RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 EYA1Q99502 592 aa12.56□□□□□ -0.4
HNRNPC-227ENST00000556897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.44e-12■■■□□ 16.5
HNRNPC-227ENST00000556897 WASHC2AQ641Q2 1341 aa12.56□□□□□ -0.4
HNRNPC-227ENST00000556897 NPM3O75607 178 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-227ENST00000556897 PHKG2P15735 406 aa12.55□□□□□ -0.4
HNRNPC-227ENST00000556897 ATG3Q9NT62 314 aa12.55□□□□□ -0.4
HNRNPC-227ENST00000556897 PXDNLA1KZ92 1463 aa12.54□□□□□ -0.4
HNRNPC-227ENST00000556897 IFNL2Q8IZJ0 200 aa12.54□□□□□ -0.4
HNRNPC-227ENST00000556897 CICQ96RK0 1608 aaPredicted RBP12.54□□□□□ -0.4
HNRNPC-227ENST00000556897 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
HNRNPC-227ENST00000556897 TRAPPC3LQ5T215 181 aa12.53□□□□□ -0.4
HNRNPC-227ENST00000556897 POTEDQ86YR6 584 aa12.53□□□□□ -0.4
HNRNPC-227ENST00000556897 BCS1LQ9Y276 419 aa12.53□□□□□ -0.4
HNRNPC-227ENST00000556897 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
HNRNPC-227ENST00000556897 TGFB2P61812 414 aa12.52□□□□□ -0.41
HNRNPC-227ENST00000556897 NLGN1Q8N2Q7 840 aa12.52□□□□□ -0.41
HNRNPC-227ENST00000556897 POLKQ9UBT6 870 aa12.52□□□□□ -0.41
HNRNPC-227ENST00000556897 RTCBQ9Y3I0 505 aaKnown RBP12.52□□□□□ -0.41
HNRNPC-227ENST00000556897 KDRP35968 1356 aa12.52□□□□□ -0.41
HNRNPC-227ENST00000556897 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
HNRNPC-227ENST00000556897 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
HNRNPC-227ENST00000556897 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
HNRNPC-227ENST00000556897 KIAA1551Q9HCM1 1747 aa12.51□□□□□ -0.41
HNRNPC-227ENST00000556897 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
HNRNPC-227ENST00000556897 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
HNRNPC-227ENST00000556897 TOMM70O94826 608 aa12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 DPEP1P16444 411 aa12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 TNNT2P45379 298 aaPredicted RBP12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 APLP1P51693 650 aa12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 EIF4A2Q14240 407 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 ARHGEF1Q92888 912 aaKnown RBP12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
HNRNPC-227ENST00000556897 GYS1P13807 737 aa12.49□□□□□ -0.41
HNRNPC-227ENST00000556897 RFC4P35249 363 aa12.49□□□□□ -0.41
HNRNPC-227ENST00000556897 NMRK2Q9NPI5 230 aa12.49□□□□□ -0.41
HNRNPC-227ENST00000556897 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
HNRNPC-227ENST00000556897 CNTNAP4Q9C0A0 1308 aa12.48□□□□□ -0.41
HNRNPC-227ENST00000556897 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
HNRNPC-227ENST00000556897 FCHSD2O94868 740 aa12.48□□□□□ -0.41
HNRNPC-227ENST00000556897 CNKSR2Q8WXI2 1034 aa12.48□□□□□ -0.41
HNRNPC-227ENST00000556897 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
HNRNPC-227ENST00000556897 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
HNRNPC-227ENST00000556897 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
HNRNPC-227ENST00000556897 DNAJC5GQ8N7S2 189 aa12.47□□□□□ -0.41
HNRNPC-227ENST00000556897 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
HNRNPC-227ENST00000556897 C4AP0C0L4 1744 aa12.47□□□□□ -0.41
HNRNPC-227ENST00000556897 HSP90AB1P08238 724 aaKnown RBP12.46□□□□□ -0.41
HNRNPC-227ENST00000556897 CABP4P57796 275 aa12.46□□□□□ -0.41
HNRNPC-227ENST00000556897 POLR3GLQ9BT43 218 aa12.46□□□□□ -0.41
HNRNPC-227ENST00000556897 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 PLEKHG2Q9H7P9 1386 aa12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 ZNF831Q5JPB2 1677 aa12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 PTCD1O75127 700 aaKnown RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 KCNA3P22001 575 aa12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 PLEKHO1Q53GL0 409 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 C9orf131Q5VYM1 1079 aa12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
HNRNPC-227ENST00000556897 PIM2Q9P1W9 311 aa12.44□□□□□ -0.42
HNRNPC-227ENST00000556897 SRP68Q9UHB9 627 aaKnown RBP12.44□□□□□ -0.42
HNRNPC-227ENST00000556897 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 MTHFSP49914 203 aa12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 HTRA3P83110 453 aa12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 DDR1Q08345 913 aa12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 FKBP8Q14318 412 aa12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 AMOTQ4VCS5 1084 aa12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 DALRD3Q5D0E6 543 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-227ENST00000556897 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
HNRNPC-227ENST00000556897 AEBP1Q8IUX7 1158 aa12.42□□□□□ -0.42
HNRNPC-227ENST00000556897 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
HNRNPC-227ENST00000556897 KCPQ6ZWJ8 1503 aa12.42□□□□□ -0.42
HNRNPC-227ENST00000556897 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
HNRNPC-227ENST00000556897 CHRNA5P30532 468 aa12.41□□□□□ -0.42
HNRNPC-227ENST00000556897 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
HNRNPC-227ENST00000556897 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
HNRNPC-227ENST00000556897 KDM2BQ8NHM5 1336 aa12.4□□□□□ -0.42
HNRNPC-227ENST00000556897 WDR90Q96KV7 1748 aa12.4□□□□□ -0.42
HNRNPC-227ENST00000556897 PCNTO95613 3336 aa12.4□□□□□ -0.42
HNRNPC-227ENST00000556897 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
HNRNPC-227ENST00000556897 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-227ENST00000556897 FSTL1Q12841 308 aa12.39□□□□□ -0.43
HNRNPC-227ENST00000556897 INTS5Q6P9B9 1019 aaKnown RBP12.39□□□□□ -0.43
HNRNPC-227ENST00000556897 PANK3Q9H999 370 aa12.39□□□□□ -0.43
HNRNPC-227ENST00000556897 RRAGCQ9HB90 399 aa12.39□□□□□ -0.43
HNRNPC-227ENST00000556897 TJP1Q07157 1748 aa12.38□□□□□ -0.43
HNRNPC-227ENST00000556897 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
HNRNPC-227ENST00000556897 ZPR1O75312 459 aa12.37□□□□□ -0.43
HNRNPC-227ENST00000556897 TM4SF1P30408 202 aa12.37□□□□□ -0.43
HNRNPC-227ENST00000556897 COL13A1Q5TAT6 717 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-227ENST00000556897 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
HNRNPC-227ENST00000556897 DNAJC10Q8IXB1 793 aa12.37□□□□□ -0.43
HNRNPC-227ENST00000556897 JMYQ8N9B5 988 aa12.37□□□□□ -0.43
HNRNPC-227ENST00000556897 SBF1O95248 1867 aa12.36□□□□□ -0.43
HNRNPC-227ENST00000556897 RASSF7Q02833 373 aa12.36□□□□□ -0.43
HNRNPC-227ENST00000556897 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
HNRNPC-227ENST00000556897 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms