RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 TJP1Q07157 1748 aa19.25■□□□□ 0.67
LGMN-215ENST00000557315 COL24A1Q17RW2 1714 aa19.25■□□□□ 0.67
LGMN-215ENST00000557315 HSP90AB1P08238 724 aaKnown RBP19.24■□□□□ 0.67
LGMN-215ENST00000557315 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
LGMN-215ENST00000557315 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
LGMN-215ENST00000557315 C1orf141Q5JVX7 400 aa19.24■□□□□ 0.67
LGMN-215ENST00000557315 CCNL1Q9UK58 526 aaPredicted RBP19.24■□□□□ 0.67
LGMN-215ENST00000557315 RNMTO43148 476 aaKnown RBP19.23■□□□□ 0.67
LGMN-215ENST00000557315 AMIGO3Q86WK7 504 aa19.23■□□□□ 0.67
LGMN-215ENST00000557315 KCPQ6ZWJ8 1503 aa19.22■□□□□ 0.67
LGMN-215ENST00000557315 ITPK1Q13572 414 aa19.22■□□□□ 0.67
LGMN-215ENST00000557315 PLEKHF1Q96S99 279 aa19.22■□□□□ 0.67
LGMN-215ENST00000557315 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
LGMN-215ENST00000557315 MYH14Q7Z406 1995 aaKnown RBP19.22■□□□□ 0.67
LGMN-215ENST00000557315 MAP3K5Q99683 1374 aa19.21■□□□□ 0.67
LGMN-215ENST00000557315 FCHSD2O94868 740 aa19.21■□□□□ 0.67
LGMN-215ENST00000557315 NFATC2IPQ8NCF5 419 aa19.21■□□□□ 0.67
LGMN-215ENST00000557315 IL17REQ8NFR9 667 aa19.21■□□□□ 0.67
LGMN-215ENST00000557315 SPON1Q9HCB6 807 aa19.21■□□□□ 0.67
LGMN-215ENST00000557315 STK32BQ9NY57 414 aa19.21■□□□□ 0.67
LGMN-215ENST00000557315 CEMIPQ8WUJ3 1361 aa19.2■□□□□ 0.66
LGMN-215ENST00000557315 LOC102724428A0A0B4J2F2 783 aa19.2■□□□□ 0.66
LGMN-215ENST00000557315 SIK1P57059 783 aa19.2■□□□□ 0.66
LGMN-215ENST00000557315 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
LGMN-215ENST00000557315 PNPLA7Q6ZV29 1317 aa19.2■□□□□ 0.66
LGMN-215ENST00000557315 CABP4P57796 275 aa19.19■□□□□ 0.66
LGMN-215ENST00000557315 LINC00116Q8NCU8 138 aa19.19■□□□□ 0.66
LGMN-215ENST00000557315 SLC52A2Q9HAB3 445 aa19.19■□□□□ 0.66
LGMN-215ENST00000557315 GAS2L2Q8NHY3 880 aa19.18■□□□□ 0.66
LGMN-215ENST00000557315 CCDC184Q52MB2 194 aa19.17■□□□□ 0.66
LGMN-215ENST00000557315 PPP1R1BQ9UD71 204 aaPredicted RBP19.17■□□□□ 0.66
LGMN-215ENST00000557315 SMIM5Q71RC9 77 aa19.16■□□□□ 0.66
LGMN-215ENST00000557315 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
LGMN-215ENST00000557315 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
LGMN-215ENST00000557315 SGIP1Q9BQI5 828 aa19.14■□□□□ 0.65
LGMN-215ENST00000557315 ZBTB7AO95365 584 aa19.13■□□□□ 0.65
LGMN-215ENST00000557315 PTGER2P43116 358 aa19.13■□□□□ 0.65
LGMN-215ENST00000557315 C4AP0C0L4 1744 aa19.13■□□□□ 0.65
LGMN-215ENST00000557315 ATP6V1AP38606 617 aa19.12■□□□□ 0.65
LGMN-215ENST00000557315 DCTN1Q14203 1278 aa19.12■□□□□ 0.65
LGMN-215ENST00000557315 COL23A1Q86Y22 540 aaPredicted RBP19.12■□□□□ 0.65
LGMN-215ENST00000557315 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
LGMN-215ENST00000557315 MCM10Q7L590 875 aa19.11■□□□□ 0.65
LGMN-215ENST00000557315 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
LGMN-215ENST00000557315 PTCD1O75127 700 aaKnown RBP19.1■□□□□ 0.65
LGMN-215ENST00000557315 RBM42Q9BTD8 480 aaKnown RBP19.1■□□□□ 0.65
LGMN-215ENST00000557315 TFCP2L1Q9NZI6 479 aa19.1■□□□□ 0.65
LGMN-215ENST00000557315 KCNQ3O43525 872 aa19.09■□□□□ 0.65
LGMN-215ENST00000557315 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
LGMN-215ENST00000557315 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.64
LGMN-215ENST00000557315 ATF5Q9Y2D1 282 aaPredicted RBP19.08■□□□□ 0.64
LGMN-215ENST00000557315 CNTNAP4Q9C0A0 1308 aa19.07■□□□□ 0.64
LGMN-215ENST00000557315 MTFR1LQ9H019 292 aa19.07■□□□□ 0.64
LGMN-215ENST00000557315 DNAJC10Q8IXB1 793 aa19.06■□□□□ 0.64
LGMN-215ENST00000557315 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
LGMN-215ENST00000557315 THUMPD2Q9BTF0 503 aaKnown RBP19.06■□□□□ 0.64
LGMN-215ENST00000557315 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
LGMN-215ENST00000557315 ZNF496Q96IT1 587 aaPredicted RBP19.05■□□□□ 0.64
LGMN-215ENST00000557315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.04■□□□□ 0.64
LGMN-215ENST00000557315 GNPATO15228 680 aa19.04■□□□□ 0.64
LGMN-215ENST00000557315 YY1P25490 414 aa19.04■□□□□ 0.64
LGMN-215ENST00000557315 TEFQ10587 303 aa19.04■□□□□ 0.64
LGMN-215ENST00000557315 RC3H1Q5TC82 1133 aaKnown RBP19.04■□□□□ 0.64
LGMN-215ENST00000557315 INTS5Q6P9B9 1019 aaKnown RBP19.04■□□□□ 0.64
LGMN-215ENST00000557315 ZNF790Q6PG37 636 aa19.04■□□□□ 0.64
LGMN-215ENST00000557315 AK7Q96M32 723 aa19.04■□□□□ 0.64
LGMN-215ENST00000557315 TMPOP42166 694 aaKnown RBP19.03■□□□□ 0.64
LGMN-215ENST00000557315 CRKLP46109 303 aaKnown RBP19.03■□□□□ 0.64
LGMN-215ENST00000557315 SLC16A10Q8TF71 515 aa19.03■□□□□ 0.64
LGMN-215ENST00000557315 HEG1Q9ULI3 1381 aa19.03■□□□□ 0.64
LGMN-215ENST00000557315 PHF14O94880 888 aa19.02■□□□□ 0.64
LGMN-215ENST00000557315 CYP19A1P11511 503 aaPredicted RBP19.02■□□□□ 0.64
LGMN-215ENST00000557315 SSFA2P28290 1259 aa19.02■□□□□ 0.64
LGMN-215ENST00000557315 RRP7AQ9Y3A4 280 aaKnown RBP19.01■□□□□ 0.63
LGMN-215ENST00000557315 LAMB4A4D0S4 1761 aa19.01■□□□□ 0.63
LGMN-215ENST00000557315 MAPK8IP3Q9UPT6 1336 aa19■□□□□ 0.63
LGMN-215ENST00000557315 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
LGMN-215ENST00000557315 MSL1Q68DK7 614 aa19■□□□□ 0.63
LGMN-215ENST00000557315 VSIG10Q8N0Z9 540 aa19■□□□□ 0.63
LGMN-215ENST00000557315 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
LGMN-215ENST00000557315 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
LGMN-215ENST00000557315 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
LGMN-215ENST00000557315 WDR43Q15061 677 aaKnown RBP eCLIP18.99■□□□□ 0.63
LGMN-215ENST00000557315 RTF1Q92541 710 aaKnown RBP18.99■□□□□ 0.63
LGMN-215ENST00000557315 RUNDC1Q96C34 613 aa18.99■□□□□ 0.63
LGMN-215ENST00000557315 MIS18AQ9NYP9 233 aa18.99■□□□□ 0.63
LGMN-215ENST00000557315 RIPK4P57078 832 aa18.98■□□□□ 0.63
LGMN-215ENST00000557315 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
LGMN-215ENST00000557315 PNNQ9H307 717 aaKnown RBP18.98■□□□□ 0.63
LGMN-215ENST00000557315 ZBTB1Q9Y2K1 713 aa18.98■□□□□ 0.63
LGMN-215ENST00000557315 SOS1Q07889 1333 aaPredicted RBP18.98■□□□□ 0.63
LGMN-215ENST00000557315 ANP32CO43423 234 aa18.97■□□□□ 0.63
LGMN-215ENST00000557315 FLAD1Q8NFF5 587 aa18.97■□□□□ 0.63
LGMN-215ENST00000557315 ARHGEF1Q92888 912 aaKnown RBP18.97■□□□□ 0.63
LGMN-215ENST00000557315 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
LGMN-215ENST00000557315 TTC5Q8N0Z6 440 aa18.96■□□□□ 0.63
LGMN-215ENST00000557315 CCDC87Q9NVE4 849 aa18.96■□□□□ 0.63
LGMN-215ENST00000557315 RTCBQ9Y3I0 505 aaKnown RBP18.96■□□□□ 0.63
LGMN-215ENST00000557315 SCN7AQ01118 1682 aa18.95■□□□□ 0.62
LGMN-215ENST00000557315 HMGB2P26583 209 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms