RNA–Protein interactions for RNA: ENST00000557510.5

NPC2-209, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 1 (best) BASIC

Gene NPC2, Length 1,029 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-209ENST00000557510 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
NPC2-209ENST00000557510 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
NPC2-209ENST00000557510 UBR3Q6ZT12 1888 aa12.53□□□□□ -0.4
NPC2-209ENST00000557510 AMIGO3Q86WK7 504 aa12.53□□□□□ -0.4
NPC2-209ENST00000557510 ZNF784Q8NCA9 323 aaPredicted RBP12.53□□□□□ -0.4
NPC2-209ENST00000557510 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
NPC2-209ENST00000557510 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
NPC2-209ENST00000557510 C4BP0C0L5 1744 aa12.53□□□□□ -0.4
NPC2-209ENST00000557510 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
NPC2-209ENST00000557510 TNNT2P45379 298 aaPredicted RBP12.52□□□□□ -0.41
NPC2-209ENST00000557510 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
NPC2-209ENST00000557510 SMIM5Q71RC9 77 aa12.52□□□□□ -0.41
NPC2-209ENST00000557510 EYA1Q99502 592 aa12.52□□□□□ -0.41
NPC2-209ENST00000557510 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
NPC2-209ENST00000557510 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
NPC2-209ENST00000557510 POLD1P28340 1107 aa12.51□□□□□ -0.41
NPC2-209ENST00000557510 PIGBQ92521 554 aa12.51□□□□□ -0.41
NPC2-209ENST00000557510 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
NPC2-209ENST00000557510 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
NPC2-209ENST00000557510 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
NPC2-209ENST00000557510 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
NPC2-209ENST00000557510 PRR29P0C7W0 189 aa12.49□□□□□ -0.41
NPC2-209ENST00000557510 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
NPC2-209ENST00000557510 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
NPC2-209ENST00000557510 GPR162Q16538 588 aa12.49□□□□□ -0.41
NPC2-209ENST00000557510 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
NPC2-209ENST00000557510 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.413e-8■■■□□ 18.3
NPC2-209ENST00000557510 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
NPC2-209ENST00000557510 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
NPC2-209ENST00000557510 PANK3Q9H999 370 aa12.47□□□□□ -0.41
NPC2-209ENST00000557510 ASAP1Q9ULH1 1129 aa12.47□□□□□ -0.41
NPC2-209ENST00000557510 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
NPC2-209ENST00000557510 PHKG2P15735 406 aa12.46□□□□□ -0.41
NPC2-209ENST00000557510 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.41
NPC2-209ENST00000557510 ITPK1Q13572 414 aa12.46□□□□□ -0.41
NPC2-209ENST00000557510 SMARCC1Q92922 1105 aaPredicted RBP12.46□□□□□ -0.41
NPC2-209ENST00000557510 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
NPC2-209ENST00000557510 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
NPC2-209ENST00000557510 RGL2O15211 777 aa12.45□□□□□ -0.42
NPC2-209ENST00000557510 PHF14O94880 888 aa12.45□□□□□ -0.42
NPC2-209ENST00000557510 NUBP1P53384 320 aa12.45□□□□□ -0.42
NPC2-209ENST00000557510 SIK1P57059 783 aa12.45□□□□□ -0.42
NPC2-209ENST00000557510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.45□□□□□ -0.42
NPC2-209ENST00000557510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
NPC2-209ENST00000557510 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
NPC2-209ENST00000557510 AK7Q96M32 723 aa12.44□□□□□ -0.42
NPC2-209ENST00000557510 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
NPC2-209ENST00000557510 CIZ1Q9ULV3 898 aaPredicted RBP12.44□□□□□ -0.42
NPC2-209ENST00000557510 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
NPC2-209ENST00000557510 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
NPC2-209ENST00000557510 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
NPC2-209ENST00000557510 SLC4A9Q96Q91 983 aa12.43□□□□□ -0.42
NPC2-209ENST00000557510 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
NPC2-209ENST00000557510 KDM6AO15550 1401 aaPredicted RBP12.43□□□□□ -0.42
NPC2-209ENST00000557510 KDRP35968 1356 aa12.43□□□□□ -0.42
NPC2-209ENST00000557510 FLAD1Q8NFF5 587 aa12.42□□□□□ -0.42
NPC2-209ENST00000557510 CCER1Q8TC90 406 aaPredicted RBP12.42□□□□□ -0.42
NPC2-209ENST00000557510 GNPATO15228 680 aa12.41□□□□□ -0.42
NPC2-209ENST00000557510 ATP6V1AP38606 617 aa12.41□□□□□ -0.42
NPC2-209ENST00000557510 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
NPC2-209ENST00000557510 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
NPC2-209ENST00000557510 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
NPC2-209ENST00000557510 MORC1Q86VD1 984 aa12.4□□□□□ -0.42
NPC2-209ENST00000557510 CD2APQ9Y5K6 639 aa12.4□□□□□ -0.42
NPC2-209ENST00000557510 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
NPC2-209ENST00000557510 C4AP0C0L4 1744 aa12.4□□□□□ -0.43
NPC2-209ENST00000557510 KIAA1551Q9HCM1 1747 aa12.4□□□□□ -0.43
NPC2-209ENST00000557510 SCN11AQ9UI33 1791 aa12.39□□□□□ -0.43
NPC2-209ENST00000557510 SSFA2P28290 1259 aa12.39□□□□□ -0.43
NPC2-209ENST00000557510 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
NPC2-209ENST00000557510 PLEKHG2Q9H7P9 1386 aa12.39□□□□□ -0.43
NPC2-209ENST00000557510 KIF13BQ9NQT8 1826 aa12.39□□□□□ -0.43
NPC2-209ENST00000557510 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
NPC2-209ENST00000557510 TJP1Q07157 1748 aa12.38□□□□□ -0.43
NPC2-209ENST00000557510 C1QTNF8P60827 252 aa12.38□□□□□ -0.43
NPC2-209ENST00000557510 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
NPC2-209ENST00000557510 GRIN3BO60391 1043 aa12.37□□□□□ -0.43
NPC2-209ENST00000557510 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
NPC2-209ENST00000557510 SULT6B1Q6IMI4 303 aa12.37□□□□□ -0.43
NPC2-209ENST00000557510 DCAF5Q96JK2 942 aa12.37□□□□□ -0.43
NPC2-209ENST00000557510 CICQ96RK0 1608 aaPredicted RBP12.37□□□□□ -0.43
NPC2-209ENST00000557510 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
NPC2-209ENST00000557510 CENPBP07199 599 aaPredicted RBP12.36□□□□□ -0.43
NPC2-209ENST00000557510 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
NPC2-209ENST00000557510 IL13P35225 146 aa12.36□□□□□ -0.43
NPC2-209ENST00000557510 ATP10DQ9P241 1426 aa12.36□□□□□ -0.43
NPC2-209ENST00000557510 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
NPC2-209ENST00000557510 MMP10P09238 476 aa12.35□□□□□ -0.43
NPC2-209ENST00000557510 CABP4P57796 275 aa12.35□□□□□ -0.43
NPC2-209ENST00000557510 KNSTRNQ9Y448 316 aa12.35□□□□□ -0.43
NPC2-209ENST00000557510 ADCY9O60503 1353 aa12.34□□□□□ -0.43
NPC2-209ENST00000557510 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
NPC2-209ENST00000557510 GIGYF1O75420 1035 aaPredicted RBP12.34□□□□□ -0.43
NPC2-209ENST00000557510 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
NPC2-209ENST00000557510 MTHFSP49914 203 aa12.34□□□□□ -0.43
NPC2-209ENST00000557510 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
NPC2-209ENST00000557510 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
NPC2-209ENST00000557510 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
NPC2-209ENST00000557510 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
NPC2-209ENST00000557510 BRCA1P38398 1863 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms