RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 GNPATO15228 680 aa19.5■□□□□ 0.71
SLIRP-210ENST00000557431 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
SLIRP-210ENST00000557431 CICQ96RK0 1608 aaPredicted RBP19.49■□□□□ 0.71
SLIRP-210ENST00000557431 IFNL2Q8IZJ0 200 aa19.48■□□□□ 0.71
SLIRP-210ENST00000557431 ATG3Q9NT62 314 aa19.48■□□□□ 0.71
SLIRP-210ENST00000557431 SSFA2P28290 1259 aa19.47■□□□□ 0.71
SLIRP-210ENST00000557431 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
SLIRP-210ENST00000557431 SCN11AQ9UI33 1791 aa19.47■□□□□ 0.71
SLIRP-210ENST00000557431 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
SLIRP-210ENST00000557431 ADCY9O60503 1353 aa19.46■□□□□ 0.71
SLIRP-210ENST00000557431 SLC4A9Q96Q91 983 aa19.46■□□□□ 0.71
SLIRP-210ENST00000557431 KDRP35968 1356 aa19.45■□□□□ 0.7
SLIRP-210ENST00000557431 TJP1Q07157 1748 aa19.45■□□□□ 0.7
SLIRP-210ENST00000557431 KDM6AO15550 1401 aaPredicted RBP19.44■□□□□ 0.7
SLIRP-210ENST00000557431 RBM42Q9BTD8 480 aaKnown RBP19.44■□□□□ 0.7
SLIRP-210ENST00000557431 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
SLIRP-210ENST00000557431 GPBP1L1Q9HC44 474 aaPredicted RBP19.43■□□□□ 0.7
SLIRP-210ENST00000557431 PXDNLA1KZ92 1463 aa19.42■□□□□ 0.7
SLIRP-210ENST00000557431 MMP10P09238 476 aa19.42■□□□□ 0.7
SLIRP-210ENST00000557431 HSPA5P11021 654 aaKnown RBP19.42■□□□□ 0.7
SLIRP-210ENST00000557431 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
SLIRP-210ENST00000557431 ARFGEF1Q9Y6D6 1849 aa19.41■□□□□ 0.7
SLIRP-210ENST00000557431 PANK3Q9H999 370 aa19.41■□□□□ 0.7
SLIRP-210ENST00000557431 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
SLIRP-210ENST00000557431 HMGB2P26583 209 aaKnown RBP19.38■□□□□ 0.69
SLIRP-210ENST00000557431 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
SLIRP-210ENST00000557431 AFDNP55196 1824 aaKnown RBP19.37■□□□□ 0.69
SLIRP-210ENST00000557431 ADAMTS7Q9UKP4 1686 aa19.37■□□□□ 0.69
SLIRP-210ENST00000557431 A0A0G2JLW4 131 aa19.37■□□□□ 0.69
SLIRP-210ENST00000557431 ARHGEF1Q92888 912 aaKnown RBP19.37■□□□□ 0.69
SLIRP-210ENST00000557431 C10orf71Q711Q0 1435 aa19.36■□□□□ 0.69
SLIRP-210ENST00000557431 PLEKHO1Q53GL0 409 aaPredicted RBP19.36■□□□□ 0.69
SLIRP-210ENST00000557431 TRAPPC3LQ5T215 181 aa19.36■□□□□ 0.69
SLIRP-210ENST00000557431 BCS1LQ9Y276 419 aa19.36■□□□□ 0.69
SLIRP-210ENST00000557431 SBF1O95248 1867 aa19.36■□□□□ 0.69
SLIRP-210ENST00000557431 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
SLIRP-210ENST00000557431 ERVV-2B6SEH9 535 aa19.35■□□□□ 0.69
SLIRP-210ENST00000557431 PTCD1O75127 700 aaKnown RBP19.35■□□□□ 0.69
SLIRP-210ENST00000557431 CABP4P57796 275 aa19.35■□□□□ 0.69
SLIRP-210ENST00000557431 EIF4G2P78344 907 aaKnown RBP eCLIP19.35■□□□□ 0.69
SLIRP-210ENST00000557431 DCAF5Q96JK2 942 aa19.35■□□□□ 0.69
SLIRP-210ENST00000557431 TIMELESSQ9UNS1 1208 aa19.35■□□□□ 0.69
SLIRP-210ENST00000557431 GYS1P13807 737 aa19.34■□□□□ 0.69
SLIRP-210ENST00000557431 SRP68Q9UHB9 627 aaKnown RBP19.34■□□□□ 0.69
SLIRP-210ENST00000557431 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
SLIRP-210ENST00000557431 MORC1Q86VD1 984 aa19.33■□□□□ 0.68
SLIRP-210ENST00000557431 KIF3CO14782 793 aa19.32■□□□□ 0.68
SLIRP-210ENST00000557431 DPEP1P16444 411 aa19.32■□□□□ 0.68
SLIRP-210ENST00000557431 SULT6B1Q6IMI4 303 aa19.32■□□□□ 0.68
SLIRP-210ENST00000557431 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
SLIRP-210ENST00000557431 RPS6KA4O75676 772 aa19.31■□□□□ 0.68
SLIRP-210ENST00000557431 HSP90AB1P08238 724 aaKnown RBP19.31■□□□□ 0.68
SLIRP-210ENST00000557431 RFC4P35249 363 aa19.31■□□□□ 0.68
SLIRP-210ENST00000557431 MTHFSP49914 203 aa19.31■□□□□ 0.68
SLIRP-210ENST00000557431 NFATC2IPQ8NCF5 419 aa19.31■□□□□ 0.68
SLIRP-210ENST00000557431 HSPA6P17066 643 aa19.3■□□□□ 0.68
SLIRP-210ENST00000557431 CRKLP46109 303 aaKnown RBP19.3■□□□□ 0.68
SLIRP-210ENST00000557431 C1orf141Q5JVX7 400 aa19.3■□□□□ 0.68
SLIRP-210ENST00000557431 RC3H1Q5TC82 1133 aaKnown RBP19.3■□□□□ 0.68
SLIRP-210ENST00000557431 NLGN1Q8N2Q7 840 aa19.3■□□□□ 0.68
SLIRP-210ENST00000557431 PLEKHG2Q9H7P9 1386 aa19.3■□□□□ 0.68
SLIRP-210ENST00000557431 FCHSD2O94868 740 aa19.29■□□□□ 0.68
SLIRP-210ENST00000557431 ARHGAP27Q6ZUM4 889 aa19.29■□□□□ 0.68
SLIRP-210ENST00000557431 CCDC87Q9NVE4 849 aa19.29■□□□□ 0.68
SLIRP-210ENST00000557431 PARP3Q9Y6F1 533 aa19.29■□□□□ 0.68
SLIRP-210ENST00000557431 CLSPNQ9HAW4 1339 aa19.28■□□□□ 0.68
SLIRP-210ENST00000557431 TGFB2P61812 414 aa19.28■□□□□ 0.68
SLIRP-210ENST00000557431 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
SLIRP-210ENST00000557431 CACNA1SQ13698 1873 aa19.27■□□□□ 0.68
SLIRP-210ENST00000557431 ADRA2BP18089 450 aa19.27■□□□□ 0.68
SLIRP-210ENST00000557431 DDR1Q08345 913 aa19.27■□□□□ 0.68
SLIRP-210ENST00000557431 FKBP8Q14318 412 aa19.27■□□□□ 0.68
SLIRP-210ENST00000557431 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.67
SLIRP-210ENST00000557431 IL13P35225 146 aa19.26■□□□□ 0.67
SLIRP-210ENST00000557431 DLEC1Q9Y238 1755 aa19.26■□□□□ 0.67
SLIRP-210ENST00000557431 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
SLIRP-210ENST00000557431 HMOX1P09601 288 aa19.25■□□□□ 0.67
SLIRP-210ENST00000557431 KCNA3P22001 575 aa19.25■□□□□ 0.67
SLIRP-210ENST00000557431 DNAJC10Q8IXB1 793 aa19.25■□□□□ 0.67
SLIRP-210ENST00000557431 LGR6Q9HBX8 967 aa19.25■□□□□ 0.67
SLIRP-210ENST00000557431 NMRK2Q9NPI5 230 aa19.25■□□□□ 0.67
SLIRP-210ENST00000557431 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
SLIRP-210ENST00000557431 SLC39A6Q13433 755 aa19.24■□□□□ 0.67
SLIRP-210ENST00000557431 KNSTRNQ9Y448 316 aa19.24■□□□□ 0.67
SLIRP-210ENST00000557431 KCPQ6ZWJ8 1503 aa19.24■□□□□ 0.67
SLIRP-210ENST00000557431 NRXN2Q9P2S2 1712 aa19.23■□□□□ 0.67
SLIRP-210ENST00000557431 CHRNA5P30532 468 aa19.23■□□□□ 0.67
SLIRP-210ENST00000557431 INTS5Q6P9B9 1019 aaKnown RBP19.23■□□□□ 0.67
SLIRP-210ENST00000557431 MRC1P22897 1456 aa19.22■□□□□ 0.67
SLIRP-210ENST00000557431 SIPA1L3O60292 1781 aaPredicted RBP19.22■□□□□ 0.67
SLIRP-210ENST00000557431 ANKRD31Q8N7Z5 1873 aa19.22■□□□□ 0.67
SLIRP-210ENST00000557431 CNGB1Q14028 1251 aaPredicted RBP19.21■□□□□ 0.67
SLIRP-210ENST00000557431 AMER1Q5JTC6 1135 aaPredicted RBP19.21■□□□□ 0.67
SLIRP-210ENST00000557431 C9orf131Q5VYM1 1079 aa19.21■□□□□ 0.67
SLIRP-210ENST00000557431 CCER1Q8TC90 406 aaPredicted RBP19.21■□□□□ 0.67
SLIRP-210ENST00000557431 TIAM2Q8IVF5 1701 aa19.2■□□□□ 0.66
SLIRP-210ENST00000557431 IFFO2Q5TF58 517 aa19.2■□□□□ 0.66
SLIRP-210ENST00000557431 USPL1Q5W0Q7 1092 aa19.2■□□□□ 0.66
SLIRP-210ENST00000557431 SLC52A2Q9HAB3 445 aa19.2■□□□□ 0.66
SLIRP-210ENST00000557431 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms