0.28
PABPN1-208ENST00000557702 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
PABPN1-208ENST00000557702 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
PABPN1-208ENST00000557702 INSRP06213 1382 aa13.31□□□□□ -0.28
PABPN1-208ENST00000557702 POLRMTO00411 1230 aaKnown RBP13.3□□□□□ -0.28
PABPN1-208ENST00000557702 DEFB115Q30KQ5 88 aa13.3□□□□□ -0.28
PABPN1-208ENST00000557702 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
PABPN1-208ENST00000557702 LDHDQ86WU2 507 aa13.3□□□□□ -0.28
PABPN1-208ENST00000557702 KDRP35968 1356 aa13.3□□□□□ -0.28
PABPN1-208ENST00000557702 NFKBIEO00221 500 aa13.29□□□□□ -0.28
PABPN1-208ENST00000557702 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
PABPN1-208ENST00000557702 PUS7Q96PZ0 661 aaKnown RBP13.29□□□□□ -0.28
PABPN1-208ENST00000557702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.284e-16■■□□□ 12.7
PABPN1-208ENST00000557702 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
PABPN1-208ENST00000557702 IQCA1LA6NCM1 817 aa13.28□□□□□ -0.28
PABPN1-208ENST00000557702 RASSF10A6NK89 507 aa13.28□□□□□ -0.28
PABPN1-208ENST00000557702 TM4SF1P30408 202 aa13.28□□□□□ -0.28
PABPN1-208ENST00000557702 BEGAINQ9BUH8 593 aa13.28□□□□□ -0.28
PABPN1-208ENST00000557702 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
PABPN1-208ENST00000557702 DDNO94850 711 aaPredicted RBP13.27□□□□□ -0.29
PABPN1-208ENST00000557702 PHKG2P15735 406 aa13.27□□□□□ -0.29
PABPN1-208ENST00000557702 CCDC88AQ3V6T2 1871 aa13.27□□□□□ -0.29
PABPN1-208ENST00000557702 ITGBL1O95965 494 aaPredicted RBP13.26□□□□□ -0.29
PABPN1-208ENST00000557702 FLT4P35916 1363 aa13.26□□□□□ -0.29
PABPN1-208ENST00000557702 CRKLP46109 303 aaKnown RBP13.26□□□□□ -0.29
PABPN1-208ENST00000557702 VIRMAQ69YN4 1812 aaKnown RBP13.26□□□□□ -0.29
PABPN1-208ENST00000557702 TIAM2Q8IVF5 1701 aa13.26□□□□□ -0.29
PABPN1-208ENST00000557702 ERVV-2B6SEH9 535 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms