RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 GPAMQ9HCL2 828 aa10.24□□□□□ -0.77
HIF1A-209ENST00000556827 HRH3Q9Y5N1 445 aa10.24□□□□□ -0.77
HIF1A-209ENST00000556827 GPR25O00155 361 aa10.23□□□□□ -0.77
HIF1A-209ENST00000556827 F11P03951 625 aa10.23□□□□□ -0.77
HIF1A-209ENST00000556827 SKIP12755 728 aa10.23□□□□□ -0.77
HIF1A-209ENST00000556827 GDF10P55107 478 aa10.23□□□□□ -0.77
HIF1A-209ENST00000556827 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
HIF1A-209ENST00000556827 GTPBP3Q969Y2 492 aaKnown RBP10.23□□□□□ -0.77
HIF1A-209ENST00000556827 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
HIF1A-209ENST00000556827 ALG2Q9H553 416 aa10.22□□□□□ -0.77
HIF1A-209ENST00000556827 A0A1B0GTH6 734 aa10.21□□□□□ -0.77
HIF1A-209ENST00000556827 ADAMTS2O95450 1211 aa10.21□□□□□ -0.77
HIF1A-209ENST00000556827 SCNN1DP51172 638 aa10.21□□□□□ -0.77
HIF1A-209ENST00000556827 GAS6Q14393 721 aa10.21□□□□□ -0.77
HIF1A-209ENST00000556827 EML3Q32P44 896 aa10.21□□□□□ -0.77
HIF1A-209ENST00000556827 C4orf17Q53FE4 359 aa10.21□□□□□ -0.77
HIF1A-209ENST00000556827 NUCKS1Q9H1E3 243 aaKnown RBP10.21□□□□□ -0.77
HIF1A-209ENST00000556827 INHAP05111 366 aa10.2□□□□□ -0.78
HIF1A-209ENST00000556827 SLURP2P0DP57 97 aa10.2□□□□□ -0.78
HIF1A-209ENST00000556827 RHBDD1Q8TEB9 315 aa10.2□□□□□ -0.78
HIF1A-209ENST00000556827 POM121CA8CG34 1229 aa10.19□□□□□ -0.78
HIF1A-209ENST00000556827 SRSF11Q05519 484 aaKnown RBP10.19□□□□□ -0.78
HIF1A-209ENST00000556827 ZNF385CQ66K41 422 aaPredicted RBP10.19□□□□□ -0.78
HIF1A-209ENST00000556827 NFATC2IPQ8NCF5 419 aa10.19□□□□□ -0.78
HIF1A-209ENST00000556827 NOD1Q9Y239 953 aa10.19□□□□□ -0.78
HIF1A-209ENST00000556827 CSB-PGBD3P0DP91 1061 aa10.18□□□□□ -0.78
HIF1A-209ENST00000556827 PSME1Q06323 249 aa10.18□□□□□ -0.78
HIF1A-209ENST00000556827 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
HIF1A-209ENST00000556827 PGBD3Q8N328 593 aa10.18□□□□□ -0.78
HIF1A-209ENST00000556827 WHAMMQ8TF30 809 aa10.18□□□□□ -0.78
HIF1A-209ENST00000556827 MBIPQ9NS73 344 aa10.18□□□□□ -0.78
HIF1A-209ENST00000556827 SERTAD1Q9UHV2 236 aa10.18□□□□□ -0.78
HIF1A-209ENST00000556827 PLA2G4AP47712 749 aa10.17□□□□□ -0.78
HIF1A-209ENST00000556827 NCOA4Q13772 614 aa10.17□□□□□ -0.78
HIF1A-209ENST00000556827 ZMYND15Q9H091 742 aa10.17□□□□□ -0.78
HIF1A-209ENST00000556827 USP17L5A8MUK1 530 aa10.16□□□□□ -0.78
HIF1A-209ENST00000556827 GTF2IP78347 998 aa10.16□□□□□ -0.78
HIF1A-209ENST00000556827 DEPDC4Q8N2C3 294 aa10.16□□□□□ -0.78
HIF1A-209ENST00000556827 RUBCNLQ9H714 662 aa10.16□□□□□ -0.78
HIF1A-209ENST00000556827 LZTS3O60299 673 aaPredicted RBP10.15□□□□□ -0.78
HIF1A-209ENST00000556827 MSX1P28360 303 aa10.15□□□□□ -0.78
HIF1A-209ENST00000556827 SMTNP53814 917 aa10.15□□□□□ -0.78
HIF1A-209ENST00000556827 MAP3K10Q02779 954 aa10.15□□□□□ -0.78
HIF1A-209ENST00000556827 TBC1D9Q6ZT07 1266 aa10.15□□□□□ -0.78
HIF1A-209ENST00000556827 ADAMTS8Q9UP79 889 aa10.15□□□□□ -0.78
HIF1A-209ENST00000556827 IGF1RP08069 1367 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 TMEM229AB2RXF0 380 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 MX2P20592 715 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 EFHC2Q5JST6 749 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 HDGFL1Q5TGJ6 251 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 ADAMTS19Q8TE59 1207 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
HIF1A-209ENST00000556827 NSFL1CQ9UNZ2 370 aaKnown RBP10.14□□□□□ -0.79
HIF1A-209ENST00000556827 PCDHGA11Q9Y5H2 935 aa10.14□□□□□ -0.79
HIF1A-209ENST00000556827 A6NJR5 290 aa10.12□□□□□ -0.79
HIF1A-209ENST00000556827 LYPD4Q6UWN0 246 aa10.12□□□□□ -0.79
HIF1A-209ENST00000556827 PROSER2Q86WR7 435 aaPredicted RBP10.12□□□□□ -0.79
HIF1A-209ENST00000556827 FNBP4Q8N3X1 1017 aaPredicted RBP10.12□□□□□ -0.79
HIF1A-209ENST00000556827 AIDAQ96BJ3 306 aa10.12□□□□□ -0.79
HIF1A-209ENST00000556827 PHF24Q9UPV7 400 aa10.12□□□□□ -0.79
HIF1A-209ENST00000556827 CCDC180Q9P1Z9 1646 aa10.11□□□□□ -0.79
HIF1A-209ENST00000556827 A6NJY4 79 aa10.11□□□□□ -0.79
HIF1A-209ENST00000556827 RNF225M0QZC1 329 aaPredicted RBP10.11□□□□□ -0.79
HIF1A-209ENST00000556827 BACH1O14867 736 aa10.11□□□□□ -0.79
HIF1A-209ENST00000556827 THBS1P07996 1170 aa10.11□□□□□ -0.79
HIF1A-209ENST00000556827 LBRQ14739 615 aaKnown RBP10.11□□□□□ -0.79
HIF1A-209ENST00000556827 USP17L3A6NCW0 530 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 USP17L4A6NCW7 530 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 CELA2BP08218 269 aaPredicted RBP10.1□□□□□ -0.79
HIF1A-209ENST00000556827 NBPF1Q3BBV0 1214 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 USP17L2Q6R6M4 530 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 USP17L1Q7RTZ2 530 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 TRIM50Q86XT4 487 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 SLC4A9Q96Q91 983 aa10.1□□□□□ -0.79
HIF1A-209ENST00000556827 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
HIF1A-209ENST00000556827 MARSP56192 900 aaKnown RBP10.09□□□□□ -0.79
HIF1A-209ENST00000556827 UCN2Q96RP3 112 aa10.09□□□□□ -0.79
HIF1A-209ENST00000556827 CFHR5Q9BXR6 569 aa10.09□□□□□ -0.79
HIF1A-209ENST00000556827 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
HIF1A-209ENST00000556827 CDK2AP1O14519 115 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 ATP9BO43861 1147 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 MTFR1Q15390 333 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.08□□□□□ -0.8
HIF1A-209ENST00000556827 C1orf216Q8TAB5 229 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 CRISPLD1Q9H336 500 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 ENAMQ9NRM1 1142 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 ZNF358Q9NW07 568 aa10.08□□□□□ -0.8
HIF1A-209ENST00000556827 ATP4AP20648 1035 aa10.07□□□□□ -0.8
HIF1A-209ENST00000556827 ATP1A2P50993 1020 aa10.07□□□□□ -0.8
HIF1A-209ENST00000556827 PLEKHM2Q8IWE5 1019 aa10.07□□□□□ -0.8
HIF1A-209ENST00000556827 GLMNQ92990 594 aa10.07□□□□□ -0.8
HIF1A-209ENST00000556827 IQSEC3Q9UPP2 1182 aaPredicted RBP10.07□□□□□ -0.8
HIF1A-209ENST00000556827 USP3Q9Y6I4 520 aa10.07□□□□□ -0.8
HIF1A-209ENST00000556827 TATP17735 454 aaPredicted RBP10.06□□□□□ -0.8
HIF1A-209ENST00000556827 MAP2K3P46734 347 aa10.06□□□□□ -0.8
HIF1A-209ENST00000556827 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
HIF1A-209ENST00000556827 ARSJQ5FYB0 599 aaPredicted RBP10.06□□□□□ -0.8
HIF1A-209ENST00000556827 TPCN2Q8NHX9 752 aa10.06□□□□□ -0.8
HIF1A-209ENST00000556827 ABHD17AQ96GS6 310 aa10.06□□□□□ -0.8
HIF1A-209ENST00000556827 ZNF777Q9ULD5 760 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms