RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ZSCAN10Q96SZ4 725 aaPredicted RBP10.29□□□□□ -0.76
GPHN-215ENST00000557654 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
GPHN-215ENST00000557654 ERBB4Q15303 1308 aa10.28□□□□□ -0.76
GPHN-215ENST00000557654 RFX1P22670 979 aa10.27□□□□□ -0.77
GPHN-215ENST00000557654 PHKA2P46019 1235 aa10.27□□□□□ -0.77
GPHN-215ENST00000557654 NBPF10Q6P3W6 841 aaKnown RBP10.27□□□□□ -0.77
GPHN-215ENST00000557654 TRIM50Q86XT4 487 aa10.27□□□□□ -0.77
GPHN-215ENST00000557654 NBPF15Q8N660 670 aa10.27□□□□□ -0.77
GPHN-215ENST00000557654 TPCN2Q8NHX9 752 aa10.27□□□□□ -0.77
GPHN-215ENST00000557654 ZNF594Q96JF6 807 aaPredicted RBP10.27□□□□□ -0.77
GPHN-215ENST00000557654 DNAAF2Q9NVR5 837 aaKnown RBP10.26□□□□□ -0.77
GPHN-215ENST00000557654 ZNF358Q9NW07 568 aa10.26□□□□□ -0.77
GPHN-215ENST00000557654 USP3Q9Y6I4 520 aa10.26□□□□□ -0.77
GPHN-215ENST00000557654 SPATA31C2B4DYI2 1134 aa10.25□□□□□ -0.77
GPHN-215ENST00000557654 WASLO00401 505 aaPredicted RBP10.25□□□□□ -0.77
GPHN-215ENST00000557654 CDCA8Q53HL2 280 aa10.25□□□□□ -0.77
GPHN-215ENST00000557654 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
GPHN-215ENST00000557654 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
GPHN-215ENST00000557654 TMEM214Q6NUQ4 689 aaKnown RBP10.25□□□□□ -0.77
GPHN-215ENST00000557654 NPAS3Q8IXF0 933 aa10.25□□□□□ -0.77
GPHN-215ENST00000557654 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
GPHN-215ENST00000557654 RASA1P20936 1047 aa10.24□□□□□ -0.77
GPHN-215ENST00000557654 ATP1A2P50993 1020 aa10.24□□□□□ -0.77
GPHN-215ENST00000557654 SMTNP53814 917 aa10.24□□□□□ -0.77
GPHN-215ENST00000557654 C4orf17Q53FE4 359 aa10.24□□□□□ -0.77
GPHN-215ENST00000557654 TAS1R3Q7RTX0 852 aa10.24□□□□□ -0.77
GPHN-215ENST00000557654 CUEDC1Q9NWM3 386 aaPredicted RBP10.24□□□□□ -0.77
GPHN-215ENST00000557654 ITGA6P23229 1130 aa10.23□□□□□ -0.77
GPHN-215ENST00000557654 CRTC2Q53ET0 693 aaPredicted RBP10.23□□□□□ -0.77
GPHN-215ENST00000557654 SLC4A9Q96Q91 983 aa10.23□□□□□ -0.77
GPHN-215ENST00000557654 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
GPHN-215ENST00000557654 SFI1A8K8P3 1242 aa10.22□□□□□ -0.77
GPHN-215ENST00000557654 DKK1O94907 266 aa10.22□□□□□ -0.77
GPHN-215ENST00000557654 GNASQ5JWF2 1037 aa10.22□□□□□ -0.77
GPHN-215ENST00000557654 PPARGC1BQ86YN6 1023 aaKnown RBP10.22□□□□□ -0.77
GPHN-215ENST00000557654 GAS2L1Q99501 681 aaPredicted RBP10.22□□□□□ -0.77
GPHN-215ENST00000557654 TIMMDC1Q9NPL8 285 aa10.22□□□□□ -0.77
GPHN-215ENST00000557654 CDC14CA4D256 554 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 A6NJY4 79 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 TBCELQ5QJ74 424 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 TNS4Q8IZW8 715 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 LARGE2Q8N3Y3 721 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 RHBDD1Q8TEB9 315 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 IRF7Q92985 503 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 VRTNQ9H8Y1 702 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
GPHN-215ENST00000557654 GTF2E1P29083 439 aaPredicted RBP10.2□□□□□ -0.78
GPHN-215ENST00000557654 GMPRP36959 345 aa10.2□□□□□ -0.78
GPHN-215ENST00000557654 MTFR1Q15390 333 aa10.2□□□□□ -0.78
GPHN-215ENST00000557654 RIPOR1Q6ZS17 1223 aa10.2□□□□□ -0.78
GPHN-215ENST00000557654 SIX5Q8N196 739 aa10.2□□□□□ -0.78
GPHN-215ENST00000557654 VWA5B2Q8N398 1253 aa10.2□□□□□ -0.78
GPHN-215ENST00000557654 GPR161Q8N6U8 529 aaKnown RBP10.2□□□□□ -0.78
GPHN-215ENST00000557654 IQSEC3Q9UPP2 1182 aaPredicted RBP10.2□□□□□ -0.78
GPHN-215ENST00000557654 BACH1O14867 736 aa10.19□□□□□ -0.78
GPHN-215ENST00000557654 LGR5O75473 907 aa10.19□□□□□ -0.78
GPHN-215ENST00000557654 PLA2G4AP47712 749 aa10.19□□□□□ -0.78
GPHN-215ENST00000557654 PTK7Q13308 1070 aa10.19□□□□□ -0.78
GPHN-215ENST00000557654 LARP1Q6PKG0 1096 aaKnown RBP10.19□□□□□ -0.78
GPHN-215ENST00000557654 TSEN2Q8NCE0 465 aaKnown RBP10.19□□□□□ -0.78
GPHN-215ENST00000557654 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
GPHN-215ENST00000557654 DYRK1BQ9Y463 629 aa10.19□□□□□ -0.78
GPHN-215ENST00000557654 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L15C9J2P7 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L13C9JLJ4 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L12C9JPN9 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L11C9JVI0 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L21D6R901 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L18D6R9N7 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L22D6RA61 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L17D6RBQ6 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L19D6RCP7 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L20D6RJB6 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 EPHA4P54764 986 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 USP17L24Q0WX57 530 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 CCDC97Q96F63 343 aaPredicted RBP10.18□□□□□ -0.78
GPHN-215ENST00000557654 PARP3Q9Y6F1 533 aa10.18□□□□□ -0.78
GPHN-215ENST00000557654 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
GPHN-215ENST00000557654 DPYDQ12882 1025 aa10.17□□□□□ -0.78
GPHN-215ENST00000557654 WDR44Q5JSH3 913 aa10.17□□□□□ -0.78
GPHN-215ENST00000557654 CCDC82Q8N4S0 544 aa10.17□□□□□ -0.78
GPHN-215ENST00000557654 SCHIP1Q9P0W5 487 aaPredicted RBP10.17□□□□□ -0.78
GPHN-215ENST00000557654 CDK2AP1O14519 115 aa10.16□□□□□ -0.78
GPHN-215ENST00000557654 DBN1Q16643 649 aa10.16□□□□□ -0.78
GPHN-215ENST00000557654 SLC9A9Q8IVB4 645 aa10.16□□□□□ -0.78
GPHN-215ENST00000557654 CABP1Q9NZU7 370 aa10.16□□□□□ -0.78
GPHN-215ENST00000557654 FAM196BA6NMK8 535 aa10.15□□□□□ -0.78
GPHN-215ENST00000557654 FOXK2Q01167 660 aa10.15□□□□□ -0.78
GPHN-215ENST00000557654 ZDHHC1Q8WTX9 485 aa10.15□□□□□ -0.78
GPHN-215ENST00000557654 NANOS1Q8WY41 292 aaKnown RBP10.15□□□□□ -0.78
GPHN-215ENST00000557654 ZNF837Q96EG3 531 aaPredicted RBP10.15□□□□□ -0.78
GPHN-215ENST00000557654 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.78
GPHN-215ENST00000557654 TSPAN10Q9H1Z9 355 aaPredicted RBP10.15□□□□□ -0.78
GPHN-215ENST00000557654 F11P03951 625 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 THBS1P07996 1170 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 MSX1P28360 303 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 SEC13P55735 322 aa10.14□□□□□ -0.79
GPHN-215ENST00000557654 SV2AQ7L0J3 742 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms